Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048694 Camellia sinensis var. sinensis HOM05D006287 ORTHO05D008192 2.9e-152 543.5 492 100.0
CSS0042508 Camellia sinensis var. sinensis HOM05D006287 ORTHO05D008192 6.2e-78 296.6 270 59.6
Actinidia15687 Actinidia chinensis HOM05D006287 ORTHO05D008192 6.6e-64 250.0 228 61.0
Dinv11617 Davidia involucrata HOM05D006287 ORTHO05D008192 2.0e-60 238.4 234 56.0
Hma1.2p1_0007F.1_g005110 Hydrangea macrophylla HOM05D006287 ORTHO05D008192 1.6e-57 228.8 210 54.3
Cc11_g01810 Coffea canephora HOM05D006287 ORTHO05D008192 2.6e-52 211.5 253 46.2
Haze_21571 Corylus avellana HOM05D006287 ORTHO05D008192 4.4e-52 210.7 260 46.5
Oeu008766.1 Olea europaea HOM05D006287 ORTHO05D008192 9.3e-50 203.0 238 48.7
CiPaw.06G059600 Carya illinoinensis HOM05D006287 ORTHO05D008192 1.7e-48 198.7 234 48.3
Prupe.6G275900 Prunus persica HOM05D006287 ORTHO05D008192 5.8e-44 183.7 248 46.8
CANSAT11G2472 Cannabis sativa HOM05D006287 ORTHO05D008192 1.3e-43 182.6 174 55.2
Thecc.09G149000 Theobroma cacao HOM05D006287 ORTHO05D008192 2.9e-43 181.4 163 55.8
QL08p000602 Quercus lobata HOM05D006287 ORTHO05D008192 8.4e-43 179.9 217 47.9
QL05p049822 Quercus lobata HOM05D006287 ORTHO05D008192 3.2e-42 177.9 175 53.7
Oeu032501.2 Olea europaea HOM05D006287 ORTHO05D008192 5.5e-42 177.2 193 49.2
Nitab4.5_0001669g0010 Nicotiana tabacum HOM05D006287 ORTHO05D008192 4.6e-41 174.1 262 42.7
Cpa.g.sc1.269 Carica papaya HOM05D006287 ORTHO05D008192 8.7e-40 169.9 229 45.9
Nitab4.5_0000151g0190 Nicotiana tabacum HOM05D006287 ORTHO05D008192 1.1e-39 169.5 211 46.4
MSTRG.25851 Avicennia marina HOM05D006287 ORTHO05D008192 7.4e-39 166.8 250 41.2
VMungo0331G1641 Vigna mungo HOM05D006287 ORTHO05D008192 7.4e-39 166.8 208 45.2
CAN.G98.23 Capsicum annuum HOM05D006287 ORTHO05D008192 3.7e-38 164.5 187 48.7
DCAR_006447 Daucus carota HOM05D006287 ORTHO05D008192 1.1e-37 162.9 244 40.6
GSVIVG01035807001 Vitis vinifera HOM05D006287 ORTHO05D008192 1.1e-37 162.9 144 55.6
Nn3g20345 Nelumbo nucifera HOM05D006287 ORTHO05D008192 9.0e-37 159.8 188 48.9
Nn5g27729 Nelumbo nucifera HOM05D006287 ORTHO05D008192 1.5e-36 159.1 283 36.7
PGR142G2973 Punica granatum HOM05D006287 ORTHO05D008192 2.0e-36 158.7 182 42.9
Ciclev10010816m.g Citrus clementina HOM05D006287 ORTHO05D008192 4.5e-36 157.5 253 40.3
Sopen08g021010 Solanum pennellii HOM05D006287 ORTHO05D008192 7.6e-36 156.8 173 46.8
MSTRG.11775 Avicennia marina HOM05D006287 ORTHO05D008192 1.7e-35 155.6 218 39.0
TWI63G1321 Tripterygium wilfordii HOM05D006287 ORTHO05D008192 2.9e-35 154.8 146 51.4
Atru.chr7.2375 Acer truncatum HOM05D006287 ORTHO05D008192 3.8e-35 154.5 257 40.9
Solyc08g067060.2 Solanum lycopersicum HOM05D006287 ORTHO05D008192 4.9e-35 154.1 173 46.2
PGSC0003DMG400023145 Solanum tuberosum HOM05D006287 ORTHO05D008192 1.1e-34 152.9 248 39.9
Lj7C718G17 Lonicera japonica HOM05D006287 ORTHO05D008192 5.5e-34 150.6 196 46.4
Duzib168G0154 Durio zibethinus HOM05D006287 ORTHO05D008192 1.6e-33 149.1 214 43.0
COL.COLO4_23984 Corchorus olitorius HOM05D006287 ORTHO05D008192 2.1e-33 148.7 134 54.5
Psat7g237040 Pisum sativum HOM05D006287 ORTHO05D008192 1.8e-32 145.6 128 50.8
Duzib150G0458 Durio zibethinus HOM05D006287 ORTHO05D008192 3.9e-32 144.4 143 51.0
Aqoxy7G02057 Aquilegia oxysepala HOM05D006287 ORTHO05D008192 1.9e-31 142.1 254 39.4
RcHm_v2.0_Chr7g0216391 Rosa chinensis HOM05D006287 ORTHO05D008192 1.9e-31 142.1 145 49.7
Potri.006G250700 Populus trichocarpa HOM05D006287 ORTHO05D008192 3.3e-31 141.4 199 43.2
Sabra06G0196000 Salix brachista HOM05D001686 ORTHO05D008192 3.3e-31 141.4 198 43.4
Ca_26550_v3 Cicer arietinum L. HOM05D006287 ORTHO05D008192 1.3e-30 139.4 119 54.6
arahy.Tifrunner.gnm1.ann1.VPFI8Q Arachis hypogaea HOM05D006287 ORTHO05D008192 2.1e-30 138.7 175 42.3
MD04G1151000 Malus domestica HOM05D006287 ORTHO05D008192 2.1e-30 138.7 118 58.5
Lalb_Chr07g0185941 Lupinus albus HOM05D006287 ORTHO05D008192 3.7e-30 137.9 167 44.3
Phvul.009G090400 Phaseolus vulgaris HOM05D006287 ORTHO05D008192 3.7e-30 137.9 183 44.8
SGA_v2.0_scaffold22G09931 Striga asiatica HOM05D006287 ORTHO05D008192 3.7e-30 137.9 235 37.9
Glyma.07G068500 Glycine max HOM05D006287 ORTHO05D008192 1.5e-28 132.5 132 48.5
LjContig00081g0002723 Lotus japonicus HOM05D006287 ORTHO05D008192 4.5e-28 131.0 126 46.8
THA.LOC104824237 Tarenaya hassleriana HOM05D006287 ORTHO05D008192 7.6e-28 130.2 166 39.8
Gorai.011G097400 Gossypium raimondii HOM05D006287 ORTHO05D008192 1.0e-27 129.8 183 41.0
Aa31sc33G30 Aethionema arabicum HOM05D006287 ORTHO05D008192 1.7e-27 129.0 164 41.5
ClCG02G013330 Citrullus lanatus HOM05D006287 ORTHO05D008192 2.2e-27 128.6 205 40.0
Lsat_1_v5_gn_6_22161 Lactuca sativa HOM05D006287 ORTHO05D008192 2.2e-27 128.6 188 42.6
A09p47970 Brassica napus HOM05D006287 ORTHO05D008192 1.9e-26 125.6 157 40.8
Peaxi162Scf00341g00062 Petunia axillaris HOM05D006287 ORTHO05D008192 1.9e-26 125.6 217 37.3
Sed0018262 Sechium edule HOM05D006287 ORTHO05D008192 2.5e-26 125.2 205 37.1
TPR.G5606 Trifolium pratense HOM05D006287 ORTHO05D008192 2.5e-26 125.2 191 38.2
CDE03G0083 Ceratophyllum demersum HOM05D006287 ORTHO05D008192 9.3e-26 123.2 166 37.3
MBI08_g04815_MAGBIO Magnolia biondii HOM05D006287 ORTHO05D008192 2.7e-25 121.7 144 45.8
Eucgr.I01690 Eucalyptus grandis HOM05D006287 ORTHO05D008192 4.6e-25 120.9 195 39.5
AUR62015978 Chenopodium quinoa HOM05D006287 ORTHO05D008192 6.1e-25 120.6 232 37.1
Sc25g0000480 Simmondsia chinensis HOM05D006287 ORTHO05D008192 7.9e-25 120.2 208 34.6
HanXRQChr02g0050751 Helianthus annuus HOM05D006287 ORTHO05D008192 1.0e-24 119.8 173 38.7
Medtr4g076540 Medicago truncatula HOM05D006287 ORTHO05D008192 1.0e-24 119.8 182 38.5
BraA09t40252Z Brassica rapa HOM05D006287 ORTHO05D008192 1.3e-24 119.4 157 40.8
FvH4_5g25890 Fragaria vesca HOM05D006287 ORTHO05D008192 1.8e-24 119.0 155 41.3
FAN18G3351 Fragaria x ananassa HOM05D006287 ORTHO05D008192 1.8e-24 119.0 155 41.3
MD12G1164900 Malus domestica HOM05D006287 ORTHO05D008192 2.3e-24 118.6 118 51.7
TPR.G5411 Trifolium pratense HOM05D008207 ORTHO05D010373 6.7e-24 117.1 110 50.0
CARHR164980 Cardamine hirsuta HOM05D006287 ORTHO05D008192 1.1e-23 116.3 203 35.0
ATR0782G042 Amborella trichopoda HOM05D006287 ORTHO05D008192 1.9e-23 115.5 227 30.4
AT2G39230 Arabidopsis thaliana HOM05D006287 ORTHO05D008192 1.9e-23 115.5 216 33.3
BcaB01g00140 Brassica carinata HOM05D006287 ORTHO05D008192 1.9e-23 115.5 160 40.6
DCAR_006446 Daucus carota HOM05D006287 ORTHO05D008192 2.5e-23 115.2 187 36.4
BolC8t50627H Brassica oleracea HOM05D006287 ORTHO05D008192 4.3e-23 114.4 158 39.9
Hund04746 Selenicereus undatus HOM05D006287 ORTHO05D008192 4.3e-23 114.4 139 41.0
Sed0001816 Sechium edule HOM05D006287 ORTHO05D008192 7.4e-23 113.6 131 44.3
AL5G36090 Arabidopsis lyrata HOM05D006287 ORTHO05D008192 9.7e-23 113.2 203 34.5
MELO3C020947.2 Cucumis melo HOM05D006287 ORTHO05D008192 9.7e-23 113.2 133 43.6
AT3G54980 Arabidopsis thaliana HOM05D006287 ORTHO05D008192 1.6e-22 112.5 206 34.5
Nitab4.5_0008089g0010 Nicotiana tabacum HOM05D006287 ORTHO05D008192 2.2e-22 112.1 110 51.8
CsaV3_2G017510 Cucumis sativus L. HOM05D006287 ORTHO05D008192 2.8e-22 111.7 133 42.9
Thhalv10010921m.g Eutrema salsugineum HOM05D006287 ORTHO05D008192 6.3e-22 110.5 208 35.1
BcaNung04649 Brassica carinata HOM05D006287 ORTHO05D008192 2.4e-21 108.6 249 33.7
C08p30210 Brassica napus HOM05D006287 ORTHO05D008192 2.4e-21 108.6 249 33.7
Sp4g21560 Schrenkiella parvula HOM05D006287 ORTHO05D008192 2.4e-21 108.6 218 31.2
SpUn0018_0110 Schrenkiella parvula HOM05D006287 ORTHO05D008192 2.4e-21 108.6 218 31.2
Thhalv10017602m.g Eutrema salsugineum HOM05D006287 ORTHO05D008192 4.1e-21 107.8 165 35.2
AUR62021186 Chenopodium quinoa HOM05D006287 ORTHO05D008192 1.2e-20 106.3 140 41.4
Ah.13g068920 Amaranthus hybridus HOM05D006287 ORTHO05D008192 1.5e-20 105.9 168 39.3
AL4G36540 Arabidopsis lyrata HOM05D006287 ORTHO05D008192 3.4e-20 104.8 183 36.1
Carub.0005s2160 Capsella rubella HOM05D006287 ORTHO05D008192 3.4e-20 104.8 183 38.3
HPP92_023171 Vanilla planifolia HOM05D006287 ORTHO05D008192 3.2e-18 98.2 244 32.8
Carub.0004s2128 Capsella rubella HOM05D006287 ORTHO05D008192 7.2e-18 97.1 132 37.1
CAN.G1030.29 Capsicum annuum HOM05D006287 ORTHO05D008192 2.1e-17 95.5 99 51.5
ATR0782G035 Amborella trichopoda HOM05D006287 ORTHO05D008192 4.6e-17 94.4 209 31.1
RcHm_v2.0_Chr6g0264781 Rosa chinensis HOM05D006287 ORTHO05D008192 1.0e-16 93.2 118 42.4
THA.LOC104809984 Tarenaya hassleriana HOM05D006287 ORTHO05D008192 2.3e-16 92.0 223 32.7
RcHm_v2.0_Chr4g0410561 Rosa chinensis HOM05D006287 ORTHO05D008192 3.0e-16 91.7 121 43.8
MBI01_g07128_MAGBIO Magnolia biondii HOM05D006287 ORTHO05D008192 1.8e-13 82.4 123 41.5
BcaNung04644 Brassica carinata HOM05D006287 ORTHO05D008192 1.5e-12 79.3 196 34.2
AUR62021185 Chenopodium quinoa HOM05D006287 ORTHO05D008192 2.0e-12 79.0 252 28.2
AUR62015977 Chenopodium quinoa HOM05D006287 ORTHO05D008192 4.5e-12 77.8 239 27.2
AT5G59900 Arabidopsis thaliana HOM05D007212 ORTHO05D009094 1.0e-08 66.6 160 31.2
Actinidia34749 Actinidia chinensis HOM05D007426 ORTHO05D009167 2.3e-08 65.5 179 31.8
Nn3g17999 Nelumbo nucifera HOM05D007426 ORTHO05D009167 2.3e-08 65.5 199 28.6
Dinv04907 Davidia involucrata HOM05D007426 ORTHO05D009167 3.9e-08 64.7 184 27.2
Cpa.g.sc190.19 Carica papaya HOM05D007212 ORTHO05D009094 5.1e-08 64.3 162 26.5
Atru.chr11.1049 Acer truncatum HOM05D007496 ORTHO05D009479 6.7e-08 63.9 153 26.8
Sc11g0003960 Simmondsia chinensis HOM05D007426 ORTHO05D009167 6.7e-08 63.9 152 30.3
vmacro17185 Vaccinium macrocarpon HOM05D007496 ORTHO05D009479 6.7e-08 63.9 163 27.6
Aqoxy3G01152 Aquilegia oxysepala HOM05D007358 ORTHO05D009117 8.8e-08 63.5 167 23.4
Ciclev10027786m.g Citrus clementina HOM05D007212 ORTHO05D009094 1.1e-07 63.2 201 27.9
Aqoxy3G03989 Aquilegia oxysepala HOM05D007426 ORTHO05D009167 1.5e-07 62.8 172 29.1
THA.LOC104814860 Tarenaya hassleriana HOM05D007212 ORTHO05D009094 1.5e-07 62.8 219 28.8
GSVIVG01011807001 Vitis vinifera HOM05D000798 ORTHO05D000659 2.6e-07 62.0 177 28.2
vmacro03100 Vaccinium macrocarpon HOM05D007212 ORTHO05D009094 4.4e-07 61.2 205 25.4
COL.COLO4_27514 Corchorus olitorius HOM05D007496 ORTHO05D009479 5.7e-07 60.8 151 27.2
Duzib235G0794 Durio zibethinus HOM05D000424 ORTHO05D000355 5.7e-07 60.8 149 31.5
arahy.Tifrunner.gnm1.ann1.JWX42Q Arachis hypogaea HOM05D000104 ORTHO05D009920 1.3e-06 59.7 167 25.7
SGA_v2.0_scaffold4G02164 Striga asiatica HOM05D007496 ORTHO05D009479 1.3e-06 59.7 155 27.7
Actinidia38410 Actinidia chinensis HOM05D007496 ORTHO05D009479 1.7e-06 59.3 163 27.0
QL01p003061 Quercus lobata HOM05D007426 ORTHO05D009167 1.7e-06 59.3 183 28.4
arahy.Tifrunner.gnm1.ann1.H4NKJU Arachis hypogaea HOM05D000104 ORTHO05D009920 2.2e-06 58.9 167 25.7
BcaC05g26208 Brassica carinata HOM05D007426 ORTHO05D009167 2.8e-06 58.5 182 25.3
Lj3A877T95 Lonicera japonica HOM05D007426 ORTHO05D009167 2.8e-06 58.5 234 26.9
MELO3C035731.2 Cucumis melo HOM05D002890 ORTHO05D009847 3.7e-06 58.2 208 23.1
Potri.001G236800 Populus trichocarpa HOM05D007212 ORTHO05D009094 3.7e-06 58.2 197 25.4
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 3.7e-06 58.2 159 26.4
Ah.16g102100 Amaranthus hybridus HOM05D007347 ORTHO05D009296 4.8e-06 57.8 136 27.2
COL.COLO4_35570 Corchorus olitorius HOM05D002230 ORTHO05D002441 4.8e-06 57.8 205 26.3
MELO3C003888.2 Cucumis melo HOM05D007639 ORTHO05D009509 4.8e-06 57.8 132 31.8
BolC5t30917H Brassica oleracea HOM05D007426 ORTHO05D009167 6.3e-06 57.4 182 24.7
CSS0026781 Camellia sinensis var. sinensis HOM05D007639 ORTHO05D009509 6.3e-06 57.4 136 31.6
C05p22170 Brassica napus HOM05D007426 ORTHO05D009167 8.2e-06 57.0 182 24.7
CsaV3_3G044860 Cucumis sativus L. HOM05D007639 ORTHO05D009509 8.2e-06 57.0 132 31.1
MBI05_g05281_MAGBIO Magnolia biondii HOM05D002890 ORTHO05D009847 8.2e-06 57.0 175 24.0
SGA_v2.0_scaffold169G38601 Striga asiatica HOM05D007496 ORTHO05D009479 8.2e-06 57.0 227 26.4

Acer truncatum (2 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (2 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (3 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (3 genes)
Arachis hypogaea (3 genes)
Avicennia marina (2 genes)
Beta vulgaris (0 genes)
Brassica carinata (4 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (4 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (2 genes)
Coffea canephora (1 genes)
Corchorus olitorius (3 genes)
Corylus avellana (1 genes)
Cucumis melo (3 genes)
Cucumis sativus L. (2 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (3 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (1 genes)
Glycine max (1 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (3 genes)
Malus domestica (2 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (3 genes)
Nicotiana tabacum (3 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (3 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (3 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (2 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (3 genes)
Tarenaya hassleriana (3 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (2 genes)
Zea mays (0 genes)

Program Settings