Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048314 Camellia sinensis var. sinensis HOM05D005404 ORTHO05D006623 1.1e-34 149.4 80 100.0
Rhsim02G0154900 Rhododendron simsii HOM05D005404 ORTHO05D006623 1.7e-14 82.4 75 72.0
Dinv32291 Davidia involucrata HOM05D005404 ORTHO05D006623 2.2e-14 82.0 75 72.0
Duzib235G1537 Durio zibethinus HOM05D005404 ORTHO05D006623 2.2e-14 82.0 75 72.0
FvH4_3g06230 Fragaria vesca HOM05D005404 ORTHO05D006623 2.2e-14 82.0 75 72.0
FAN11G2394 Fragaria x ananassa HOM05D005404 ORTHO05D006623 2.2e-14 82.0 75 72.0
FAN16G2304 Fragaria x ananassa HOM05D005404 ORTHO05D006623 2.2e-14 82.0 75 72.0
FAN25G0636 Fragaria x ananassa HOM05D005404 ORTHO05D006623 2.2e-14 82.0 75 72.0
FAN25G2540 Fragaria x ananassa HOM05D005404 ORTHO05D006623 2.2e-14 82.0 75 72.0
PSO170G1289 Papaver somniferum HOM05D005404 ORTHO05D006623 2.2e-14 82.0 73 68.5
VMungo0251G2631 Vigna mungo HOM05D005404 ORTHO05D006623 2.2e-14 82.0 75 69.3
Cc00_g15980 Coffea canephora HOM05D005404 ORTHO05D006623 2.9e-14 81.6 75 72.0
Lsat_1_v5_gn_1_91580 Lactuca sativa HOM05D005404 ORTHO05D006623 2.9e-14 81.6 75 70.7
Hund21493 Selenicereus undatus HOM05D005404 ORTHO05D006623 2.9e-14 81.6 75 69.3
Atru.chr10.1368 Acer truncatum HOM05D005404 ORTHO05D006623 3.8e-14 81.3 75 70.7
CANSAT35G0205 Cannabis sativa HOM05D005404 ORTHO05D006623 3.8e-14 81.3 75 68.0
COL.COLO4_07492 Corchorus olitorius HOM05D005404 ORTHO05D006623 3.8e-14 81.3 75 70.7
Haze_05531 Corylus avellana HOM05D005404 ORTHO05D006623 3.8e-14 81.3 75 72.0
DCAR_003948 Daucus carota HOM05D005404 ORTHO05D006623 3.8e-14 81.3 75 68.0
Duzib101G0001 Durio zibethinus HOM05D005404 ORTHO05D006623 3.8e-14 81.3 75 70.7
Duzib192G1075 Durio zibethinus HOM05D005404 ORTHO05D006623 3.8e-14 81.3 75 70.7
Gohir.D10G039300 Gossypium hirsutum HOM05D005404 ORTHO05D006623 3.8e-14 81.3 75 72.0
Gorai.011G041300 Gossypium raimondii HOM05D005404 ORTHO05D006623 3.8e-14 81.3 75 72.0
Nn3g20867 Nelumbo nucifera HOM05D005404 ORTHO05D006623 3.8e-14 81.3 75 72.0
GSVIVG01021395001 Vitis vinifera HOM05D005404 ORTHO05D006623 3.8e-14 81.3 75 72.0
Actinidia39556 Actinidia chinensis HOM05D005404 ORTHO05D006623 5.0e-14 80.9 75 70.7
Ciclev10017167m.g Citrus clementina HOM05D005404 ORTHO05D006623 5.0e-14 80.9 75 69.3
DCAR_007905 Daucus carota HOM05D005404 ORTHO05D006623 5.0e-14 80.9 75 69.3
FAN21G0592 Fragaria x ananassa HOM05D005404 ORTHO05D006623 5.0e-14 80.9 75 70.7
Lalb_Chr12g0208831 Lupinus albus HOM05D005404 ORTHO05D006623 5.0e-14 80.9 75 68.0
ECA248G0679 Erigeron canadensis HOM05D005404 ORTHO05D006623 6.5e-14 80.5 75 69.3
CDE02G1967 Ceratophyllum demersum HOM05D005404 ORTHO05D006623 8.5e-14 80.1 75 66.7
CDE08G1548 Ceratophyllum demersum HOM05D005404 ORTHO05D006623 8.5e-14 80.1 75 66.7
HanXRQChr11g0340931 Helianthus annuus HOM05D005404 ORTHO05D006623 8.5e-14 80.1 75 69.3
Thecc.06G156200 Theobroma cacao HOM05D005404 ORTHO05D006623 8.5e-14 80.1 75 69.3
TWI53G0717 Tripterygium wilfordii HOM05D005404 ORTHO05D006623 8.5e-14 80.1 75 68.0
Eucgr.E02375 Eucalyptus grandis HOM05D005404 ORTHO05D006623 1.1e-13 79.7 75 69.3
Gohir.A10G038300 Gossypium hirsutum HOM05D005404 ORTHO05D006623 1.1e-13 79.7 75 70.7
MBI07_g07833_MAGBIO Magnolia biondii HOM05D005404 ORTHO05D006623 1.1e-13 79.7 75 68.0
MD16G1202800 Malus domestica HOM05D005404 ORTHO05D006623 1.1e-13 79.7 75 69.3
PSO017G4964 Papaver somniferum HOM05D005404 ORTHO05D006623 1.1e-13 79.7 73 69.9
RcHm_v2.0_Chr5g0013081 Rosa chinensis HOM05D005404 ORTHO05D006623 1.1e-13 79.7 75 69.3
TWI09G1218 Tripterygium wilfordii HOM05D005404 ORTHO05D006623 1.1e-13 79.7 79 67.1
arahy.Tifrunner.gnm1.ann1.HITJ74 Arachis hypogaea HOM05D005404 ORTHO05D006623 1.5e-13 79.3 75 69.3
Ca_18287_v3 Cicer arietinum L. HOM05D005404 ORTHO05D006623 1.5e-13 79.3 75 66.7
Duzib160G0646 Durio zibethinus HOM05D005404 ORTHO05D006623 1.5e-13 79.3 75 69.3
Lj2A310T44 Lonicera japonica HOM05D005404 ORTHO05D006623 1.5e-13 79.3 75 69.3
Manes.15G118100 Manihot esculenta HOM05D005404 ORTHO05D006623 1.5e-13 79.3 75 69.3
Aqoxy4G00127 Aquilegia oxysepala HOM05D005404 ORTHO05D006623 1.9e-13 79.0 75 68.0
Cpa.g.sc17.100 Carica papaya HOM05D005404 ORTHO05D006623 1.9e-13 79.0 72 72.2
Phvul.002G197500 Phaseolus vulgaris HOM05D005404 ORTHO05D006623 1.9e-13 79.0 75 66.7
EL10Ac8g19776 Beta vulgaris HOM05D005404 ORTHO05D006623 2.5e-13 78.6 75 68.0
CiPaw.09G128300 Carya illinoinensis HOM05D005404 ORTHO05D006623 2.5e-13 78.6 75 66.7
AUR62035781 Chenopodium quinoa HOM05D005404 ORTHO05D006623 2.5e-13 78.6 75 65.3
MD05G1290500 Malus domestica HOM05D005404 ORTHO05D006623 2.5e-13 78.6 75 65.3
Psat7g091480 Pisum sativum HOM05D005404 ORTHO05D006623 2.5e-13 78.6 75 65.3
Potri.001G352600 Populus trichocarpa HOM05D005404 ORTHO05D006623 2.5e-13 78.6 75 68.0
arahy.Tifrunner.gnm1.ann1.JSLQ1D Arachis hypogaea HOM05D005404 ORTHO05D006623 3.2e-13 78.2 74 68.9
AUR62027578 Chenopodium quinoa HOM05D005404 ORTHO05D006623 3.2e-13 78.2 75 65.3
MELO3C007159.2 Cucumis melo HOM05D005404 ORTHO05D006623 3.2e-13 78.2 80 65.0
CsaV3_6G051470 Cucumis sativus L. HOM05D005404 ORTHO05D006623 3.2e-13 78.2 80 65.0
Glyma.05G127400 Glycine max HOM05D005404 ORTHO05D006623 3.2e-13 78.2 75 69.3
Glyma.08G082100 Glycine max HOM05D005404 ORTHO05D006623 3.2e-13 78.2 75 69.3
Lj4g0012372 Lotus japonicus HOM05D005404 ORTHO05D006623 3.2e-13 78.2 75 65.3
Nitab4.5_0000206g0130 Nicotiana tabacum HOM05D005404 ORTHO05D006623 3.2e-13 78.2 75 68.0
Prupe.4G075200 Prunus persica HOM05D005404 ORTHO05D006623 3.2e-13 78.2 75 68.0
QL05p060078 Quercus lobata HOM05D005404 ORTHO05D006623 3.2e-13 78.2 74 70.3
Sabra16G0231900 Salix brachista HOM05D005404 ORTHO05D006623 3.2e-13 78.2 74 67.6
TAR626G1892 Trochodendron aralioides HOM05D005404 ORTHO05D006623 3.2e-13 78.2 75 68.0
PGR042G3093 Punica granatum HOM05D005404 ORTHO05D006623 4.2e-13 77.8 75 68.0
Sed0003587 Sechium edule HOM05D005404 ORTHO05D006623 4.2e-13 77.8 80 65.0
Nn4g26481 Nelumbo nucifera HOM05D005404 ORTHO05D006623 7.2e-13 77.0 74 68.9
Sc05g0006520 Simmondsia chinensis HOM05D005404 ORTHO05D006623 7.2e-13 77.0 75 66.7
Manes.17G066000 Manihot esculenta HOM05D005404 ORTHO05D006623 9.4e-13 76.6 75 68.0
Hma1.2p1_0015F.1_g010240 Hydrangea macrophylla HOM05D005404 ORTHO05D006623 1.2e-12 76.3 74 64.9
Medtr4g094580 Medicago truncatula HOM05D005404 ORTHO05D006623 1.2e-12 76.3 75 64.0
SalBow7G3345 Salvia bowleyana HOM05D005404 ORTHO05D006623 1.6e-12 75.9 73 64.4
MD09G1183100 Malus domestica HOM05D005404 ORTHO05D006623 2.7e-12 75.1 75 64.0
SGA_v2.0_scaffold333G49013 Striga asiatica HOM05D005404 ORTHO05D006623 2.7e-12 75.1 73 64.4
AagrBONN_evm.TU.Sc2ySwM_362.2923 Anthoceros agrestis HOM05D005404 ORTHO05D006623 3.6e-12 74.7 73 64.4
Migut.H01386 Erythranthe guttata HOM05D005404 ORTHO05D006623 4.7e-12 74.3 73 63.0
Oeu046548.1 Olea europaea HOM05D005404 ORTHO05D006623 6.1e-12 73.9 73 61.6
Os05g0546500 Oryza sativa ssp. japonica HOM05D005404 ORTHO05D006623 8.0e-12 73.6 78 61.5
Os05g0547850 Oryza sativa ssp. japonica HOM05D005404 ORTHO05D006623 1.0e-11 73.2 75 62.7
unitig_26.g10094 Utricularia gibba HOM05D005404 ORTHO05D006623 1.0e-11 73.2 73 61.6
CAN.G257.34 Capsicum annuum HOM05D005404 ORTHO05D006623 1.4e-11 72.8 75 62.7
Mapoly0080s0013 Marchantia polymorpha HOM05D005404 ORTHO05D006623 1.4e-11 72.8 75 60.0
Oeu012458.1 Olea europaea HOM05D005404 ORTHO05D006623 1.4e-11 72.8 73 61.6
Peaxi162Scf00482g00049 Petunia axillaris HOM05D005404 ORTHO05D006623 1.4e-11 72.8 75 62.7
Solyc02g071150.3 Solanum lycopersicum HOM05D005404 ORTHO05D006623 1.4e-11 72.8 75 62.7
Sopen02g020230 Solanum pennellii HOM05D005404 ORTHO05D006623 1.4e-11 72.8 75 62.7
PGSC0003DMG400003081 Solanum tuberosum HOM05D005404 ORTHO05D006623 1.4e-11 72.8 75 62.7
Oeu052389.2 Olea europaea HOM05D005404 ORTHO05D006623 1.8e-11 72.4 72 62.5
Zm00001eb342640 Zea mays HOM05D005404 ORTHO05D006623 1.8e-11 72.4 75 61.3
SEGI_04398 Sequoiadendron giganteum HOM05D005404 ORTHO05D006623 4.0e-11 71.2 74 63.5
TAR627G1065 Trochodendron aralioides HOM05D005404 ORTHO05D006623 4.0e-11 71.2 72 58.3
Zm00001eb294640 Zea mays HOM05D005404 ORTHO05D006623 6.7e-11 70.5 75 60.0
MSTRG.16208 Avicennia marina HOM05D005404 ORTHO05D006623 8.8e-11 70.1 73 61.6
BcaB07g32570 Brassica carinata HOM05D005404 ORTHO05D006623 1.1e-10 69.7 72 59.7
A07p10200 Brassica napus HOM05D005404 ORTHO05D006623 1.1e-10 69.7 64 64.1
BcaC01g00143 Brassica carinata HOM05D005404 ORTHO05D006623 2.0e-10 68.9 75 64.0
A08p24810 Brassica napus HOM05D003390 ORTHO05D004189 2.0e-10 68.9 75 64.0
Thhalv10009098m.g Eutrema salsugineum HOM05D005404 ORTHO05D006623 2.0e-10 68.9 75 64.0
Sp1g25740 Schrenkiella parvula HOM05D005404 ORTHO05D006623 2.0e-10 68.9 75 64.0
AL1G43680 Arabidopsis lyrata HOM05D005404 ORTHO05D006623 2.6e-10 68.6 52 73.1
AT1G29850 Arabidopsis thaliana HOM05D005404 ORTHO05D006623 2.6e-10 68.6 52 73.1
MSTRG.14760 Avicennia marina HOM05D005404 ORTHO05D006623 2.6e-10 68.6 73 61.6
BcaB03g12183 Brassica carinata HOM05D005404 ORTHO05D006623 2.6e-10 68.6 75 64.0
BcaB03g13855 Brassica carinata HOM05D005404 ORTHO05D006623 2.6e-10 68.6 75 61.3
BcaC06g35468 Brassica carinata HOM05D005404 ORTHO05D006623 2.6e-10 68.6 75 61.3
BolC3t19881H Brassica oleracea HOM05D005404 ORTHO05D006623 2.6e-10 68.6 52 73.1
BolC7t42063H Brassica oleracea HOM05D005404 ORTHO05D006623 2.6e-10 68.6 52 73.1
BraA07t28813Z Brassica rapa HOM05D005404 ORTHO05D006623 2.6e-10 68.6 52 73.1
BraA08t34436Z Brassica rapa HOM05D003390 ORTHO05D004189 2.6e-10 68.6 52 73.1
Carub.0001s2809 Capsella rubella HOM05D005404 ORTHO05D006623 2.6e-10 68.6 52 73.1
CARHR029600 Cardamine hirsuta HOM05D005404 ORTHO05D006623 2.6e-10 68.6 52 73.1
THA.LOC104812663 Tarenaya hassleriana HOM05D005404 ORTHO05D006623 2.6e-10 68.6 75 65.3
C05p28570 Brassica napus HOM05D005404 ORTHO05D006623 5.7e-10 67.4 72 58.3
BolC5t31581H Brassica oleracea HOM05D005404 ORTHO05D006623 5.7e-10 67.4 72 58.3
THA.LOC104814282 Tarenaya hassleriana HOM05D005404 ORTHO05D006623 7.5e-10 67.0 75 64.0
ATR0681G149 Amborella trichopoda HOM05D005404 ORTHO05D006623 9.7e-10 66.6 52 73.1
Nitab4.5_0003527g0030 Nicotiana tabacum HOM05D005404 ORTHO05D006623 9.7e-10 66.6 70 60.0
SMO358G0232 Selaginella moellendorffii HOM05D005404 ORTHO05D006623 9.7e-10 66.6 73 57.5
BcaC05g26997 Brassica carinata HOM05D005404 ORTHO05D006623 1.3e-09 66.2 52 71.2
AUR62023445 Chenopodium quinoa HOM05D005404 ORTHO05D006623 2.2e-09 65.5 73 56.2
Pp3c14_19320 Physcomitrium patens HOM05D005404 ORTHO05D006623 2.8e-09 65.1 75 54.7
Peaxi162Scf00121g02445 Petunia axillaris HOM05D005404 ORTHO05D006623 3.1e-08 61.6 75 53.3
TAR636G3446 Trochodendron aralioides HOM05D005404 ORTHO05D006623 7.0e-08 60.5 48 72.9
Nitab4.5_0010964g0060 Nicotiana tabacum HOM05D000728 ORTHO05D001474 1.7e-06 55.8 76 53.9
Nitab4.5_0008782g0030 Nicotiana tabacum HOM05D005404 ORTHO05D006623 3.8e-06 54.7 75 53.3

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (6 genes)
Brassica napus (3 genes)
Brassica oleracea (3 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (0 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (1 genes)
Durio zibethinus (4 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (3 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (4 genes)
Olea europaea (3 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings