Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047507 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 3.3e-212 741.5 393 100.0
CSS0031566 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 9.9e-156 553.9 446 68.2
Rhsim06G0223700 Rhododendron simsii HOM05D005375 ORTHO05D006598 1.9e-151 539.7 406 73.4
CSS0021148 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 7.3e-151 537.7 410 72.2
Dinv22229 Davidia involucrata HOM05D005375 ORTHO05D006598 1.5e-148 530.0 405 74.8
Nitab4.5_0004445g0070 Nicotiana tabacum HOM05D005375 ORTHO05D006598 4.2e-146 521.9 413 69.0
Manes.03G136300 Manihot esculenta HOM05D005375 ORTHO05D006598 5.4e-146 521.5 425 66.8
Thecc.07G027900 Theobroma cacao HOM05D005375 ORTHO05D006598 7.1e-146 521.2 424 70.3
Nitab4.5_0005078g0020 Nicotiana tabacum HOM05D005375 ORTHO05D006598 2.8e-142 509.2 413 69.5
PGSC0003DMG400022298 Solanum tuberosum HOM05D005375 ORTHO05D006598 3.1e-141 505.8 424 66.7
vmacro22307 Vaccinium macrocarpon HOM05D005375 ORTHO05D006598 4.0e-141 505.4 458 64.6
Nitab4.5_0001160g0010 Nicotiana tabacum HOM05D005375 ORTHO05D006598 1.5e-140 503.4 438 62.8
Dinv40796 Davidia involucrata HOM05D005375 ORTHO05D006598 3.4e-140 502.3 439 68.1
MSTRG.6961 Avicennia marina HOM05D005375 ORTHO05D006598 5.8e-140 501.5 418 68.7
Nitab4.5_0007749g0010 Nicotiana tabacum HOM05D005375 ORTHO05D006598 2.4e-138 496.1 439 63.1
Duzib170G0122 Durio zibethinus HOM05D005375 ORTHO05D006598 1.0e-136 490.7 421 67.9
Cfa020276 Carpinus fangiana HOM05D005375 ORTHO05D006598 3.9e-136 488.8 452 61.7
TWI38G0072 Tripterygium wilfordii HOM05D005375 ORTHO05D006598 1.1e-135 487.3 434 63.6
Ciclev10008309m.g Citrus clementina HOM05D005375 ORTHO05D006598 2.5e-135 486.1 447 63.5
CAN.G337.55 Capsicum annuum HOM05D005375 ORTHO05D006598 3.6e-134 482.3 450 60.2
SGA_v2.0_scaffold8G04388 Striga asiatica HOM05D005375 ORTHO05D006598 1.1e-133 480.7 425 63.1
TAR627G0180 Trochodendron aralioides HOM05D005375 ORTHO05D006598 6.9e-133 478.0 441 63.0
Cc05_g14340 Coffea canephora HOM05D005375 ORTHO05D006598 2.0e-132 476.5 448 63.4
Migut.M01705 Erythranthe guttata HOM05D005375 ORTHO05D006598 2.6e-132 476.1 417 66.4
ECA240G0086 Erigeron canadensis HOM05D005375 ORTHO05D006598 1.7e-131 473.4 438 63.5
TAR629G0374 Trochodendron aralioides HOM05D005375 ORTHO05D006598 2.2e-131 473.0 394 68.8
MD03G1294800 Malus domestica HOM05D005375 ORTHO05D006598 3.8e-131 472.2 446 61.9
Aqoxy1G04123 Aquilegia oxysepala HOM05D005375 ORTHO05D006598 1.6e-129 466.8 441 61.2
QL08p007584 Quercus lobata HOM05D005375 ORTHO05D006598 6.0e-129 464.9 443 60.9
Glyma.14G018200 Glycine max HOM05D005375 ORTHO05D006598 1.0e-128 464.2 497 56.1
MD00G1179000 Malus domestica HOM05D005375 ORTHO05D006598 3.9e-128 462.2 446 60.8
MSTRG.12999 Avicennia marina HOM05D005375 ORTHO05D006598 1.5e-127 460.3 420 63.8
ClCG10G005050 Citrullus lanatus HOM05D005375 ORTHO05D006598 7.4e-127 458.0 456 58.3
Potri.011G082000 Populus trichocarpa HOM05D005375 ORTHO05D006598 1.3e-126 457.2 437 61.6
Sopen07g033190 Solanum pennellii HOM05D005375 ORTHO05D006598 2.8e-126 456.1 427 61.8
Phvul.008G272700 Phaseolus vulgaris HOM05D005375 ORTHO05D006598 6.2e-126 454.9 489 56.6
Prupe.8G266900 Prunus persica HOM05D005375 ORTHO05D006598 6.2e-126 454.9 441 63.0
AUR62015884 Chenopodium quinoa HOM05D005375 ORTHO05D006598 1.1e-125 454.1 443 58.7
CsaV3_3G004730 Cucumis sativus L. HOM05D005375 ORTHO05D006598 2.4e-125 453.0 423 61.5
Solyc07g064980.3 Solanum lycopersicum HOM05D005375 ORTHO05D006598 2.4e-125 453.0 430 60.7
Gorai.009G443800 Gossypium raimondii HOM05D005375 ORTHO05D006598 4.0e-125 452.2 435 62.1
Sabra11G0065600 Salix brachista HOM05D005375 ORTHO05D006598 9.0e-125 451.1 465 59.8
Gohir.A04G011700 Gossypium hirsutum HOM05D005375 ORTHO05D006598 2.6e-124 449.5 433 61.4
AUR62020339 Chenopodium quinoa HOM05D005375 ORTHO05D006598 3.4e-124 449.1 435 58.6
Glyma.02G295200 Glycine max HOM05D005375 ORTHO05D006598 3.4e-124 449.1 474 58.0
Duzib268G0742 Durio zibethinus HOM05D005375 ORTHO05D006598 4.5e-124 448.7 421 64.1
Gohir.D05G374900 Gossypium hirsutum HOM05D005375 ORTHO05D006598 4.5e-124 448.7 433 61.7
CSS0025851 Camellia sinensis var. sinensis HOM05D005375 ORTHO05D006598 7.6e-124 448.0 361 69.5
Peaxi162Scf00235g00721 Petunia axillaris HOM05D005375 ORTHO05D006598 7.6e-124 448.0 445 59.1
HanXRQChr13g0408271 Helianthus annuus HOM05D005375 ORTHO05D006598 3.2e-122 442.6 449 59.2
Ca_06349_v3 Cicer arietinum L. HOM05D005375 ORTHO05D006598 1.6e-121 440.3 394 62.9
RcHm_v2.0_Chr7g0241441 Rosa chinensis HOM05D005375 ORTHO05D006598 7.9e-121 438.0 477 57.0
FAN18G4382 Fragaria x ananassa HOM05D005375 ORTHO05D006598 3.0e-120 436.0 478 56.3
FAN13G1970 Fragaria x ananassa HOM05D005375 ORTHO05D006598 5.1e-120 435.3 477 55.8
FvH4_5g39180 Fragaria vesca HOM05D005375 ORTHO05D006598 1.5e-119 433.7 478 56.1
HanXRQChr03g0076881 Helianthus annuus HOM05D005375 ORTHO05D006598 2.5e-119 433.0 431 59.9
CiPaw.11G194800 Carya illinoinensis HOM05D005375 ORTHO05D006598 2.8e-118 429.5 440 58.9
FAN04G2161 Fragaria x ananassa HOM05D005375 ORTHO05D006598 4.8e-118 428.7 477 54.1
Psat2g009920 Pisum sativum HOM05D005375 ORTHO05D006598 8.2e-118 427.9 509 51.9
EL10Ac4g07689 Beta vulgaris HOM05D005375 ORTHO05D006598 1.1e-117 427.6 458 55.7
Atru.chr2.3553 Acer truncatum HOM05D005375 ORTHO05D006598 1.4e-117 427.2 435 57.5
DCAR_022591 Daucus carota HOM05D005375 ORTHO05D006598 1.8e-117 426.8 434 58.1
LjContig00272g0009776 Lotus japonicus HOM05D005375 ORTHO05D006598 2.4e-117 426.4 484 54.1
Atru.chr2.3534 Acer truncatum HOM05D005375 ORTHO05D006598 4.1e-117 425.6 444 56.8
Lj1C881T5 Lonicera japonica HOM05D005375 ORTHO05D006598 9.0e-117 424.5 394 63.7
FAN08G1518 Fragaria x ananassa HOM05D005375 ORTHO05D006598 3.4e-116 422.5 478 55.2
TPR.G35360 Trifolium pratense HOM05D005375 ORTHO05D006598 4.5e-116 422.2 511 51.1
Actinidia05060 Actinidia chinensis HOM05D005375 ORTHO05D006598 1.4e-114 417.2 400 64.2
Hma1.2p1_1332F.1_g276150 Hydrangea macrophylla HOM05D005375 ORTHO05D006598 1.4e-114 417.2 431 58.7
MELO3C014172.2 Cucumis melo HOM05D005375 ORTHO05D006598 4.2e-114 415.6 428 57.2
VMungo0647G1984 Vigna mungo HOM05D005375 ORTHO05D006598 5.5e-114 415.2 503 52.3
Gohir.A01G084800 Gossypium hirsutum HOM05D005375 ORTHO05D006598 2.1e-113 413.3 427 60.2
PSO210G0227 Papaver somniferum HOM05D005375 ORTHO05D006598 2.1e-113 413.3 456 53.5
PSO302G0025 Papaver somniferum HOM05D005375 ORTHO05D006598 6.1e-113 411.8 455 53.6
Eucgr.F03508 Eucalyptus grandis HOM05D005375 ORTHO05D006598 1.3e-112 410.6 488 53.1
Gorai.002G093900 Gossypium raimondii HOM05D005375 ORTHO05D006598 1.5e-111 407.1 422 59.5
unitig_747.g21591 Utricularia gibba HOM05D005375 ORTHO05D006598 2.5e-111 406.4 433 58.0
Sp7g24730 Schrenkiella parvula HOM05D005375 ORTHO05D006598 4.3e-111 405.6 421 58.2
Gohir.D01G071200 Gossypium hirsutum HOM05D005375 ORTHO05D006598 1.3e-110 404.1 422 59.5
Migut.H01791 Erythranthe guttata HOM05D005375 ORTHO05D006598 2.8e-110 402.9 416 57.7
AT4G26750 Arabidopsis thaliana HOM05D005375 ORTHO05D006598 6.3e-110 401.7 419 56.6
CARHR234370 Cardamine hirsuta HOM05D005375 ORTHO05D006598 6.3e-110 401.7 436 56.7
BolC1t02212H Brassica oleracea HOM05D005375 ORTHO05D006598 2.4e-109 399.8 423 56.3
Carub.0007s1409 Capsella rubella HOM05D005375 ORTHO05D006598 1.5e-108 397.1 422 56.4
COL.COLO4_09738 Corchorus olitorius HOM05D005375 ORTHO05D006598 1.5e-108 397.1 406 58.9
AL7G26080 Arabidopsis lyrata HOM05D005375 ORTHO05D006598 4.5e-108 395.6 419 55.8
Lj6g0028194 Lotus japonicus HOM05D005375 ORTHO05D006598 3.2e-106 389.4 464 52.4
Oeu054311.1 Olea europaea HOM05D005375 ORTHO05D006598 4.6e-105 385.6 431 56.6
BraA01t01755Z Brassica rapa HOM05D000504 ORTHO05D000403 1.5e-103 380.6 422 55.9
THA.LOC104811633 Tarenaya hassleriana HOM05D005375 ORTHO05D006598 3.3e-103 379.4 409 56.7
Lsat_1_v5_gn_9_90720 Lactuca sativa HOM05D005375 ORTHO05D006598 4.4e-103 379.0 463 52.9
Medtr5g093880 Medicago truncatula HOM05D005375 ORTHO05D006598 2.4e-101 373.2 488 50.2
PGR031G3708 Punica granatum HOM05D005375 ORTHO05D006598 5.3e-101 372.1 438 53.9
Thhalv10025139m.g Eutrema salsugineum HOM05D005375 ORTHO05D006598 2.6e-100 369.8 428 54.4
CANSAT11G2127 Cannabis sativa HOM05D005375 ORTHO05D006598 4.5e-100 369.0 451 52.3
Aa31LG5G12180 Aethionema arabicum HOM05D005375 ORTHO05D006598 3.8e-99 365.9 447 51.5
A01p18000 Brassica napus HOM05D000504 ORTHO05D000403 5.0e-99 365.5 422 53.6
C01p22820 Brassica napus HOM05D000504 ORTHO05D006598 3.2e-98 362.8 422 53.1
Os06g0308800 Oryza sativa ssp. japonica HOM05D005375 ORTHO05D006598 4.2e-98 362.5 487 48.5
Nn1g07350 Nelumbo nucifera HOM05D005375 ORTHO05D006598 1.4e-96 357.5 461 50.8
Sed0014032 Sechium edule HOM05D005375 ORTHO05D006598 3.0e-96 356.3 390 56.2
Lalb_Chr04g0248131 Lupinus albus HOM05D005375 ORTHO05D006598 8.8e-96 354.8 506 48.0
ATR1101G026 Amborella trichopoda HOM05D005375 ORTHO05D006598 4.8e-94 349.0 418 52.4
CDE04G3304 Ceratophyllum demersum HOM05D005375 ORTHO05D006598 4.8e-94 349.0 401 53.6
CDE07G0643 Ceratophyllum demersum HOM05D005375 ORTHO05D006598 2.9e-91 339.7 427 49.6
SEGI_32868 Sequoiadendron giganteum HOM05D005375 ORTHO05D006598 1.2e-87 327.8 492 46.1
Lj8A173T72 Lonicera japonica HOM05D005375 ORTHO05D006598 2.0e-87 327.0 385 53.5
DCAR_016648 Daucus carota HOM05D005375 ORTHO05D006598 3.3e-87 326.2 372 54.8
GSVIVG01037729001 Vitis vinifera HOM05D005375 ORTHO05D006598 1.2e-84 317.8 196 81.6
Haze_09747 Corylus avellana HOM05D005375 ORTHO05D006598 4.0e-80 302.8 426 48.1
SMO271G0101 Selaginella moellendorffii HOM05D005375 ORTHO05D006598 6.3e-78 295.4 420 46.7
Zm00001eb281230 Zea mays HOM05D005375 ORTHO05D006598 8.3e-78 295.0 439 44.9
Cpa.g.sc284.2 Carica papaya HOM05D005375 ORTHO05D006598 3.1e-77 293.1 171 86.0
Lalb_Chr00c48g0412951 Lupinus albus HOM05D005375 ORTHO05D006598 2.9e-75 286.6 484 44.2
Mapoly0043s0080 Marchantia polymorpha HOM05D005375 ORTHO05D006598 5.0e-75 285.8 498 41.0
TAR624G1027 Trochodendron aralioides HOM05D005375 ORTHO05D006598 9.5e-74 281.6 191 75.9
BcaC09g52262 Brassica carinata HOM05D005375 ORTHO05D006598 2.1e-73 280.4 353 50.7
Pp3c12_1420 Physcomitrium patens HOM05D005375 ORTHO05D006598 9.8e-71 271.6 463 43.6
Sc16g0005720 Simmondsia chinensis HOM05D005375 ORTHO05D006598 1.3e-70 271.2 300 56.0
HPP92_015778 Vanilla planifolia HOM05D005375 ORTHO05D006598 2.4e-69 266.9 312 53.2
Actinidia32285 Actinidia chinensis HOM05D005375 ORTHO05D006598 3.6e-65 253.1 292 54.8
PGR031G2801 Punica granatum HOM05D005375 ORTHO05D006598 1.8e-64 250.8 336 51.5
SHI26566 Sapria himalayana HOM05D005375 ORTHO05D006598 1.5e-58 231.1 505 37.2
TWI39G0687 Tripterygium wilfordii HOM05D005375 ORTHO05D006598 3.4e-55 219.9 128 84.4
AagrBONN_evm.TU.Sc2ySwM_368.1760 Anthoceros agrestis HOM05D005375 ORTHO05D006598 2.7e-52 210.3 362 39.8
Lalb_Chr00c48g0413001 Lupinus albus HOM05D005375 ORTHO05D006598 7.5e-47 192.2 171 62.6
CBR_g50394 Chara braunii HOM05D005375 ORTHO05D006598 7.6e-39 165.6 406 35.7
Nn1g03334 Nelumbo nucifera HOM05D005375 ORTHO05D006598 1.3e-38 164.9 361 37.1
Cre03.g145227 Chlamydomonas reinhardtii HOM05D005375 ORTHO05D006598 2.1e-36 157.5 156 52.6
PRCOL_00004002 Prasinoderma coloniale HOM05D005375 ORTHO05D006598 5.6e-34 149.4 157 51.0
Actinidia37374 Actinidia chinensis HOM05D005375 ORTHO05D006598 2.1e-33 147.5 293 39.6
Actinidia20957 Actinidia chinensis HOM05D005375 ORTHO05D006598 9.3e-29 132.1 97 70.1
MCO03G124 Micromonas commoda HOM05D005375 ORTHO05D006598 3.9e-27 126.7 147 43.5
Zm00001eb381490 Zea mays HOM05D005375 ORTHO05D006598 1.4e-24 118.2 169 49.7
Ah.06g182230 Amaranthus hybridus HOM05D005375 ORTHO05D006598 2.9e-22 110.5 65 84.6
C08p09960 Brassica napus HOM05D000504 ORTHO05D000403 3.0e-19 100.5 363 29.5
BolC8t48673H Brassica oleracea HOM05D000504 ORTHO05D000403 3.0e-19 100.5 363 29.5
Hund23196 Selenicereus undatus HOM05D005375 ORTHO05D006598 3.0e-19 100.5 97 57.7
TAR624G1433 Trochodendron aralioides HOM05D005375 ORTHO05D006598 7.4e-18 95.9 116 51.7
CAN.G396.4 Capsicum annuum HOM05D005375 ORTHO05D006598 1.4e-16 91.7 128 46.1
CAN.G4023.1 Capsicum annuum HOM05D005375 ORTHO05D006598 6.9e-16 89.4 112 48.2
PGR044G1312 Punica granatum HOM05D003929 ORTHO05D004499 2.2e-14 84.3 49 79.6
CAN.G396.14 Capsicum annuum HOM05D005375 ORTHO05D006598 7.1e-13 79.3 76 57.9
MCO09G798 Micromonas commoda HOM05D005375 ORTHO05D006598 1.1e-10 72.0 233 31.3
BcaC07g38248 Brassica carinata HOM05D005375 ORTHO05D006598 4.3e-10 70.1 151 35.8
vmacro14248 Vaccinium macrocarpon HOM05D005375 ORTHO05D426817 1.0e-06 58.9 40 77.5

Acer truncatum (2 genes)
Actinidia chinensis (4 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (0 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (4 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (2 genes)
Lupinus albus (3 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (2 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (4 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (3 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (4 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings