Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047351 Camellia sinensis var. sinensis HOM05D005612 ORTHO05D007014 1.5e-225 785.8 390 100.0
Actinidia12252 Actinidia chinensis HOM05D005612 ORTHO05D007014 8.8e-197 690.3 387 87.9
vmacro13411 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 1.2e-193 679.9 390 86.9
Dinv43696 Davidia involucrata HOM05D005612 ORTHO05D007014 1.9e-191 672.5 390 85.9
Hma1.2p1_2025F.1_g311480 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 9.1e-186 653.7 390 82.8
Hma1.2p1_0511F.1_g169190 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 8.5e-184 647.1 390 82.1
GSVIVG01027677001 Vitis vinifera HOM05D005612 ORTHO05D007014 8.8e-181 637.1 390 80.3
TAR375G1134 Trochodendron aralioides HOM05D005612 ORTHO05D007014 7.2e-175 617.5 391 78.3
QL08p052678 Quercus lobata HOM05D005612 ORTHO05D007014 8.0e-174 614.0 391 78.5
DCAR_008555 Daucus carota HOM05D005612 ORTHO05D007014 9.7e-172 607.1 391 76.7
Nn4g26368 Nelumbo nucifera HOM05D005612 ORTHO05D007014 1.3e-171 606.7 391 75.2
Nitab4.5_0000264g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 1.9e-167 592.8 390 74.1
Cc02_g24020 Coffea canephora HOM05D005612 ORTHO05D007014 2.5e-167 592.4 390 74.4
Sopen08g002560 Solanum pennellii HOM05D005612 ORTHO05D007014 1.2e-166 590.1 390 75.1
Solyc08g006610.3 Solanum lycopersicum HOM05D005612 ORTHO05D007014 1.6e-166 589.7 390 74.9
Aqoxy1G04104 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 3.6e-166 588.6 391 73.4
Peaxi162Scf00045g01936 Petunia axillaris HOM05D005612 ORTHO05D007014 6.1e-166 587.8 387 74.9
Ciclev10010228m.g Citrus clementina HOM05D005612 ORTHO05D007014 8.0e-166 587.4 384 75.0
Atru.chr2.2479 Acer truncatum HOM05D005612 ORTHO05D007014 3.0e-165 585.5 390 73.6
Aqoxy3G02061 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 5.2e-165 584.7 391 72.9
Prupe.6G155400 Prunus persica HOM05D005612 ORTHO05D007014 1.2e-164 583.6 391 75.2
CAN.G530.1 Capsicum annuum HOM05D005612 ORTHO05D007014 2.6e-164 582.4 390 73.3
Eucgr.E01443 Eucalyptus grandis HOM05D005612 ORTHO05D007014 1.3e-163 580.1 390 74.6
Thecc.01G378200 Theobroma cacao HOM05D005612 ORTHO05D007014 6.3e-163 577.8 408 71.6
Duzib138G1608 Durio zibethinus HOM05D005612 ORTHO05D007014 1.4e-162 576.6 408 71.8
CANSAT01G1400 Cannabis sativa HOM05D005612 ORTHO05D007014 5.4e-162 574.7 390 72.8
Gorai.004G162600 Gossypium raimondii HOM05D005612 ORTHO05D007014 2.0e-161 572.8 408 70.3
Sed0014004 Sechium edule HOM05D005612 ORTHO05D007014 7.7e-161 570.9 390 72.3
TWI14G1300 Tripterygium wilfordii HOM05D005612 ORTHO05D007014 2.3e-160 569.3 390 71.8
MSTRG.17178 Avicennia marina HOM05D005612 ORTHO05D007014 8.6e-160 567.4 389 71.0
FAN28G0581 Fragaria x ananassa HOM05D005612 ORTHO05D007014 1.1e-159 567.0 392 73.5
Gohir.A08G135500 Gossypium hirsutum HOM05D005612 ORTHO05D007014 1.5e-159 566.6 408 70.1
CiPaw.01G263000 Carya illinoinensis HOM05D005612 ORTHO05D007014 1.9e-159 566.2 391 74.2
Haze_16797 Corylus avellana HOM05D005612 ORTHO05D007014 2.5e-159 565.8 364 79.7
Oeu055499.1 Olea europaea HOM05D005612 ORTHO05D007014 2.5e-159 565.8 372 73.9
vmacro21020 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 3.3e-159 565.5 396 73.7
RcHm_v2.0_Chr3g0497141 Rosa chinensis HOM05D005612 ORTHO05D007014 7.2e-159 564.3 392 74.0
PSO339G2081 Papaver somniferum HOM05D005612 ORTHO05D007014 9.5e-159 563.9 387 73.4
CsaV3_3G009760 Cucumis sativus L. HOM05D005612 ORTHO05D007014 1.6e-158 563.1 392 71.4
Migut.B01623 Erythranthe guttata HOM05D005612 ORTHO05D007014 3.6e-158 562.0 389 69.7
FAN28G2973 Fragaria x ananassa HOM05D005612 ORTHO05D007014 4.7e-158 561.6 392 73.0
Cfa015219 Carpinus fangiana HOM05D005612 ORTHO05D007014 8.0e-158 560.8 381 76.9
PSO384G4101 Papaver somniferum HOM05D005612 ORTHO05D007014 1.4e-157 560.1 386 72.5
FAN23G2738 Fragaria x ananassa HOM05D005612 ORTHO05D007014 6.8e-157 557.8 392 72.4
FvH4_1g28100 Fragaria vesca HOM05D005612 ORTHO05D007014 8.9e-157 557.4 392 72.2
ClCG05G002330 Citrullus lanatus HOM05D005612 ORTHO05D007014 1.5e-156 556.6 398 70.4
Lalb_Chr03g0039601 Lupinus albus HOM05D005612 ORTHO05D007014 9.8e-156 553.9 390 70.8
Manes.01G266600 Manihot esculenta HOM05D005612 ORTHO05D007014 1.7e-155 553.1 390 71.3
FAN26G0204 Fragaria x ananassa HOM05D005612 ORTHO05D007014 2.2e-155 552.7 414 68.8
Lj7C530T5 Lonicera japonica HOM05D005612 ORTHO05D007014 2.8e-155 552.4 424 68.2
Potri.014G068500 Populus trichocarpa HOM05D005612 ORTHO05D007014 6.3e-155 551.2 388 71.4
Hund07502 Selenicereus undatus HOM05D005612 ORTHO05D007014 1.1e-154 550.4 415 68.0
THA.LOC104827614 Tarenaya hassleriana HOM05D005612 ORTHO05D007014 4.1e-154 548.5 393 69.0
Lj3g0004128 Lotus japonicus HOM05D005612 ORTHO05D007014 5.4e-154 548.1 390 70.8
COL.COLO4_12531 Corchorus olitorius HOM05D005612 ORTHO05D007014 7.0e-154 547.7 374 72.7
Cpa.g.sc18.108 Carica papaya HOM05D005612 ORTHO05D007014 9.2e-154 547.4 381 72.2
Phvul.011G138100 Phaseolus vulgaris HOM05D005612 ORTHO05D007014 1.6e-153 546.6 390 70.5
EL10Ac4g10240 Beta vulgaris HOM05D005612 ORTHO05D007014 7.8e-153 544.3 391 69.8
TPR.G17234 Trifolium pratense HOM05D005612 ORTHO05D007014 1.7e-152 543.1 390 71.0
PGR042G0232 Punica granatum HOM05D005612 ORTHO05D007014 6.6e-152 541.2 388 70.4
ECA236G2759 Erigeron canadensis HOM05D005612 ORTHO05D007014 3.3e-151 538.9 393 69.2
Psat0s2995g0040 Pisum sativum HOM05D005612 ORTHO05D007014 7.3e-151 537.7 390 70.5
AUR62000130 Chenopodium quinoa HOM05D005612 ORTHO05D007014 1.6e-150 536.6 400 67.8
Gohir.D08G156300 Gossypium hirsutum HOM05D005612 ORTHO05D007014 1.6e-150 536.6 393 69.2
Manes.05G046700 Manihot esculenta HOM05D005612 ORTHO05D007014 6.1e-150 534.6 390 69.7
MD00G1094900 Malus domestica HOM05D005612 ORTHO05D007014 1.4e-149 533.5 401 70.1
Lsat_1_v5_gn_7_9741 Lactuca sativa HOM05D005612 ORTHO05D007014 4.0e-149 531.9 377 70.8
Glyma.12G134000 Glycine max HOM05D005612 ORTHO05D007014 1.5e-148 530.0 390 69.0
Lalb_Chr01g0021461 Lupinus albus HOM05D005612 ORTHO05D007014 2.6e-148 529.3 390 69.0
Carub.0004s2795 Capsella rubella HOM05D005612 ORTHO05D007014 9.8e-148 527.3 391 67.3
arahy.Tifrunner.gnm1.ann1.39QM8U Arachis hypogaea HOM05D005612 ORTHO05D007014 1.2e-145 520.4 390 69.0
Glyma.06G270700 Glycine max HOM05D005612 ORTHO05D007014 4.6e-145 518.5 392 68.6
arahy.Tifrunner.gnm1.ann1.Q1YE57 Arachis hypogaea HOM05D005612 ORTHO05D007014 6.0e-145 518.1 389 68.9
Nitab4.5_0005450g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 7.8e-145 517.7 390 67.2
Lsat_1_v5_gn_8_86120 Lactuca sativa HOM05D005612 ORTHO05D007014 3.0e-144 515.8 366 70.5
Medtr4g053430 Medicago truncatula HOM05D005612 ORTHO05D007014 5.0e-144 515.0 354 73.2
SalBow5G3218 Salvia bowleyana HOM05D005612 ORTHO05D007014 6.6e-144 514.6 368 68.8
AL4G44420 Arabidopsis lyrata HOM05D005612 ORTHO05D007014 3.3e-143 512.3 392 65.8
Thhalv10001485m.g Eutrema salsugineum HOM05D005612 ORTHO05D007014 9.5e-143 510.8 392 65.3
AT2G45320 Arabidopsis thaliana HOM05D005612 ORTHO05D007014 1.2e-142 510.4 392 66.6
HanXRQChr04g0122751 Helianthus annuus HOM05D005612 ORTHO05D007014 6.8e-141 504.6 392 66.6
Sp4g27340 Schrenkiella parvula HOM05D005612 ORTHO05D007014 5.8e-140 501.5 392 64.8
unitig_749.g14376 Utricularia gibba HOM05D005612 ORTHO05D007014 7.1e-138 494.6 386 65.5
BcaB01g03271 Brassica carinata HOM05D005612 ORTHO05D007014 7.8e-137 491.1 391 62.9
A03p25180 Brassica napus HOM05D005612 ORTHO05D007014 1.0e-136 490.7 391 63.2
Sabra14G0048200 Salix brachista HOM05D005612 ORTHO05D007014 3.9e-136 488.8 378 66.7
BraA03t11718Z Brassica rapa HOM05D005612 ORTHO05D007014 1.1e-135 487.3 391 62.4
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 1.5e-135 486.9 322 73.6
C03p30020 Brassica napus HOM05D005612 ORTHO05D007014 5.6e-135 485.0 392 62.2
Ca_19396_v3 Cicer arietinum L. HOM05D005612 ORTHO05D007014 1.6e-134 483.4 350 69.7
BcaC01g05140 Brassica carinata HOM05D005612 ORTHO05D007014 4.7e-134 481.9 391 62.7
BolC3t15349H Brassica oleracea HOM05D005612 ORTHO05D007014 4.7e-134 481.9 391 62.7
Ah.04g161950 Amaranthus hybridus HOM05D004275 ORTHO05D005720 2.0e-132 476.5 418 59.6
Sc16g0011470 Simmondsia chinensis HOM05D005612 ORTHO05D007014 3.7e-131 472.2 349 69.3
MELO3C006197.2 Cucumis melo HOM05D005612 ORTHO05D007014 7.8e-129 464.5 336 68.5
Zm00001eb195050 Zea mays HOM05D005612 ORTHO05D007014 9.6e-119 431.0 378 59.5
CDE07G1659 Ceratophyllum demersum HOM05D005612 ORTHO05D007014 4.0e-117 425.6 342 61.1
AUR62019310 Chenopodium quinoa HOM05D005612 ORTHO05D007014 7.1e-114 414.8 264 75.8
VMungo1127G0102 Vigna mungo HOM05D005612 ORTHO05D007014 4.6e-105 385.6 252 73.8
ATR1100G025 Amborella trichopoda HOM05D005612 ORTHO05D007014 2.1e-102 376.7 305 61.6
unitig_76.g29085 Utricularia gibba HOM05D005612 ORTHO05D007014 1.1e-98 364.4 385 52.5
MBI14_g08144_MAGBIO Magnolia biondii HOM05D005612 ORTHO05D007014 7.9e-97 358.2 264 68.9
CiPaw.09G176500 Carya illinoinensis HOM05D005612 ORTHO05D007014 3.2e-90 336.3 325 56.3
ATR0686G054 Amborella trichopoda HOM05D005612 ORTHO05D007014 3.9e-88 329.3 262 61.8
CARHR140520 Cardamine hirsuta HOM05D005612 ORTHO05D007014 5.1e-88 328.9 202 77.7
Dinv32369 Davidia involucrata HOM05D005612 ORTHO05D007014 6.3e-86 322.0 194 83.0
Aa31LG1G26830 Aethionema arabicum HOM05D005612 ORTHO05D007014 4.1e-85 319.3 190 78.4
SGA_v2.0_scaffold153G37000 Striga asiatica HOM05D005612 ORTHO05D007014 1.4e-80 304.3 226 67.7
Duzib138G0844 Durio zibethinus HOM05D005612 ORTHO05D007014 6.9e-77 292.0 164 84.8
SMO119G0175 Selaginella moellendorffii HOM05D005612 ORTHO05D007014 2.0e-71 273.9 279 47.3
Zm00001eb012290 Zea mays HOM05D005612 ORTHO05D007014 1.4e-64 251.1 187 63.6
Zm00001eb249030 Zea mays HOM05D005612 ORTHO05D007014 4.0e-64 249.6 178 67.4
FAN19G0199 Fragaria x ananassa HOM05D005612 ORTHO05D007014 1.6e-60 237.7 131 85.5
AagrBONN_evm.TU.Sc2ySwM_117.669 Anthoceros agrestis HOM05D005612 ORTHO05D007014 2.2e-54 217.2 235 46.8
Pp3c17_6010 Physcomitrium patens HOM05D005612 ORTHO05D007014 7.2e-50 202.2 212 48.1
MSTRG.28297 Avicennia marina HOM05D005612 ORTHO05D007014 6.8e-48 195.7 114 79.8
CARHR140530 Cardamine hirsuta HOM05D005612 ORTHO05D007014 2.0e-47 194.1 188 54.8
Medtr8g102045 Medicago truncatula HOM05D005612 ORTHO05D007014 1.6e-44 184.5 124 74.2
Gohir.A08G135200 Gossypium hirsutum HOM05D005612 ORTHO05D007014 6.1e-41 172.6 168 57.1
Zm00001eb385140 Zea mays HOM05D005612 ORTHO05D007014 4.0e-40 169.9 133 61.7
Zm00001eb084960 Zea mays HOM05D005612 ORTHO05D007014 4.4e-39 166.4 133 60.9
Medtr8g102040 Medicago truncatula HOM05D005612 ORTHO05D007014 5.7e-39 166.0 131 63.4
Oeu011925.1 Olea europaea HOM05D005612 ORTHO05D007014 5.4e-37 159.5 200 45.0
Rhsim01G0149000 Rhododendron simsii HOM05D005612 ORTHO05D007014 3.5e-36 156.8 243 40.3
SEGI_33395 Sequoiadendron giganteum HOM05D005612 ORTHO05D007014 2.0e-31 141.0 182 46.2
Gohir.A08G135550 Gossypium hirsutum HOM05D005612 ORTHO05D007014 1.7e-30 137.9 146 54.8
Zm00001eb270960 Zea mays HOM05D005612 ORTHO05D002685 3.2e-29 133.7 84 73.8
Haze_18350 Corylus avellana HOM05D005612 ORTHO05D007014 2.5e-26 124.0 72 84.7
MBI14_g08143_MAGBIO Magnolia biondii HOM05D005612 ORTHO05D007014 1.2e-25 121.7 113 53.1
TAR626G0370 Trochodendron aralioides HOM05D005612 ORTHO05D007014 3.6e-25 120.2 63 88.9
Glyma.20G076400 Glycine max HOM05D005612 ORTHO05D007014 4.4e-23 113.2 75 69.3
Zm00001eb321930 Zea mays HOM05D005612 ORTHO05D007014 1.7e-22 111.3 97 55.7
Os06g0571300 Oryza sativa ssp. japonica HOM05D005612 ORTHO05D007014 6.2e-17 92.8 93 59.1
Medtr8g102042 Medicago truncatula HOM05D005612 ORTHO05D007014 3.2e-13 80.5 67 58.2
MD15G1255900 Malus domestica HOM05D001392 ORTHO05D036605 1.7e-11 74.7 46 80.4
Lalb_Chr08g0243441 Lupinus albus HOM05D005612 ORTHO05D007014 4.3e-10 70.1 46 73.9
Dinv39084 Davidia involucrata HOM05D005612 ORTHO05D007014 2.8e-09 67.4 104 39.4

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (2 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (3 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (3 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (3 genes)
Magnolia biondii (2 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (7 genes)

Program Settings