Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047227 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 8.1e-57 223.4 104 100.0
CSS0046104 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 1.3e-54 216.1 104 95.2
CSS0021932 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 2.2e-54 215.3 104 95.2
CSS0002287 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 4.9e-54 214.2 104 94.2
CSS0044410 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 3.5e-52 208.0 104 92.3
Dinv44943 Davidia involucrata HOM05D003723 ORTHO05D004306 4.0e-48 194.5 104 84.6
Actinidia10210 Actinidia chinensis HOM05D003723 ORTHO05D004306 5.4e-45 184.1 104 79.8
Dinv39214 Davidia involucrata HOM05D003723 ORTHO05D004306 9.3e-45 183.3 104 80.8
Actinidia19302 Actinidia chinensis HOM05D003723 ORTHO05D004306 3.5e-44 181.4 104 78.8
Lj4A757T32 Lonicera japonica HOM05D003723 ORTHO05D004306 2.1e-41 172.2 106 75.5
CSS0041779 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 9.9e-39 163.3 104 76.0
Lj4C72T17 Lonicera japonica HOM05D003723 ORTHO05D004306 6.4e-38 160.6 99 72.7
Hma1.2p1_0210F.1_g089420 Hydrangea macrophylla HOM05D003723 ORTHO05D004306 4.2e-37 157.9 103 70.9
CSS0003704 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 9.3e-37 156.8 104 74.0
Nitab4.5_0009040g0020 Nicotiana tabacum HOM05D003723 ORTHO05D004306 2.1e-36 155.6 104 71.2
Solyc12g088290.2 Solanum lycopersicum HOM05D003723 ORTHO05D004306 4.6e-36 154.5 105 72.4
Cc10_g05060 Coffea canephora HOM05D003723 ORTHO05D004306 6.0e-36 154.1 104 70.2
Eucgr.F02239 Eucalyptus grandis HOM05D003723 ORTHO05D004306 7.9e-36 153.7 104 66.3
GSVIVG01009321001 Vitis vinifera HOM05D003723 ORTHO05D004306 1.0e-35 153.3 105 70.5
Nitab4.5_0002314g0030 Nicotiana tabacum HOM05D003723 ORTHO05D004306 3.0e-35 151.8 104 69.2
Sopen12g030290 Solanum pennellii HOM05D003723 ORTHO05D004306 3.0e-35 151.8 105 71.4
PGSC0003DMG400011543 Solanum tuberosum HOM05D003723 ORTHO05D004306 3.9e-35 151.4 106 71.7
PGSC0003DMG401010623 Solanum tuberosum HOM05D003723 ORTHO05D004306 3.9e-35 151.4 104 69.2
TAR628G0363 Trochodendron aralioides HOM05D003723 ORTHO05D004306 5.1e-35 151.0 104 67.3
Solyc04g077680.3 Solanum lycopersicum HOM05D003723 ORTHO05D004306 8.7e-35 150.2 104 69.2
HanXRQChr10g0292161 Helianthus annuus HOM05D003723 ORTHO05D004306 2.5e-34 148.7 104 63.5
DCAR_009874 Daucus carota HOM05D003723 ORTHO05D004306 3.3e-34 148.3 104 65.4
Peaxi162Scf00160g00521 Petunia axillaris HOM05D003723 ORTHO05D004306 7.4e-34 147.1 104 68.3
Sopen04g031320 Solanum pennellii HOM05D003723 ORTHO05D004306 9.6e-34 146.7 104 68.3
Nitab4.5_0003725g0010 Nicotiana tabacum HOM05D003723 ORTHO05D004306 1.6e-33 146.0 104 68.3
QL12p038269 Quercus lobata HOM05D003723 ORTHO05D004306 3.7e-33 144.8 103 62.1
QL93p0154_0009 Quercus lobata HOM05D003723 ORTHO05D004306 3.7e-33 144.8 103 62.1
Cfa013762 Carpinus fangiana HOM05D003723 ORTHO05D004306 1.8e-32 142.5 104 62.5
Potri.014G014900 Populus trichocarpa HOM05D003723 ORTHO05D004306 4.0e-32 141.4 104 64.4
Haze_22418 Corylus avellana HOM05D003723 ORTHO05D004306 5.3e-32 141.0 104 61.5
Nitab4.5_0000497g0070 Nicotiana tabacum HOM05D003723 ORTHO05D004306 6.9e-32 140.6 104 67.3
Ciclev10000301m.g Citrus clementina HOM05D003723 ORTHO05D004306 2.6e-31 138.7 105 61.9
Sabra14G0008900 Salix brachista HOM05D003723 ORTHO05D004306 3.4e-31 138.3 104 63.5
Potri.002G117500 Populus trichocarpa HOM05D003723 ORTHO05D004306 5.8e-31 137.5 104 63.5
Sabra02G0092000 Salix brachista HOM05D003723 ORTHO05D004306 5.8e-31 137.5 104 64.4
Atru.chr13.849 Acer truncatum HOM05D003723 ORTHO05D004306 1.3e-30 136.3 105 64.8
Peaxi162Scf00081g02729 Petunia axillaris HOM05D003723 ORTHO05D004306 1.3e-30 136.3 104 63.5
Manes.02G183600 Manihot esculenta HOM05D003723 ORTHO05D004306 1.7e-30 136.0 104 60.6
TWI56G1015 Tripterygium wilfordii HOM05D003723 ORTHO05D004306 6.5e-30 134.0 104 62.5
CiPaw.08G050900 Carya illinoinensis HOM05D003723 ORTHO05D004306 8.4e-30 133.7 104 59.6
ClCG05G020690 Citrullus lanatus HOM05D003723 ORTHO05D004306 8.4e-30 133.7 104 56.7
MSTRG.24381 Avicennia marina HOM05D003723 ORTHO05D004306 2.5e-29 132.1 104 65.4
CiPaw.07G173600 Carya illinoinensis HOM05D003723 ORTHO05D004306 4.2e-29 131.3 105 60.0
CsaV3_4G035140 Cucumis sativus L. HOM05D003723 ORTHO05D004306 9.3e-29 130.2 104 54.8
MELO3C016827.2 Cucumis melo HOM05D003723 ORTHO05D004306 3.5e-28 128.3 104 54.8
TWI12G0955 Tripterygium wilfordii HOM05D003723 ORTHO05D004306 4.6e-28 127.9 104 59.6
ECA247G0551 Erigeron canadensis HOM05D003723 ORTHO05D004306 1.0e-27 126.7 104 57.7
RcHm_v2.0_Chr6g0309831 Rosa chinensis HOM05D003723 ORTHO05D004306 1.0e-27 126.7 104 56.7
SGA_v2.0_scaffold152G36813 Striga asiatica HOM05D003723 ORTHO05D004306 1.3e-27 126.3 104 61.5
AUR62022465 Chenopodium quinoa HOM05D003723 ORTHO05D004306 2.3e-27 125.6 109 56.9
Sed0011873 Sechium edule HOM05D003723 ORTHO05D004306 3.0e-27 125.2 105 55.2
Sc02g0007980 Simmondsia chinensis HOM05D003723 ORTHO05D004306 3.0e-27 125.2 104 59.6
PGR031G2627 Punica granatum HOM05D003723 ORTHO05D004306 8.7e-27 123.6 106 59.4
Thecc.04G063000 Theobroma cacao HOM05D003723 ORTHO05D004306 1.9e-26 122.5 105 58.1
FvH4_2g32880 Fragaria vesca HOM05D003723 ORTHO05D004306 2.5e-26 122.1 104 57.7
FAN20G3047 Fragaria x ananassa HOM05D003723 ORTHO05D004306 2.5e-26 122.1 104 57.7
FAN24G1723 Fragaria x ananassa HOM05D003723 ORTHO05D004306 2.5e-26 122.1 104 57.7
HanXRQChr10g0292141 Helianthus annuus HOM05D003723 ORTHO05D004306 2.5e-26 122.1 104 58.7
EL10Ac1g02364 Beta vulgaris HOM05D003723 ORTHO05D004306 4.3e-26 121.3 109 55.0
FAN27G2988 Fragaria x ananassa HOM05D003723 ORTHO05D004306 4.3e-26 121.3 104 57.7
Sed0028163 Sechium edule HOM05D003723 ORTHO05D004306 4.3e-26 121.3 105 51.4
CANSAT25G0987 Cannabis sativa HOM05D003723 ORTHO05D004306 5.7e-26 120.9 104 52.9
AUR62043254 Chenopodium quinoa HOM05D003723 ORTHO05D004306 5.7e-26 120.9 107 55.1
FAN15G1506 Fragaria x ananassa HOM05D003723 ORTHO05D004306 5.7e-26 120.9 104 56.7
Prupe.1G421300 Prunus persica HOM05D003723 ORTHO05D004306 7.4e-26 120.6 105 56.2
Aqoxy3G00456 Aquilegia oxysepala HOM05D003723 ORTHO05D004306 9.6e-26 120.2 104 55.8
Lsat_1_v5_gn_0_45940 Lactuca sativa HOM05D003723 ORTHO05D004306 4.8e-25 117.9 104 60.6
Duzib151G0173 Durio zibethinus HOM05D003723 ORTHO05D004306 8.2e-25 117.1 105 56.2
Gohir.A10G151900 Gossypium hirsutum HOM05D003723 ORTHO05D004306 1.4e-24 116.3 106 57.5
Gohir.D10G114400 Gossypium hirsutum HOM05D003723 ORTHO05D004306 1.4e-24 116.3 106 57.5
Gorai.011G126100 Gossypium raimondii HOM05D003723 ORTHO05D004306 1.4e-24 116.3 106 57.5
Cpa.g.sc142.42 Carica papaya HOM05D003723 ORTHO05D004306 4.1e-24 114.8 110 52.7
unitig_0.g1045 Utricularia gibba HOM05D003723 ORTHO05D004306 2.6e-23 112.1 104 52.9
vmacro16900 Vaccinium macrocarpon HOM05D003723 ORTHO05D004306 2.6e-23 112.1 75 72.0
DCAR_012822 Daucus carota HOM05D003723 ORTHO05D004306 5.8e-23 110.9 105 53.3
SGA_v2.0_scaffold28G11839 Striga asiatica HOM05D003723 ORTHO05D004306 5.8e-23 110.9 104 54.8
Gohir.A02G089200 Gossypium hirsutum HOM05D003723 ORTHO05D004306 2.2e-22 109.0 104 51.9
Gorai.005G127000 Gossypium raimondii HOM05D003723 ORTHO05D004306 2.2e-22 109.0 104 51.9
COL.COLO4_29256 Corchorus olitorius HOM05D003723 ORTHO05D004306 6.5e-22 107.5 104 54.8
MD15G1067400 Malus domestica HOM05D003723 ORTHO05D004306 6.5e-22 107.5 105 47.6
CARHR287080 Cardamine hirsuta HOM05D003723 ORTHO05D004306 1.9e-21 105.9 103 50.5
AL6G41310 Arabidopsis lyrata HOM05D003723 ORTHO05D004306 4.2e-21 104.8 112 50.9
BraA03t12004Z Brassica rapa HOM05D003723 ORTHO05D004306 9.3e-21 103.6 111 46.8
MD08G1080300 Malus domestica HOM05D003723 ORTHO05D004306 1.6e-20 102.8 106 47.2
C03p33700 Brassica napus HOM05D003723 ORTHO05D004306 2.1e-20 102.4 111 46.8
BolC3t15689H Brassica oleracea HOM05D003723 ORTHO05D004306 2.1e-20 102.4 111 46.8
Gohir.D02G112100 Gossypium hirsutum HOM05D003723 ORTHO05D004306 2.1e-20 102.4 104 50.0
BcaB01g02881 Brassica carinata HOM05D003723 ORTHO05D004306 2.7e-20 102.1 111 46.8
Sp6g10450 Schrenkiella parvula HOM05D003723 ORTHO05D004306 3.5e-20 101.7 111 45.9
Carub.0006s2652 Capsella rubella HOM05D003723 ORTHO05D004306 4.6e-20 101.3 111 46.8
A03p27910 Brassica napus HOM05D003723 ORTHO05D004306 7.9e-20 100.5 111 45.9
AT4G07410 Arabidopsis thaliana HOM05D003723 ORTHO05D004306 1.0e-19 100.1 112 50.0
BcaC01g04785 Brassica carinata HOM05D003723 ORTHO05D004306 1.0e-19 100.1 109 45.9
Thhalv10028433m.g Eutrema salsugineum HOM05D003723 ORTHO05D004306 1.3e-19 99.8 111 45.9
Glyma.14G089042 Glycine max HOM05D003723 ORTHO05D004306 1.3e-19 99.8 104 48.1
PSO017G5808 Papaver somniferum HOM05D003723 ORTHO05D004306 2.3e-19 99.0 106 50.0
Lalb_Chr14g0368121 Lupinus albus HOM05D003723 ORTHO05D004306 3.0e-19 98.6 104 46.2
Aa31sc622G20 Aethionema arabicum HOM05D003723 ORTHO05D004306 3.9e-19 98.2 111 45.0
Zm00001eb056350 Zea mays HOM05D003723 ORTHO05D004306 5.7e-18 94.4 104 49.0
arahy.Tifrunner.gnm1.ann1.YU9IEB Arachis hypogaea HOM05D003723 ORTHO05D004306 1.3e-17 93.2 104 43.3
Glyma.17G233900 Glycine max HOM05D003723 ORTHO05D004306 1.3e-17 93.2 104 45.2
AT1G27470 Arabidopsis thaliana HOM05D003723 ORTHO05D004306 1.6e-17 92.8 107 41.1
DCAR_032226 Daucus carota HOM05D003723 ORTHO05D004306 1.6e-17 92.8 88 50.0
Lalb_Chr22g0355711 Lupinus albus HOM05D003723 ORTHO05D004306 1.6e-17 92.8 104 46.2
Os03g0735100 Oryza sativa ssp. japonica HOM05D003723 ORTHO05D004306 2.2e-17 92.4 104 51.0
THA.LOC104824968 Tarenaya hassleriana HOM05D003723 ORTHO05D004306 3.7e-17 91.7 111 44.1
DCAR_004814 Daucus carota HOM05D003723 ORTHO05D004306 8.2e-17 90.5 88 48.9
PSO541G5768 Papaver somniferum HOM05D003723 ORTHO05D004306 1.1e-16 90.1 105 43.8
AL1G40900 Arabidopsis lyrata HOM05D003723 ORTHO05D004306 1.4e-16 89.7 107 41.1
Sp1g23720 Schrenkiella parvula HOM05D003723 ORTHO05D004306 1.4e-16 89.7 111 40.5
CARHR027080 Cardamine hirsuta HOM05D003723 ORTHO05D004306 2.4e-16 89.0 110 38.2
Carub.0001s2603 Capsella rubella HOM05D003723 ORTHO05D004306 4.1e-16 88.2 107 40.2
Thhalv10006817m.g Eutrema salsugineum HOM05D003723 ORTHO05D004306 5.3e-16 87.8 109 40.4
ATR0739G177 Amborella trichopoda HOM05D003723 ORTHO05D004306 6.9e-16 87.4 104 43.3
BcaC01g06947 Brassica carinata HOM05D003723 ORTHO05D004306 4.5e-15 84.7 104 38.5
Ca_13209_v3 Cicer arietinum L. HOM05D003723 ORTHO05D004306 5.9e-15 84.3 105 42.9
CDE04G2756 Ceratophyllum demersum HOM05D003723 ORTHO05D004306 1.0e-14 83.6 106 41.5
BraA08t34575Z Brassica rapa HOM05D003723 ORTHO05D004306 5.0e-14 81.3 104 37.5
Lj5g0007294 Lotus japonicus HOM05D003723 ORTHO05D004306 5.0e-14 81.3 104 42.3
VMungo0647G0070 Vigna mungo HOM05D003723 ORTHO05D004306 5.0e-14 81.3 104 43.3
BcaC01g01603 Brassica carinata HOM05D003723 ORTHO05D004306 6.5e-14 80.9 104 37.5
A08p26240 Brassica napus HOM05D003723 ORTHO05D004306 6.5e-14 80.9 104 37.5
C03p74200 Brassica napus HOM05D003723 ORTHO05D004306 6.5e-14 80.9 104 37.5
THA.LOC104825785 Tarenaya hassleriana HOM05D003723 ORTHO05D004306 1.1e-13 80.1 108 39.8
arahy.Tifrunner.gnm1.ann1.82WHW6 Arachis hypogaea HOM05D003723 ORTHO05D004306 1.4e-13 79.7 98 39.8
Medtr8g014080 Medicago truncatula HOM05D003723 ORTHO05D004306 1.4e-13 79.7 104 38.5
Phvul.001G028900 Phaseolus vulgaris HOM05D003723 ORTHO05D004306 9.4e-13 77.0 117 42.7
Aa31LG7G10210 Aethionema arabicum HOM05D003723 ORTHO05D004306 1.2e-12 76.6 110 37.3
BcaC05g26567 Brassica carinata HOM05D003723 ORTHO05D004306 2.1e-12 75.9 103 41.7
BcaC05g26751 Brassica carinata HOM05D003723 ORTHO05D004306 2.7e-12 75.5 114 39.5
SEGI_24646 Sequoiadendron giganteum HOM05D003723 ORTHO05D004306 2.7e-12 75.5 108 45.4
Zm00001eb215430 Zea mays HOM05D003723 ORTHO05D004306 2.7e-12 75.5 104 44.2
TPR.G12983 Trifolium pratense HOM05D003723 ORTHO05D004306 1.8e-11 72.8 105 34.3
Psat6g017680 Pisum sativum HOM05D003723 ORTHO05D004306 3.9e-11 71.6 106 39.6
TPR.G32238 Trifolium pratense HOM05D003723 ORTHO05D004306 3.9e-11 71.6 104 37.5
Mapoly0027s0127 Marchantia polymorpha HOM05D003723 ORTHO05D004306 2.5e-10 68.9 83 41.0
SMO367G0860 Selaginella moellendorffii HOM05D003723 ORTHO05D004306 4.8e-09 64.7 50 58.0
BraA09t39357Z Brassica rapa HOM05D003723 ORTHO05D004306 4.1e-08 61.6 94 37.2
Medtr1g017880 Medicago truncatula HOM05D003723 ORTHO05D004306 5.3e-08 61.2 113 32.7
Pp3c19_13580 Physcomitrium patens HOM05D003723 ORTHO05D004306 6.9e-08 60.8 87 39.1
C05p26190 Brassica napus HOM05D003723 ORTHO05D004306 1.5e-07 59.7 94 37.2
Pp3c22_14490 Physcomitrium patens HOM05D003723 ORTHO05D004306 2.6e-07 58.9 42 59.5
BolC3t19677H Brassica oleracea HOM05D003723 ORTHO05D004306 7.7e-07 57.4 107 32.7
A09p38510 Brassica napus HOM05D003723 ORTHO05D004306 1.0e-06 57.0 88 37.5
BolC5t31333H Brassica oleracea HOM05D003723 ORTHO05D004306 3.8e-06 55.1 88 37.5
CBR_g57871 Chara braunii HOM05D003723 ORTHO05D004306 3.8e-06 55.1 104 30.8

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (2 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (6 genes)
Brassica napus (6 genes)
Brassica oleracea (3 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (7 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (4 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (4 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (2 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings