Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
CSS0015475	Camellia sinensis var. sinensis	HOM05D003891	ORTHO05D004802	1.4e-46	189.1	86	100.0
CSS0046534	Camellia sinensis var. sinensis	HOM05D003891	ORTHO05D004802	1.4e-46	189.1	86	100.0
Lj5C171T9	Lonicera japonica	HOM05D003891	ORTHO05D004802	1.2e-16	89.7	43	90.7
Rhsim05G0044600	Rhododendron simsii	HOM05D003891	ORTHO05D004802	2.6e-16	88.6	45	86.7
CSS0031527	Camellia sinensis var. sinensis	HOM05D003891	ORTHO05D004802	4.4e-16	87.8	41	92.7
Dinv14180	Davidia involucrata	HOM05D003891	ORTHO05D004802	4.4e-16	87.8	42	90.5
Cc09_g10890	Coffea canephora	HOM05D003891	ORTHO05D004802	7.5e-16	87.0	42	88.1
Dinv41863	Davidia involucrata	HOM05D003891	ORTHO05D004802	9.8e-16	86.7	51	72.5
HanXRQChr16g0515191	Helianthus annuus	HOM05D003891	ORTHO05D004802	1.3e-15	86.3	42	85.7
Actinidia26326	Actinidia chinensis	HOM05D003891	ORTHO05D004802	2.2e-15	85.5	41	90.2
Atru.chr5.3571	Acer truncatum	HOM05D003891	ORTHO05D004802	6.3e-15	84.0	44	81.8
Phvul.004G127600	Phaseolus vulgaris	HOM05D003891	ORTHO05D004802	1.8e-14	82.4	41	82.9
Hund00096	Selenicereus undatus	HOM05D003891	ORTHO05D004802	1.8e-14	82.4	44	79.5
VMungo0464G1760	Vigna mungo	HOM05D003891	ORTHO05D004802	1.8e-14	82.4	41	82.9
Haze_01964	Corylus avellana	HOM05D003891	ORTHO05D004802	2.4e-14	82.0	51	70.6
FvH4_2g16941	Fragaria vesca	HOM05D003891	ORTHO05D004802	2.4e-14	82.0	42	83.3
Prupe.8G181200	Prunus persica	HOM05D003891	ORTHO05D004802	2.4e-14	82.0	42	83.3
ECA233G4850	Erigeron canadensis	HOM05D003891	ORTHO05D004802	3.1e-14	81.6	42	81.0
Hma1.2p1_0271F.1_g108710	Hydrangea macrophylla	HOM05D003891	ORTHO05D004802	3.1e-14	81.6	42	81.0
RcHm_v2.0_Chr6g0281141	Rosa chinensis	HOM05D003891	ORTHO05D004802	3.1e-14	81.6	42	81.0
Aqoxy6G01549	Aquilegia oxysepala	HOM05D003891	ORTHO05D004802	4.1e-14	81.3	42	81.0
MD05G1141200	Malus domestica	HOM05D003891	ORTHO05D004802	4.1e-14	81.3	42	83.3
MD10G1142600	Malus domestica	HOM05D003891	ORTHO05D004802	4.1e-14	81.3	42	83.3
arahy.Tifrunner.gnm1.ann1.BD83WD	Arachis hypogaea	HOM05D003891	ORTHO05D004802	5.4e-14	80.9	52	71.2
arahy.Tifrunner.gnm1.ann1.HVI0X6	Arachis hypogaea	HOM05D003891	ORTHO05D004802	5.4e-14	80.9	52	71.2
Nn6g31645	Nelumbo nucifera	HOM05D003891	ORTHO05D004802	5.4e-14	80.9	42	78.6
Nitab4.5_0005657g0030	Nicotiana tabacum	HOM05D003891	ORTHO05D004802	5.4e-14	80.9	42	81.0
QL11p056607	Quercus lobata	HOM05D003891	ORTHO05D004802	5.4e-14	80.9	42	81.0
CsaV3_7G002080	Cucumis sativus L.	HOM05D003891	ORTHO05D004802	7.0e-14	80.5	42	81.0
Migut.B00004	Erythranthe guttata	HOM05D003891	ORTHO05D004802	7.0e-14	80.5	42	81.0
Peaxi162Scf00374g00733	Petunia axillaris	HOM05D003891	ORTHO05D004802	7.0e-14	80.5	42	81.0
Sc08g0002090	Simmondsia chinensis	HOM05D003891	ORTHO05D004802	7.0e-14	80.5	43	79.1
PGSC0003DMG400016830	Solanum tuberosum	HOM05D003891	ORTHO05D004802	7.0e-14	80.5	42	81.0
GSVIVG01023862001	Vitis vinifera	HOM05D003891	ORTHO05D004802	7.0e-14	80.5	41	82.9
CAN.G234.2	Capsicum annuum	HOM05D003891	ORTHO05D004802	9.1e-14	80.1	42	81.0
Glyma.09G154000	Glycine max	HOM05D003891	ORTHO05D004802	9.1e-14	80.1	41	80.5
Nitab4.5_0001700g0070	Nicotiana tabacum	HOM05D003891	ORTHO05D004802	9.1e-14	80.1	42	78.6
CiPaw.06G114500	Carya illinoinensis	HOM05D003891	ORTHO05D004802	1.2e-13	79.7	42	81.0
DCAR_028450	Daucus carota	HOM05D003891	ORTHO05D004802	1.2e-13	79.7	42	81.0
Thecc.02G147300	Theobroma cacao	HOM05D003891	ORTHO05D004802	1.2e-13	79.7	42	78.6
ClCG02G003290	Citrullus lanatus	HOM05D003891	ORTHO05D004802	1.6e-13	79.3	42	78.6
MELO3C015700.2	Cucumis melo	HOM05D003891	ORTHO05D004802	1.6e-13	79.3	42	78.6
Eucgr.H04996	Eucalyptus grandis	HOM05D003891	ORTHO05D004802	1.6e-13	79.3	42	78.6
Peaxi162Scf00362g00144	Petunia axillaris	HOM05D003891	ORTHO05D004802	1.6e-13	79.3	42	78.6
Psat3g195440	Pisum sativum	HOM05D003891	ORTHO05D004802	1.6e-13	79.3	41	80.5
Potri.009G169000	Populus trichocarpa	HOM05D003891	ORTHO05D004802	1.6e-13	79.3	41	80.5
PGSC0003DMG400014681	Solanum tuberosum	HOM05D003891	ORTHO05D004802	1.6e-13	79.3	42	78.6
Sed0019069	Sechium edule	HOM05D003891	ORTHO05D004802	2.0e-13	79.0	41	80.5
THA.LOC104807410	Tarenaya hassleriana	HOM05D003891	ORTHO05D004802	2.0e-13	79.0	42	76.2
Carub.0007s0494	Capsella rubella	HOM05D003891	ORTHO05D004802	2.7e-13	78.6	42	78.6
CiPaw.05G094100	Carya illinoinensis	HOM05D003891	ORTHO05D004802	2.7e-13	78.6	42	81.0
Sp7g33150	Schrenkiella parvula	HOM05D003891	ORTHO05D004802	2.7e-13	78.6	42	78.6
TPR.G10657	Trifolium pratense	HOM05D003891	ORTHO05D004802	2.7e-13	78.6	41	80.5
MSTRG.19945	Avicennia marina	HOM05D003891	ORTHO05D004802	3.5e-13	78.2	42	78.6
A01p03200	Brassica napus	HOM05D003891	ORTHO05D004802	3.5e-13	78.2	42	78.6
C01p03550	Brassica napus	HOM05D003891	ORTHO05D004802	3.5e-13	78.2	42	78.6
BolC1t00344H	Brassica oleracea	HOM05D003891	ORTHO05D004802	3.5e-13	78.2	42	78.6
BraA01t00305Z	Brassica rapa	HOM05D003891	ORTHO05D004802	3.5e-13	78.2	42	78.6
TWI75G0797	Tripterygium wilfordii	HOM05D003891	ORTHO05D004802	3.5e-13	78.2	42	78.6
CANSAT25G0951	Cannabis sativa	HOM05D003891	ORTHO05D004802	4.5e-13	77.8	42	78.6
Ca_25233_v3	Cicer arietinum L.	HOM05D003891	ORTHO05D004802	4.5e-13	77.8	41	78.0
Ciclev10028695m.g	Citrus clementina	HOM05D003891	ORTHO05D004802	4.5e-13	77.8	42	76.2
Sed0009963	Sechium edule	HOM05D003891	ORTHO05D004802	4.5e-13	77.8	41	78.0
SGA_v2.0_scaffold32G13353	Striga asiatica	HOM05D003891	ORTHO05D004802	4.5e-13	77.8	42	76.2
TAR628G0887	Trochodendron aralioides	HOM05D003891	ORTHO05D004802	4.5e-13	77.8	42	73.8
Duzib132G1166	Durio zibethinus	HOM05D003891	ORTHO05D004802	5.9e-13	77.4	42	76.2
Gohir.A13G064300	Gossypium hirsutum	HOM05D003891	ORTHO05D004802	5.9e-13	77.4	42	76.2
Gohir.D13G057500	Gossypium hirsutum	HOM05D003891	ORTHO05D004802	5.9e-13	77.4	42	76.2
Sabra09G0131200	Salix brachista	HOM05D000037	ORTHO05D004802	5.9e-13	77.4	41	78.0
Aa31LG2G14970	Aethionema arabicum	HOM05D003891	ORTHO05D004802	7.7e-13	77.0	42	76.2
CAN.G1645.6	Capsicum annuum	HOM05D003891	ORTHO05D004802	7.7e-13	77.0	41	75.6
Psat1g106000	Pisum sativum	HOM05D003891	ORTHO05D004802	7.7e-13	77.0	41	78.0
PGR042G1041	Punica granatum	HOM05D003891	ORTHO05D004802	7.7e-13	77.0	42	76.2
Ah.01g017670	Amaranthus hybridus	HOM05D003891	ORTHO05D004802	1.0e-12	76.6	42	76.2
BcaNung00603	Brassica carinata	HOM05D003891	ORTHO05D004802	1.0e-12	76.6	42	76.2
CARHR243690	Cardamine hirsuta	HOM05D003891	ORTHO05D004802	1.0e-12	76.6	42	76.2
Thhalv10025517m.g	Eutrema salsugineum	HOM05D003891	ORTHO05D004802	1.0e-12	76.6	42	73.8
Lj2g0023729	Lotus japonicus	HOM05D003891	ORTHO05D004802	1.3e-12	76.3	41	78.0
AL3G50210	Arabidopsis lyrata	HOM05D003891	ORTHO05D004802	1.7e-12	75.9	40	80.0
EL10Ac9g21550	Beta vulgaris	HOM05D003891	ORTHO05D004802	1.7e-12	75.9	42	73.8
Gorai.013G064800	Gossypium raimondii	HOM05D003891	ORTHO05D004802	1.7e-12	75.9	42	73.8
AL7G15800	Arabidopsis lyrata	HOM05D003891	ORTHO05D004802	2.3e-12	75.5	42	76.2
Carub.0003s3134	Capsella rubella	HOM05D003891	ORTHO05D004802	2.3e-12	75.5	42	73.8
Lalb_Chr19g0131341	Lupinus albus	HOM05D003891	ORTHO05D004802	2.3e-12	75.5	41	75.6
AT4G35360	Arabidopsis thaliana	HOM05D003891	ORTHO05D004802	2.9e-12	75.1	42	76.2
CARHR107450	Cardamine hirsuta	HOM05D003891	ORTHO05D004802	2.9e-12	75.1	41	75.6
Solyc10g074590.2	Solanum lycopersicum	HOM05D003891	ORTHO05D004802	2.9e-12	75.1	42	76.2
Sopen10g027080	Solanum pennellii	HOM05D003891	ORTHO05D004802	2.9e-12	75.1	42	76.2
AUR62013187	Chenopodium quinoa	HOM05D003891	ORTHO05D004802	3.8e-12	74.7	42	71.4
Lalb_Chr03g0033131	Lupinus albus	HOM05D003891	ORTHO05D004802	3.8e-12	74.7	41	75.6
SalBow1G5213	Salvia bowleyana	HOM05D003891	ORTHO05D004802	5.0e-12	74.3	43	67.4
Carub.0003s3137	Capsella rubella	HOM05D003891	ORTHO05D004802	6.6e-12	73.9	42	73.8
Cpa.g.sc232.5	Carica papaya	HOM05D003891	ORTHO05D004802	6.6e-12	73.9	42	71.4
PSO210G7370	Papaver somniferum	HOM05D003891	ORTHO05D004802	6.6e-12	73.9	42	71.4
PSO761G0136	Papaver somniferum	HOM05D003891	ORTHO05D004802	6.6e-12	73.9	42	71.4
AL3G50220	Arabidopsis lyrata	HOM05D003891	ORTHO05D004802	8.6e-12	73.6	42	73.8
HPP92_015472	Vanilla planifolia	HOM05D003891	ORTHO05D004802	1.1e-11	73.2	42	73.8
ATR0605G040	Amborella trichopoda	HOM05D003891	ORTHO05D004802	1.5e-11	72.8	42	69.0
AT2G17340	Arabidopsis thaliana	HOM05D003891	ORTHO05D004802	1.5e-11	72.8	42	73.8
Manes.15G113400	Manihot esculenta	HOM05D003891	ORTHO05D004802	1.5e-11	72.8	42	69.0
Os06g0325500	Oryza sativa ssp. japonica	HOM05D003891	ORTHO05D004802	1.5e-11	72.8	42	73.8
Phvul.007G111800	Phaseolus vulgaris	HOM05D003891	ORTHO05D004802	1.5e-11	72.8	41	68.3
Potri.004G207700	Populus trichocarpa	HOM05D003891	ORTHO05D004802	1.5e-11	72.8	41	73.2
Sabra04G0139800	Salix brachista	HOM05D003891	ORTHO05D004802	1.5e-11	72.8	41	70.7
Ca_09894_v3	Cicer arietinum L.	HOM05D003891	ORTHO05D004802	1.9e-11	72.4	50	54.0
CDE10G0412	Ceratophyllum demersum	HOM05D003891	ORTHO05D004802	2.5e-11	72.0	40	72.5
unitig_21.g20520	Utricularia gibba	HOM05D003891	ORTHO05D004802	2.5e-11	72.0	41	73.2
Medtr6g060550	Medicago truncatula	HOM05D003891	ORTHO05D004802	4.2e-11	71.2	41	73.2
AT2G17320	Arabidopsis thaliana	HOM05D003891	ORTHO05D004802	7.2e-11	70.5	42	69.0
Glyma.20G212500	Glycine max	HOM05D003891	ORTHO05D004802	7.2e-11	70.5	41	65.9
Lalb_Chr21g0311861	Lupinus albus	HOM05D003891	ORTHO05D004802	7.2e-11	70.5	41	68.3
VMungo0720G0968	Vigna mungo	HOM05D003891	ORTHO05D004802	1.6e-10	69.3	39	66.7
Oeu052171.1	Olea europaea	HOM05D003891	ORTHO05D004802	2.1e-10	68.9	35	85.7
Aa31LG8G14670	Aethionema arabicum	HOM05D003891	ORTHO05D004802	4.7e-10	67.8	42	66.7
arahy.Tifrunner.gnm1.ann1.94LQT9	Arachis hypogaea	HOM05D003891	ORTHO05D004802	4.7e-10	67.8	49	55.1
arahy.Tifrunner.gnm1.ann1.QM8NH2	Arachis hypogaea	HOM05D003891	ORTHO05D004802	4.7e-10	67.8	49	55.1
Lalb_Chr21g0311871	Lupinus albus	HOM05D003891	ORTHO05D004802	6.1e-10	67.4	41	63.4
ATR0605G170	Amborella trichopoda	HOM05D003891	ORTHO05D004802	8.0e-10	67.0	40	70.0
Carub.0003s3136	Capsella rubella	HOM05D003891	ORTHO05D004802	8.0e-10	67.0	40	70.0
Lj5g0000118	Lotus japonicus	HOM05D003891	ORTHO05D004802	8.0e-10	67.0	41	61.0
Psat6g112760	Pisum sativum	HOM05D003891	ORTHO05D004802	8.0e-10	67.0	41	56.1
Medtr1g076720	Medicago truncatula	HOM05D003891	ORTHO05D004802	1.0e-09	66.6	39	61.5
BcaB08g34723	Brassica carinata	HOM05D003891	ORTHO05D004802	1.4e-09	66.2	42	64.3
Glyma.20G212400	Glycine max	HOM05D003891	ORTHO05D004802	1.4e-09	66.2	41	58.5
BcaC01g02934	Brassica carinata	HOM05D003891	ORTHO05D004802	1.8e-09	65.9	42	64.3
A06p34080	Brassica napus	HOM05D003891	ORTHO05D004802	1.8e-09	65.9	42	64.3
C03p58170	Brassica napus	HOM05D003891	ORTHO05D004802	1.8e-09	65.9	42	64.3
BolC3t18087H	Brassica oleracea	HOM05D003891	ORTHO05D004802	1.8e-09	65.9	42	64.3
BraA06t26341Z	Brassica rapa	HOM05D003891	ORTHO05D004802	1.8e-09	65.9	42	64.3
AUR62010186	Chenopodium quinoa	HOM05D003891	ORTHO05D004802	4.0e-09	64.7	34	76.5
Ca_09895_v3	Cicer arietinum L.	HOM05D003891	ORTHO05D004802	5.2e-09	64.3	41	56.1
TPR.G16614	Trifolium pratense	HOM05D003891	ORTHO05D004802	1.5e-08	62.8	39	56.4
Sp3g30660	Schrenkiella parvula	HOM05D003891	ORTHO05D004802	2.6e-08	62.0	42	61.9
Mapoly0021s0096	Marchantia polymorpha	HOM05D003891	ORTHO05D004802	4.4e-08	61.2	40	65.0
Medtr1g076730	Medicago truncatula	HOM05D003891	ORTHO05D004802	5.7e-08	60.8	40	60.0
SMO352G0076	Selaginella moellendorffii	HOM05D003891	ORTHO05D004802	7.5e-08	60.5	42	57.1
Solyc01g112270.1	Solanum lycopersicum	HOM05D003891	ORTHO05D004802	2.2e-07	58.9	32	75.0
Thhalv10022748m.g	Eutrema salsugineum	HOM05D003891	ORTHO05D004802	1.1e-06	56.6	43	60.5
Pp3c16_25870	Physcomitrium patens	HOM05D003891	ORTHO05D004802	7.0e-06	53.9	42	52.4
vmacro10882	Vaccinium macrocarpon	HOM05D003891	ORTHO05D004802	7.0e-06	53.9	28	78.6

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm

Tree construction algorithm

Edit MSA alignment

Interactive Phylogenetics Module

Contact Settings

Data Settings

Program Settings

About us

Support

Legal

Other