Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045866 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D112743 7.3e-59 230.3 114 100.0
CSS0034072 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 2.0e-24 115.9 63 92.1
Actinidia16326 Actinidia chinensis HOM05D000561 ORTHO05D000514 1.1e-22 110.2 63 85.7
vmacro04206 Vaccinium macrocarpon HOM05D000561 ORTHO05D000514 1.4e-22 109.8 64 85.9
Rhsim13G0222000 Rhododendron simsii HOM05D000561 ORTHO05D000514 1.9e-22 109.4 63 84.1
Duzib150G0013 Durio zibethinus HOM05D000561 ORTHO05D000514 1.1e-19 100.1 61 83.6
Haze_23125 Corylus avellana HOM05D000561 ORTHO05D000514 7.3e-19 97.4 64 73.4
QL01p004975 Quercus lobata HOM05D000561 ORTHO05D000514 7.3e-19 97.4 64 73.4
COL.COLO4_24888 Corchorus olitorius HOM05D000561 ORTHO05D000514 9.6e-19 97.1 60 80.0
Duzib170G1122 Durio zibethinus HOM05D000561 ORTHO05D000514 1.3e-18 96.7 62 77.4
Cfa009761 Carpinus fangiana HOM05D000561 ORTHO05D000514 1.6e-18 96.3 64 73.4
CSS0013113 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 3.6e-18 95.1 63 81.0
Gohir.D07G128800 Gossypium hirsutum HOM05D000561 ORTHO05D000514 4.0e-17 91.7 63 73.0
Gorai.001G139100 Gossypium raimondii HOM05D000561 ORTHO05D000514 4.0e-17 91.7 63 73.0
Gohir.A07G124500 Gossypium hirsutum HOM05D000561 ORTHO05D000514 5.3e-17 91.3 63 73.0
TWI34G1960 Tripterygium wilfordii HOM05D000561 ORTHO05D000514 5.3e-17 91.3 62 72.6
TAR636G2461 Trochodendron aralioides HOM05D000561 ORTHO05D000514 5.3e-17 91.3 64 71.9
Cpa.g.sc84.66 Carica papaya HOM05D000561 ORTHO05D000514 6.9e-17 90.9 62 72.6
MSTRG.21383 Avicennia marina HOM05D000561 ORTHO05D000514 1.2e-16 90.1 60 73.3
Thecc.09G232000 Theobroma cacao HOM05D000561 ORTHO05D000514 1.2e-16 90.1 62 72.6
Duzib168G0910 Durio zibethinus HOM05D000561 ORTHO05D000514 1.5e-16 89.7 62 75.8
Prupe.5G028700 Prunus persica HOM05D000561 ORTHO05D000514 1.5e-16 89.7 64 70.3
Oeu001477.2 Olea europaea HOM05D000003 ORTHO05D000514 2.6e-16 89.0 62 69.4
Aqoxy1G00237 Aquilegia oxysepala HOM05D000561 ORTHO05D000514 3.4e-16 88.6 64 67.2
Gohir.A08G013600 Gossypium hirsutum HOM05D000561 ORTHO05D000514 3.4e-16 88.6 64 73.4
Gohir.D08G024100 Gossypium hirsutum HOM05D000561 ORTHO05D000514 3.4e-16 88.6 64 73.4
Gorai.004G019500 Gossypium raimondii HOM05D000561 ORTHO05D000514 3.4e-16 88.6 64 73.4
HanXRQChr13g0405951 Helianthus annuus HOM05D000561 ORTHO05D000514 9.9e-16 87.0 59 72.9
Peaxi162Scf01398g00012 Petunia axillaris HOM05D000561 ORTHO05D000514 1.3e-15 86.7 63 68.3
Sopen11g025610 Solanum pennellii HOM05D000561 ORTHO05D000514 1.7e-15 86.3 63 66.7
Cc02_g33880 Coffea canephora HOM05D000561 ORTHO05D000514 2.2e-15 85.9 61 72.1
MBI01_g18892_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D000514 3.8e-15 85.1 63 66.7
Nitab4.5_0006994g0030 Nicotiana tabacum HOM05D000561 ORTHO05D000514 3.8e-15 85.1 64 64.1
CANSAT54G1581 Cannabis sativa HOM05D000561 ORTHO05D000514 4.9e-15 84.7 64 65.6
Solyc11g065880.2 Solanum lycopersicum HOM05D000561 ORTHO05D000514 4.9e-15 84.7 63 65.1
CiPaw.14G119600 Carya illinoinensis HOM05D000561 ORTHO05D000514 8.4e-15 84.0 51 82.4
Nitab4.5_0005819g0030 Nicotiana tabacum HOM05D000561 ORTHO05D000514 1.1e-14 83.6 63 63.5
GSVIVG01025280001 Vitis vinifera HOM05D000561 ORTHO05D000514 1.1e-14 83.6 55 78.2
EL10Ac4g10266 Beta vulgaris HOM05D000561 ORTHO05D000514 1.4e-14 83.2 64 64.1
EL10Ac4g10282 Beta vulgaris HOM05D000561 ORTHO05D000514 1.4e-14 83.2 64 64.1
AUR62019286 Chenopodium quinoa HOM05D000561 ORTHO05D000514 1.4e-14 83.2 61 67.2
Nn2g15468 Nelumbo nucifera HOM05D000561 ORTHO05D000514 1.4e-14 83.2 62 64.5
PGSC0003DMG400007361 Solanum tuberosum HOM05D000561 ORTHO05D000514 1.4e-14 83.2 64 62.5
Migut.D00595 Erythranthe guttata HOM05D000561 ORTHO05D000514 1.9e-14 82.8 65 63.1
Hma1.2p1_0606F.1_g188060 Hydrangea macrophylla HOM05D000561 ORTHO05D000514 3.2e-14 82.0 85 56.5
Manes.14G001900 Manihot esculenta HOM05D000561 ORTHO05D000514 1.2e-13 80.1 62 66.1
Aa31LG11G5050 Aethionema arabicum HOM05D000561 ORTHO05D000514 1.6e-13 79.7 60 65.0
PSO339G4568 Papaver somniferum HOM05D000561 ORTHO05D000514 1.6e-13 79.7 63 66.7
Hund07519 Selenicereus undatus HOM05D000561 ORTHO05D000514 2.1e-13 79.3 58 67.2
Potri.009G054400 Populus trichocarpa HOM05D000561 ORTHO05D000514 2.7e-13 79.0 64 64.1
AT5G19350 Arabidopsis thaliana HOM05D000561 ORTHO05D000514 7.9e-13 77.4 60 63.3
Glyma.13G340200 Glycine max HOM05D000561 ORTHO05D000514 7.9e-13 77.4 65 61.5
ATR0605G067 Amborella trichopoda HOM05D000561 ORTHO05D000514 1.0e-12 77.0 54 63.0
PSO384G1656 Papaver somniferum HOM05D000561 ORTHO05D000514 1.0e-12 77.0 62 66.1
Oeu023360.2 Olea europaea HOM05D000030 ORTHO05D000009 1.8e-12 76.3 62 61.3
SalBow2G0499 Salvia bowleyana HOM05D000561 ORTHO05D000514 1.8e-12 76.3 63 60.3
Lsat_1_v5_gn_1_66300 Lactuca sativa HOM05D000561 ORTHO05D000514 2.3e-12 75.9 58 65.5
Glyma.15G034200 Glycine max HOM05D000561 ORTHO05D000514 3.0e-12 75.5 65 61.5
THA.LOC104811163 Tarenaya hassleriana HOM05D000561 ORTHO05D000514 3.0e-12 75.5 58 63.8
Ca_01295_v3 Cicer arietinum L. HOM05D000561 ORTHO05D000514 5.1e-12 74.7 61 63.9
MD03G1176800 Malus domestica HOM05D000561 ORTHO05D000514 6.7e-12 74.3 64 64.1
RcHm_v2.0_Chr3g0491021 Rosa chinensis HOM05D000561 ORTHO05D000514 6.7e-12 74.3 55 67.3
SalBow6G1629 Salvia bowleyana HOM05D000561 ORTHO05D000514 6.7e-12 74.3 63 58.7
AUR62000109 Chenopodium quinoa HOM05D000561 ORTHO05D000514 8.7e-12 73.9 61 60.7
Medtr2g097960 Medicago truncatula HOM05D000561 ORTHO05D000514 8.7e-12 73.9 64 59.4
DCAR_029947 Daucus carota HOM05D000561 ORTHO05D000514 1.1e-11 73.6 64 62.5
Os03g0174100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D000514 1.5e-11 73.2 63 57.1
PGR119G1727 Punica granatum HOM05D000561 ORTHO05D000514 1.5e-11 73.2 64 62.5
Atru.chr3.2740 Acer truncatum HOM05D000561 ORTHO05D000514 1.9e-11 72.8 49 73.5
ECA248G2811 Erigeron canadensis HOM05D000561 ORTHO05D000514 1.9e-11 72.8 56 66.1
Sabra09G0039700 Salix brachista HOM05D000561 ORTHO05D000514 2.5e-11 72.4 62 62.9
TPR.G6890 Trifolium pratense HOM05D000561 ORTHO05D000514 2.5e-11 72.4 65 60.0
MD11G1197600 Malus domestica HOM05D000561 ORTHO05D000514 3.3e-11 72.0 64 57.8
Phvul.L009343 Phaseolus vulgaris HOM05D000561 ORTHO05D000514 4.3e-11 71.6 62 61.3
AL6G30840 Arabidopsis lyrata HOM05D000561 ORTHO05D000514 5.6e-11 71.2 60 58.3
Psat5g286480 Pisum sativum HOM05D000561 ORTHO05D000514 7.4e-11 70.9 51 70.6
Zm00001eb005630 Zea mays HOM05D000561 ORTHO05D000514 7.4e-11 70.9 86 43.0
CSS0025411 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 9.6e-11 70.5 55 63.6
CDE10G0196 Ceratophyllum demersum HOM05D000561 ORTHO05D000514 9.6e-11 70.5 59 62.7
arahy.Tifrunner.gnm1.ann1.Z4F097 Arachis hypogaea HOM05D000561 ORTHO05D000514 2.8e-10 68.9 63 57.1
arahy.Tifrunner.gnm1.ann1.GE7Z65 Arachis hypogaea HOM05D000561 ORTHO05D000514 3.6e-10 68.6 62 58.1
Ah.06g194320 Amaranthus hybridus HOM05D000561 ORTHO05D000514 6.2e-10 67.8 60 61.7
Glyma.11G133200 Glycine max HOM05D000561 ORTHO05D000514 1.1e-09 67.0 63 54.0
Sp6g25060 Schrenkiella parvula HOM05D000561 ORTHO05D000514 1.4e-09 66.6 60 55.0
Glyma.12G057300 Glycine max HOM05D000561 ORTHO05D000514 1.8e-09 66.2 63 52.4
Sed0011306 Sechium edule HOM05D000561 ORTHO05D000514 6.9e-09 64.3 61 55.7
VMungo1127G1920 Vigna mungo HOM05D000561 ORTHO05D000514 9.0e-09 63.9 63 52.4
Lj3g0003681 Lotus japonicus HOM05D000561 ORTHO05D000514 1.2e-08 63.5 63 47.6
Actinidia06901 Actinidia chinensis HOM05D000561 ORTHO05D000514 1.5e-08 63.2 35 85.7
BcaB01g05142 Brassica carinata HOM05D000561 ORTHO05D000514 2.6e-08 62.4 60 51.7
C03p11030 Brassica napus HOM05D000561 ORTHO05D000514 2.6e-08 62.4 60 51.7
BolC3t13572H Brassica oleracea HOM05D000561 ORTHO05D000514 2.6e-08 62.4 60 51.7
Phvul.011G059300 Phaseolus vulgaris HOM05D000561 ORTHO05D000514 2.6e-08 62.4 63 50.8
Lj3g0012879 Lotus japonicus HOM05D000561 ORTHO05D000514 3.4e-08 62.0 65 50.8
A03p09450 Brassica napus HOM05D000561 ORTHO05D000514 5.8e-08 61.2 60 50.0
BraA03t10263Z Brassica rapa HOM05D000561 ORTHO05D000514 5.8e-08 61.2 60 50.0
Lalb_Chr01g0003351 Lupinus albus HOM05D000561 ORTHO05D000514 5.8e-08 61.2 63 50.8
SGA_v2.0_scaffold247G44873 Striga asiatica HOM05D000561 ORTHO05D000514 5.8e-08 61.2 61 54.1
BcaNung07025 Brassica carinata HOM05D000561 ORTHO05D000514 9.9e-08 60.5 58 51.7
ClCG01G004050 Citrullus lanatus HOM05D000561 ORTHO05D000514 1.3e-07 60.1 54 61.1
Eucgr.J00778 Eucalyptus grandis HOM05D000561 ORTHO05D000514 1.3e-07 60.1 40 72.5
VMungo1080G0863 Vigna mungo HOM05D000561 ORTHO05D000514 1.3e-07 60.1 62 51.6
Pp3c12_10910 Physcomitrium patens HOM05D000561 ORTHO05D000514 1.7e-07 59.7 61 49.2
Pp3c12_10960 Physcomitrium patens HOM05D000561 ORTHO05D000514 1.7e-07 59.7 61 49.2
BcaB01g04865 Brassica carinata HOM05D000561 ORTHO05D000514 2.2e-07 59.3 58 50.0
A10p20330 Brassica napus HOM05D000561 ORTHO05D000514 8.4e-07 57.4 58 50.0
C09p56930 Brassica napus HOM05D000561 ORTHO05D000514 8.4e-07 57.4 58 50.0
BolC9t58547H Brassica oleracea HOM05D000561 ORTHO05D000514 8.4e-07 57.4 58 50.0
BraA10t44104Z Brassica rapa HOM05D000561 ORTHO05D000514 8.4e-07 57.4 58 50.0
Thhalv10013617m.g Eutrema salsugineum HOM05D000561 ORTHO05D000514 8.4e-07 57.4 62 46.8
Pp3c4_13300 Physcomitrium patens HOM05D000561 ORTHO05D000514 1.9e-06 56.2 52 55.8
Carub.0006s1769 Capsella rubella HOM05D000561 ORTHO05D000514 5.5e-06 54.7 58 51.7
SEGI_29644 Sequoiadendron giganteum HOM05D000561 ORTHO05D000514 7.1e-06 54.3 55 50.9

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (2 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (0 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (1 genes)
Davidia involucrata (0 genes)
Durio zibethinus (3 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (4 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (3 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings