Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 9.3e-150 533.5 266 100.0
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 4.0e-76 288.9 265 59.6
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 3.4e-75 285.8 249 63.1
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 9.6e-70 267.7 216 66.7
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 9.3e-65 251.1 271 52.8
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 1.1e-60 237.7 248 55.2
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 1.5e-59 233.8 259 54.4
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 2.6e-59 233.0 248 53.2
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 8.4e-58 228.0 248 53.2
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 5.1e-55 218.8 250 54.0
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 1.9e-54 216.9 257 49.4
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 7.4e-54 214.9 248 54.4
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 2.1e-53 213.4 268 50.0
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 1.8e-52 210.3 249 51.0
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 4.0e-52 209.1 294 46.6
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 9.0e-52 208.0 245 53.9
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.2e-51 207.6 258 50.8
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 4.5e-51 205.7 273 48.7
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 4.5e-51 205.7 258 50.8
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 2.2e-50 203.4 266 48.5
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 2.2e-50 203.4 247 49.0
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 2.4e-49 199.9 254 50.4
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 9.3e-49 198.0 249 51.4
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 2.7e-48 196.4 251 47.4
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 1.8e-47 193.7 247 51.4
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 2.3e-47 193.4 237 51.9
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 1.5e-46 190.7 249 46.6
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 2.1e-45 186.8 226 54.0
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 2.4e-44 183.3 277 41.5
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 9.0e-44 181.4 333 38.7
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 2.6e-43 179.9 250 43.2
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 2.6e-43 179.9 247 45.7
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 2.9e-42 176.4 251 43.4
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 3.8e-42 176.0 226 47.8
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 2.5e-41 173.3 254 47.2
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.2e-41 172.9 242 43.4
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 7.9e-40 168.3 242 42.6
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 7.9e-40 168.3 277 40.4
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 5.1e-39 165.6 255 47.1
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 5.1e-39 165.6 255 46.7
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 6.7e-39 165.2 250 42.8
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 1.1e-38 164.5 252 46.8
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 1.5e-38 164.1 268 39.6
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 3.3e-38 162.9 261 41.0
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 1.6e-37 160.6 275 38.9
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 1.8e-36 157.1 231 43.7
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 2.4e-36 156.8 243 46.1
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 2.4e-36 156.8 268 38.4
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 3.1e-36 156.4 308 40.3
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 3.1e-36 156.4 266 42.5
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 6.9e-36 155.2 297 35.4
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 2.6e-35 153.3 251 42.2
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 7.6e-35 151.8 251 43.0
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 8.5e-34 148.3 243 41.6
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 8.5e-34 148.3 243 41.6
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 4.2e-33 146.0 231 42.9
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 5.5e-33 145.6 256 40.2
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 6.1e-32 142.1 243 40.7
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 1.0e-31 141.4 251 37.8
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.4e-31 141.0 242 40.9
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 3.9e-31 139.4 199 44.2
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 1.1e-30 137.9 247 36.4
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 2.2e-29 133.7 243 37.9
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 1.1e-28 131.3 249 38.2
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 2.5e-25 120.2 238 37.0
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 7.2e-25 118.6 253 34.0
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 7.9e-24 115.2 236 39.0
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 8.8e-23 111.7 188 40.4
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 6.3e-21 105.5 244 34.8
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 1.1e-20 104.8 237 37.1
Oeu037282.1 Olea europaea HOM05D006273 ORTHO05D007607 4.1e-20 102.8 240 35.8
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 4.2e-17 92.8 258 34.9
Actinidia00372 Actinidia chinensis HOM05D006273 ORTHO05D007607 1.2e-16 91.3 105 53.3
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 2.1e-16 90.5 245 34.3
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 3.6e-16 89.7 242 33.9
Dinv15806 Davidia involucrata HOM05D006273 ORTHO05D007607 3.0e-15 86.7 71 64.8
FvH4_2g03741 Fragaria vesca HOM05D006273 ORTHO05D007607 5.2e-15 85.9 119 49.6
AUR62017546 Chenopodium quinoa HOM05D006273 ORTHO05D007607 6.7e-15 85.5 214 32.2
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 3.3e-14 83.2 266 32.7
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 4.4e-14 82.8 249 32.1
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 7.4e-14 82.0 273 31.9
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 7.4e-14 82.0 248 34.3
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 9.7e-14 81.6 232 32.8
TPR.G8308 Trifolium pratense HOM05D006273 ORTHO05D007607 1.3e-13 81.3 202 37.1
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 1.7e-13 80.9 252 31.3
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 1.7e-13 80.9 288 33.0
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 2.2e-13 80.5 246 32.1
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 2.2e-13 80.5 252 33.7
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 1.1e-12 78.2 244 33.6
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 2.4e-12 77.0 248 32.7
Hund24138 Selenicereus undatus HOM05D006273 ORTHO05D007607 4.1e-12 76.3 104 41.3
AUR62025214 Chenopodium quinoa HOM05D000052 ORTHO05D007607 5.3e-12 75.9 83 43.4
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 1.2e-11 74.7 268 30.2
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 2.0e-11 73.9 266 30.8
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 3.5e-11 73.2 245 29.0
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 2.2e-10 70.5 245 31.4
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 2.2e-10 70.5 145 37.2
Actinidia27988 Actinidia chinensis HOM05D006273 ORTHO05D007607 3.8e-10 69.7 45 80.0
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 3.8e-10 69.7 183 37.2
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 6.5e-10 68.9 246 29.7
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 8.5e-10 68.6 164 36.0
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 1.9e-09 67.4 157 32.5
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 2.5e-09 67.0 248 29.4
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 5.5e-09 65.9 252 31.0
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 2.1e-08 63.9 251 29.9
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 2.1e-08 63.9 100 34.0
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 1.0e-07 61.6 242 28.9
CDE02G4649 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 2.3e-07 60.5 167 30.5
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 4.0e-07 59.7 168 36.3
AT3G19650 Arabidopsis thaliana HOM05D006273 ORTHO05D007607 8.8e-07 58.5 247 27.5
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 4.4e-06 56.2 246 28.0
Psat4g227520 Pisum sativum HOM05D006273 ORTHO05D007607 7.5e-06 55.5 169 34.3
SHI05153 Sapria himalayana HOM05D006273 ORTHO05D007607 7.5e-06 55.5 205 27.8

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (1 genes)
Brassica oleracea (1 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (5 genes)
Glycine max (4 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings