Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045444 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 3.5e-46 188.0 98 100.0
CSS0003656 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 2.5e-44 181.8 98 95.9
CSS0005454 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 7.4e-28 127.1 85 78.8
CSS0011696 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 7.4e-28 127.1 85 78.8
Dinv04064 Davidia involucrata HOM05D007513 ORTHO05D008148 3.7e-27 124.8 85 75.3
Actinidia03699 Actinidia chinensis HOM05D007513 ORTHO05D008148 1.1e-26 123.2 85 71.8
Dinv26918 Davidia involucrata HOM05D007513 ORTHO05D008148 9.1e-26 120.2 83 74.7
Manes.13G112700 Manihot esculenta HOM05D007513 ORTHO05D008148 3.2e-23 111.7 88 67.0
Rhsim11G0028000 Rhododendron simsii HOM05D007513 ORTHO05D008148 9.4e-23 110.2 83 66.3
Lsat_1_v5_gn_8_19701 Lactuca sativa HOM05D007513 ORTHO05D008148 3.6e-22 108.2 83 67.5
Atru.chr3.153 Acer truncatum HOM05D007513 ORTHO05D008148 6.1e-22 107.5 87 63.2
vmacro14398 Vaccinium macrocarpon HOM05D007513 ORTHO05D008148 8.0e-22 107.1 77 68.8
Lsat_1_v5_gn_8_17020 Lactuca sativa HOM05D007513 ORTHO05D008148 1.0e-21 106.7 82 67.1
ClCG10G015420 Citrullus lanatus HOM05D007513 ORTHO05D008148 2.3e-21 105.5 75 69.3
Hma1.2p1_0730F.1_g209790 Hydrangea macrophylla HOM05D007513 ORTHO05D008148 2.3e-21 105.5 81 66.7
CsaV3_3G041080 Cucumis sativus L. HOM05D007513 ORTHO05D008148 3.0e-21 105.1 75 69.3
HanXRQChr08g0219071 Helianthus annuus HOM05D007513 ORTHO05D008148 5.2e-21 104.4 82 65.9
HanXRQChr08g0219141 Helianthus annuus HOM05D007513 ORTHO05D008148 5.2e-21 104.4 82 65.9
TAR381G0870 Trochodendron aralioides HOM05D001879 ORTHO05D007648 5.2e-21 104.4 86 61.6
Potri.009G004400 Populus trichocarpa HOM05D007513 ORTHO05D008148 6.7e-21 104.0 75 72.0
Atru.chr3.182 Acer truncatum HOM05D007513 ORTHO05D008148 8.8e-21 103.6 87 60.9
Eucgr.A01208 Eucalyptus grandis HOM05D007513 ORTHO05D008148 8.8e-21 103.6 88 61.4
CiPaw.02G003300 Carya illinoinensis HOM05D007513 ORTHO05D008148 1.5e-20 102.8 85 62.4
Ciclev10023109m.g Citrus clementina HOM05D007513 ORTHO05D008148 2.6e-20 102.1 86 61.6
TWI73G0368 Tripterygium wilfordii HOM05D007513 ORTHO05D008148 3.3e-20 101.7 85 61.2
ECA233G3995 Erigeron canadensis HOM05D007513 ORTHO05D008148 1.3e-19 99.8 82 63.4
Cc04_g16170 Coffea canephora HOM05D007513 ORTHO05D008148 2.2e-19 99.0 80 62.5
vmacro07203 Vaccinium macrocarpon HOM05D007513 ORTHO05D008148 2.8e-19 98.6 88 60.2
TWI09G0373 Tripterygium wilfordii HOM05D007513 ORTHO05D008148 4.8e-19 97.8 71 66.2
Sed0010624 Sechium edule HOM05D007513 ORTHO05D008148 8.2e-19 97.1 69 66.7
GSVIVG01023476001 Vitis vinifera HOM05D007513 ORTHO05D008148 3.1e-18 95.1 75 64.0
Thecc.01G071100 Theobroma cacao HOM05D007513 ORTHO05D008148 4.1e-18 94.7 98 54.1
CANSAT01G0833 Cannabis sativa HOM05D007513 ORTHO05D008148 1.2e-17 93.2 74 63.5
unitig_0.g544 Utricularia gibba HOM05D007513 ORTHO05D008148 1.2e-17 93.2 77 63.6
SGA_v2.0_scaffold486G52374 Striga asiatica HOM05D007513 ORTHO05D008148 1.6e-17 92.8 80 57.5
Duzib264G1124 Durio zibethinus HOM05D007513 ORTHO05D008148 7.7e-17 90.5 92 54.3
MELO3C030975.2 Cucumis melo HOM05D007513 ORTHO05D008148 1.3e-16 89.7 66 66.7
MD15G1295400 Malus domestica HOM05D007513 ORTHO05D008148 1.7e-16 89.4 86 59.3
Gohir.D03G027900 Gossypium hirsutum HOM05D007513 ORTHO05D008148 8.5e-16 87.0 66 63.6
Sc16g0003000 Simmondsia chinensis HOM05D007513 ORTHO05D008148 1.9e-15 85.9 77 58.4
Medtr4g088715 Medicago truncatula HOM05D007513 ORTHO05D008148 2.5e-15 85.5 74 58.1
Nitab4.5_0000714g0120 Nicotiana tabacum HOM05D007513 ORTHO05D008148 2.5e-15 85.5 83 55.4
TPR.G24448 Trifolium pratense HOM05D007513 ORTHO05D008148 2.5e-15 85.5 74 59.5
Aqoxy7G03437 Aquilegia oxysepala HOM05D007513 ORTHO05D008148 3.2e-15 85.1 83 54.2
SalBow6G0964 Salvia bowleyana HOM05D007513 ORTHO05D008148 5.5e-15 84.3 85 51.8
CDE07G2080 Ceratophyllum demersum HOM05D007513 ORTHO05D008148 7.2e-15 84.0 73 54.8
AUR62016920 Chenopodium quinoa HOM05D007513 ORTHO05D008148 9.4e-15 83.6 76 59.2
DCAR_013160 Daucus carota HOM05D007513 ORTHO05D008148 9.4e-15 83.6 57 71.9
MD02G1183800 Malus domestica HOM05D007513 ORTHO05D008148 9.4e-15 83.6 87 55.2
Nitab4.5_0001417g0120 Nicotiana tabacum HOM05D007513 ORTHO05D008148 1.6e-14 82.8 58 65.5
arahy.Tifrunner.gnm1.ann1.LDCV9W Arachis hypogaea HOM05D007513 ORTHO05D008148 2.1e-14 82.4 67 59.7
Psat6g024240 Pisum sativum HOM05D007513 ORTHO05D008148 2.1e-14 82.4 72 56.9
Ca_18552_v3 Cicer arietinum L. HOM05D007513 ORTHO05D008148 2.7e-14 82.0 61 62.3
Prupe.6G222400 Prunus persica HOM05D007513 ORTHO05D008148 3.6e-14 81.6 57 70.2
Psat6g076840 Pisum sativum HOM05D007513 ORTHO05D008148 4.7e-14 81.3 58 63.8
PGR102G1378 Punica granatum HOM05D007513 ORTHO05D008148 6.1e-14 80.9 66 60.6
arahy.Tifrunner.gnm1.ann1.8F1CK2 Arachis hypogaea HOM05D007513 ORTHO05D008148 1.0e-13 80.1 92 46.7
arahy.Tifrunner.gnm1.ann1.P2RW0X Arachis hypogaea HOM05D007513 ORTHO05D008148 1.4e-13 79.7 92 46.7
DCAR_017173 Daucus carota HOM05D007513 ORTHO05D008148 1.4e-13 79.7 96 47.9
Glyma.06G321800 Glycine max HOM05D007513 ORTHO05D008148 1.8e-13 79.3 62 59.7
arahy.Tifrunner.gnm1.ann1.QIRY5C Arachis hypogaea HOM05D007513 ORTHO05D008148 8.8e-13 77.0 84 50.0
HPP92_010626 Vanilla planifolia HOM05D007513 ORTHO05D008148 1.2e-12 76.6 60 60.0
Phvul.005G004100 Phaseolus vulgaris HOM05D007513 ORTHO05D008148 2.0e-12 75.9 59 57.6
Os03g0205150 Oryza sativa ssp. japonica HOM05D007513 ORTHO05D008148 3.4e-12 75.1 62 51.6
HPP92_010652 Vanilla planifolia HOM05D007513 ORTHO05D008148 7.5e-12 73.9 92 45.7
VMungo1080G1633 Vigna mungo HOM05D007513 ORTHO05D008148 7.5e-12 73.9 56 58.9
Thhalv10027185m.g Eutrema salsugineum HOM05D007513 ORTHO05D008148 1.7e-11 72.8 82 43.9
Solyc03g044080.4 Solanum lycopersicum HOM05D007513 ORTHO05D008148 1.7e-11 72.8 73 49.3
Aa31LG6G14500 Aethionema arabicum HOM05D007513 ORTHO05D008148 2.8e-11 72.0 64 51.6
Ah.14g088990 Amaranthus hybridus HOM05D007513 ORTHO05D008148 3.7e-11 71.6 59 55.9
PGSC0003DMG400014868 Solanum tuberosum HOM05D007513 ORTHO05D008148 4.8e-11 71.2 73 50.7
EL10Ac8g20627 Beta vulgaris HOM05D007513 ORTHO05D008148 8.3e-11 70.5 82 43.9
Glyma.04G112900 Glycine max HOM05D007513 ORTHO05D008148 8.3e-11 70.5 60 56.7
Lalb_Chr08g0235081 Lupinus albus HOM05D007513 ORTHO05D008148 8.3e-11 70.5 57 54.4
BcaNung02934 Brassica carinata HOM05D014277 ORTHO05D008148 2.4e-10 68.9 82 43.9
Cpa.g.sc6.31 Carica papaya HOM05D007513 ORTHO05D008148 2.4e-10 68.9 69 55.1
FvH4_1g17450 Fragaria vesca HOM05D015974 ORTHO05D008148 2.4e-10 68.9 90 44.4
FAN19G1675 Fragaria x ananassa HOM05D015974 ORTHO05D008148 2.4e-10 68.9 90 44.4
FAN28G2668 Fragaria x ananassa HOM05D015974 ORTHO05D008148 2.4e-10 68.9 90 44.4
Carub.0004s0224 Capsella rubella HOM05D007513 ORTHO05D008148 3.1e-10 68.6 66 48.5
Lalb_Chr24g0403261 Lupinus albus HOM05D007513 ORTHO05D008148 3.1e-10 68.6 57 52.6
Peaxi162Scf00118g02024 Petunia axillaris HOM05D007513 ORTHO05D008148 7.0e-10 67.4 87 42.5
FAN23G1252 Fragaria x ananassa HOM05D015974 ORTHO05D008148 9.1e-10 67.0 90 43.3
Gohir.A02G152300 Gossypium hirsutum HOM05D045493 ORTHO05D008148 2.7e-09 65.5 144 36.1
RcHm_v2.0_Chr5g0053551 Rosa chinensis HOM05D015974 ORTHO05D008148 4.5e-09 64.7 90 43.3
BcaB03g12338 Brassica carinata HOM05D007513 ORTHO05D008148 7.7e-09 63.9 87 35.6
C07p62480 Brassica napus HOM05D014277 ORTHO05D008148 7.7e-09 63.9 82 41.5
arahy.Tifrunner.gnm1.ann1.S3QGNL Arachis hypogaea HOM05D000640 ORTHO05D008148 1.0e-08 63.5 46 65.2
A08p22690 Brassica napus HOM05D007513 ORTHO05D008148 1.0e-08 63.5 87 34.5
Thhalv10000379m.g Eutrema salsugineum HOM05D007513 ORTHO05D008148 1.3e-08 63.2 60 50.0
PSO170G3772 Papaver somniferum HOM05D007513 ORTHO05D008148 1.3e-08 63.2 77 45.5
arahy.Tifrunner.gnm1.ann1.043Q1E Arachis hypogaea HOM05D005922 ORTHO05D006934 1.7e-08 62.8 49 59.2
COL.COLO4_11560 Corchorus olitorius HOM05D007513 ORTHO05D008148 1.7e-08 62.8 70 51.4
BcaC01g00397 Brassica carinata HOM05D007513 ORTHO05D008148 2.2e-08 62.4 87 34.5
BolC3t20170H Brassica oleracea HOM05D007513 ORTHO05D008148 2.2e-08 62.4 87 34.5
BraA08t34236Z Brassica rapa HOM05D007513 ORTHO05D008148 2.2e-08 62.4 87 34.5
THA.LOC104807627 Tarenaya hassleriana HOM05D007513 ORTHO05D008148 2.2e-08 62.4 88 42.0
arahy.Tifrunner.gnm1.ann1.QIF42D Arachis hypogaea HOM05D007513 ORTHO05D008148 2.9e-08 62.0 67 50.7
arahy.Tifrunner.gnm1.ann1.X3Z0KH Arachis hypogaea HOM05D003009 ORTHO05D008148 3.8e-08 61.6 64 53.1
C03p79260 Brassica napus HOM05D007513 ORTHO05D008148 5.0e-08 61.2 87 33.3
BcaNung02064 Brassica carinata HOM05D014277 ORTHO05D008148 8.5e-08 60.5 82 39.0
RcHm_v2.0_Chr5g0053611 Rosa chinensis HOM05D015974 ORTHO05D008148 1.5e-07 59.7 57 54.4
arahy.Tifrunner.gnm1.ann1.N7EVBW Arachis hypogaea HOM05D007513 ORTHO05D008148 2.5e-07 58.9 44 61.4
arahy.Tifrunner.gnm1.ann1.NLBN4J Arachis hypogaea HOM05D007513 ORTHO05D008148 4.2e-07 58.2 73 45.2
TPR.G16351 Trifolium pratense HOM05D007513 ORTHO05D008148 4.2e-07 58.2 124 33.1
Rhsim01G0211300 Rhododendron simsii HOM05D007513 ORTHO05D008148 5.5e-07 57.8 54 55.6
SEGI_38697 Sequoiadendron giganteum HOM05D007513 ORTHO05D008148 5.5e-07 57.8 52 48.1
Sopen03g007910 Solanum pennellii HOM05D007513 ORTHO05D008148 1.6e-06 56.2 62 46.8
Lj6g0007185 Lotus japonicus HOM05D007513 ORTHO05D008148 6.1e-06 54.3 57 43.9

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (10 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (3 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (0 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (0 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (2 genes)
Salix brachista (0 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings