Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045118 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 0.0e+00 1169.5 604 100.0
Rhsim08G0200200 Rhododendron simsii HOM05D007228 ORTHO05D009099 7.4e-211 737.6 459 80.2
vmacro19097 Vaccinium macrocarpon HOM05D007228 ORTHO05D009099 7.4e-211 737.6 472 78.6
Dinv13695 Davidia involucrata HOM05D007228 ORTHO05D009099 1.9e-206 723.0 468 77.6
Actinidia18280 Actinidia chinensis HOM05D007228 ORTHO05D009099 3.7e-202 708.8 487 75.4
Hma1.2p1_0338F.1_g129520 Hydrangea macrophylla HOM05D007228 ORTHO05D009099 8.5e-199 697.6 468 75.2
Ciclev10030919m.g Citrus clementina HOM05D007228 ORTHO05D009099 3.0e-172 609.4 471 65.2
Atru.chr6.1953 Acer truncatum HOM05D007228 ORTHO05D009099 2.2e-170 603.2 471 65.2
Solyc03g117990.1 Solanum lycopersicum HOM05D007228 ORTHO05D009099 1.3e-167 594.0 469 63.1
Sopen03g036890 Solanum pennellii HOM05D007228 ORTHO05D009099 4.3e-166 589.0 469 63.1
Cpa.g.sc13.201 Carica papaya HOM05D007228 ORTHO05D009099 9.5e-166 587.8 471 63.7
GSVIVG01014990001 Vitis vinifera HOM05D007228 ORTHO05D009099 1.8e-164 583.6 471 62.8
Duzib205G0703 Durio zibethinus HOM05D007228 ORTHO05D009099 7.5e-163 578.2 476 62.6
Gohir.D12G197500 Gossypium hirsutum HOM05D007228 ORTHO05D009099 9.8e-163 577.8 471 61.4
Potri.015G109700 Populus trichocarpa HOM05D007228 ORTHO05D009099 4.9e-162 575.5 470 61.5
TAR629G1179 Trochodendron aralioides HOM05D007228 ORTHO05D009099 6.4e-162 575.1 460 65.4
Peaxi162Scf00314g00833 Petunia axillaris HOM05D007228 ORTHO05D009099 4.1e-161 572.4 469 62.9
TWI39G0517 Tripterygium wilfordii HOM05D007228 ORTHO05D009099 1.2e-160 570.9 471 61.4
PSO478G4831 Papaver somniferum HOM05D007228 ORTHO05D009099 3.1e-156 556.2 509 57.8
PSO017G4664 Papaver somniferum HOM05D007228 ORTHO05D009099 2.6e-155 553.1 508 57.7
Migut.D01167 Erythranthe guttata HOM05D007228 ORTHO05D009099 3.7e-154 549.3 475 59.8
Gohir.A12G195100 Gossypium hirsutum HOM05D007228 ORTHO05D009099 1.9e-153 547.0 451 60.5
Nitab4.5_0011883g0020 Nicotiana tabacum HOM05D007228 ORTHO05D009099 3.2e-153 546.2 469 60.8
Gorai.008G212000 Gossypium raimondii HOM05D007228 ORTHO05D009099 4.1e-153 545.8 450 60.7
Nitab4.5_0000976g0280 Nicotiana tabacum HOM05D007228 ORTHO05D009099 7.0e-153 545.0 460 60.4
Thecc.03G143400 Theobroma cacao HOM05D007228 ORTHO05D009099 7.0e-153 545.0 424 65.3
Cc04_g05590 Coffea canephora HOM05D007228 ORTHO05D009099 9.2e-153 544.7 473 59.4
Nn3g16198 Nelumbo nucifera HOM05D007228 ORTHO05D009099 9.2e-153 544.7 505 58.0
QL10p000149 Quercus lobata HOM05D007228 ORTHO05D009099 9.2e-153 544.7 473 59.2
Manes.06G128600 Manihot esculenta HOM05D007228 ORTHO05D009099 3.5e-152 542.7 503 56.7
HanXRQChr08g0229031 Helianthus annuus HOM05D007228 ORTHO05D009099 6.6e-151 538.5 491 56.8
Cfa018687 Carpinus fangiana HOM05D007228 ORTHO05D009099 3.3e-150 536.2 471 58.8
AT5G07380 Arabidopsis thaliana HOM05D007228 ORTHO05D009099 1.6e-149 533.9 494 54.7
CSS0001938 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 1.1e-148 531.2 262 100.0
AL6G17680 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 5.8e-147 525.4 498 54.4
Haze_07072 Corylus avellana HOM05D007228 ORTHO05D009099 2.9e-146 523.1 499 56.1
CARHR205770 Cardamine hirsuta HOM05D007228 ORTHO05D009099 1.4e-145 520.8 498 54.0
Aqoxy5G02968 Aquilegia oxysepala HOM05D007228 ORTHO05D009099 2.4e-145 520.0 474 57.8
COL.COLO4_37286 Corchorus olitorius HOM05D007228 ORTHO05D009099 7.8e-144 515.0 460 57.2
THA.LOC104819419 Tarenaya hassleriana HOM05D007228 ORTHO05D009099 1.7e-143 513.8 501 54.5
A10p29130 Brassica napus HOM05D007228 ORTHO05D009099 2.3e-143 513.5 473 55.2
Ca_16830_v3 Cicer arietinum L. HOM05D007228 ORTHO05D009099 2.3e-143 513.5 471 56.5
BraA10t44962Z Brassica rapa HOM05D007228 ORTHO05D009099 3.9e-143 512.7 473 55.0
Lj4g0027006 Lotus japonicus HOM05D007228 ORTHO05D009099 8.6e-143 511.5 471 56.3
C09p69520 Brassica napus HOM05D007228 ORTHO05D009099 1.1e-142 511.1 473 55.0
BolC9t59696H Brassica oleracea HOM05D007228 ORTHO05D009099 1.1e-142 511.1 473 55.0
Thhalv10012911m.g Eutrema salsugineum HOM05D007228 ORTHO05D009099 3.3e-142 509.6 472 55.7
Carub.0006s0635 Capsella rubella HOM05D007228 ORTHO05D009099 2.1e-141 506.9 471 54.6
MD06G1128600 Malus domestica HOM05D007228 ORTHO05D009099 8.1e-141 505.0 503 55.5
FAN18G1110 Fragaria x ananassa HOM05D007228 ORTHO05D009099 1.1e-140 504.6 470 55.5
Lsat_1_v5_gn_1_30460 Lactuca sativa HOM05D007228 ORTHO05D009099 1.8e-140 503.8 425 59.8
SGA_v2.0_scaffold515G52653 Striga asiatica HOM05D007228 ORTHO05D009099 1.8e-140 503.8 520 51.5
FvH4_5g10000 Fragaria vesca HOM05D007228 ORTHO05D009099 2.4e-140 503.4 473 55.2
FAN04G0692 Fragaria x ananassa HOM05D007228 ORTHO05D009099 2.4e-140 503.4 473 55.4
CAN.G1008.38 Capsicum annuum HOM05D007228 ORTHO05D009099 4.0e-140 502.7 475 56.8
SalBow1G3473 Salvia bowleyana HOM05D007228 ORTHO05D009099 4.4e-139 499.2 474 55.9
Glyma.08G006100 Glycine max HOM05D007228 ORTHO05D009099 4.9e-138 495.7 472 55.9
Medtr8g095540 Medicago truncatula HOM05D007228 ORTHO05D009099 6.4e-138 495.4 471 54.8
arahy.Tifrunner.gnm1.ann1.E4K3LT Arachis hypogaea HOM05D007228 ORTHO05D009099 7.1e-137 491.9 472 54.7
ECA247G3190 Erigeron canadensis HOM05D007228 ORTHO05D009099 7.1e-137 491.9 401 61.1
arahy.Tifrunner.gnm1.ann1.RK1GDQ Arachis hypogaea HOM05D007228 ORTHO05D009099 6.0e-136 488.8 472 54.2
BcaC06g32443 Brassica carinata HOM05D007228 ORTHO05D009099 7.8e-136 488.4 472 53.4
Sabra15G0131800 Salix brachista HOM05D007228 ORTHO05D009099 8.7e-135 485.0 455 55.4
FAN08G0661 Fragaria x ananassa HOM05D007228 ORTHO05D009099 6.2e-133 478.8 471 53.7
Manes.14G042701 Manihot esculenta HOM05D007228 ORTHO05D009099 1.4e-132 477.6 476 52.3
VMungo0251G0919 Vigna mungo HOM05D007228 ORTHO05D009099 9.0e-132 474.9 479 54.1
MBI11_g17279_MAGBIO Magnolia biondii HOM05D007228 ORTHO05D009099 4.3e-126 456.1 403 58.3
Phvul.002G279800 Phaseolus vulgaris HOM05D007228 ORTHO05D009099 2.1e-125 453.8 425 55.3
Psat7g040280 Pisum sativum HOM05D007228 ORTHO05D009099 1.8e-124 450.7 428 55.1
RcHm_v2.0_Chr7g0188261 Rosa chinensis HOM05D007228 ORTHO05D009099 1.7e-122 444.1 438 53.9
Sed0011749 Sechium edule HOM05D007228 ORTHO05D009099 8.7e-119 431.8 473 48.4
Lj9C489T6 Lonicera japonica HOM05D007228 ORTHO05D009099 2.5e-118 430.3 407 57.0
ClCG07G006120 Citrullus lanatus HOM05D007228 ORTHO05D009099 3.7e-117 426.4 473 49.5
Aa31LG3G18990 Aethionema arabicum HOM05D007228 ORTHO05D009099 3.1e-116 423.3 498 47.4
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 7.6e-115 418.7 461 50.5
Os01g0103900 Oryza sativa ssp. japonica HOM05D007228 ORTHO05D009099 3.2e-113 413.3 470 49.8
EL10Ac5g11261 Beta vulgaris HOM05D007228 ORTHO05D009099 5.5e-113 412.5 477 50.1
Prupe.5G138400 Prunus persica HOM05D007228 ORTHO05D009099 8.7e-111 405.2 340 61.5
Zm00001eb334150 Zea mays HOM05D007228 ORTHO05D009099 5.6e-110 402.5 482 47.1
PGR142G1350 Punica granatum HOM05D007228 ORTHO05D009099 7.1e-105 385.6 532 42.7
CsaV3_5G013390 Cucumis sativus L. HOM05D007228 ORTHO05D009099 9.3e-105 385.2 512 43.8
Eucgr.E04338 Eucalyptus grandis HOM05D007228 ORTHO05D009099 1.8e-103 380.9 475 46.9
MELO3C018355.2 Cucumis melo HOM05D007228 ORTHO05D009099 3.3e-102 376.7 406 48.8
TPR.G12794 Trifolium pratense HOM05D007228 ORTHO05D009099 3.9e-95 353.2 350 52.9
AUR62036968 Chenopodium quinoa HOM05D007228 ORTHO05D009099 2.5e-89 334.0 483 44.3
Hund02521 Selenicereus undatus HOM05D007228 ORTHO05D009099 2.2e-82 310.8 728 35.7
Ah.02g114480 Amaranthus hybridus HOM05D003541 ORTHO05D004095 3.8e-82 310.1 498 41.4
SEGI_11491 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 7.2e-81 305.8 418 42.8
AUR62032199 Chenopodium quinoa HOM05D007228 ORTHO05D009099 2.0e-75 287.7 466 41.4
Sc04g0000080 Simmondsia chinensis HOM05D007228 ORTHO05D009099 6.5e-74 282.7 352 45.5
Sc04g0000120 Simmondsia chinensis HOM05D007228 ORTHO05D009099 6.5e-74 282.7 352 45.5
GSVIVG01035283001 Vitis vinifera HOM05D007228 ORTHO05D009099 1.5e-70 271.6 265 55.1
Lalb_Chr12g0202641 Lupinus albus HOM05D007228 ORTHO05D009099 1.7e-69 268.1 262 53.8
PGSC0003DMG400014227 Solanum tuberosum HOM05D007228 ORTHO05D009099 1.0e-58 232.3 186 62.9
SMO119G0281 Selaginella moellendorffii HOM05D007228 ORTHO05D009099 1.6e-56 224.9 480 32.5
unitig_747.g21316 Utricularia gibba HOM05D002839 ORTHO05D003349 6.1e-56 223.0 263 47.9
Lalb_Chr12g0202651 Lupinus albus HOM05D007228 ORTHO05D009099 1.5e-49 201.8 195 53.8
Psat0s3642g0120 Pisum sativum HOM05D007228 ORTHO05D009099 8.3e-45 186.0 242 46.3
Medtr4g061370 Medicago truncatula HOM05D000876 ORTHO05D000285 5.6e-41 173.3 167 52.1
HPP92_021579 Vanilla planifolia HOM05D007228 ORTHO05D009099 2.2e-37 161.4 194 49.0
TPR.G21492 Trifolium pratense HOM05D007228 ORTHO05D009099 1.6e-35 155.2 201 45.3
Psat3g128520 Pisum sativum HOM05D007228 ORTHO05D009099 8.1e-32 142.9 241 39.0
Psat0s5010g0080 Pisum sativum HOM05D005021 ORTHO05D006824 1.2e-27 129.0 106 56.6
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 4.6e-27 127.1 162 44.4
AUR62009120 Chenopodium quinoa HOM05D007228 ORTHO05D009099 6.0e-27 126.7 478 26.8
AagrBONN_evm.TU.Sc2ySwM_344.3780 Anthoceros agrestis HOM05D007228 ORTHO05D009099 6.6e-26 123.2 200 35.5
HPP92_021580 Vanilla planifolia HOM05D007228 ORTHO05D009099 6.8e-23 113.2 167 38.9
CDE06G2808 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 8.4e-21 106.3 114 46.5
AL468U10020 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 1.8e-15 88.6 84 53.6
CDE02G0692 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 6.4e-13 80.1 96 45.8
Peaxi162Scf00677g00035 Petunia axillaris HOM05D000800 ORTHO05D000658 2.6e-06 58.2 121 37.2

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (0 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (5 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (2 genes)
Zea mays (1 genes)

Program Settings