Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045011 Camellia sinensis var. sinensis HOM05D002499 ORTHO05D111361 2.0e-91 339.0 159 100.0
CSS0033326 Camellia sinensis var. sinensis HOM05D002499 ORTHO05D109341 1.0e-58 230.3 167 69.5
CSS0046167 Camellia sinensis var. sinensis HOM05D002499 ORTHO05D002812 3.6e-16 89.0 77 59.7
Actinidia08951 Actinidia chinensis HOM05D002499 ORTHO05D002812 2.6e-14 82.8 77 53.2
CSS0036691 Camellia sinensis var. sinensis HOM05D002499 ORTHO05D002812 5.8e-14 81.6 77 54.5
Dinv23317 Davidia involucrata HOM05D002499 ORTHO05D002812 7.6e-14 81.3 77 54.5
GSVIVG01013625001 Vitis vinifera HOM05D002499 ORTHO05D002812 2.2e-13 79.7 77 53.2
TAR625G0939 Trochodendron aralioides HOM05D002499 ORTHO05D002812 7.1e-12 74.7 77 51.9
Nitab4.5_0003335g0050 Nicotiana tabacum HOM05D002499 ORTHO05D002812 1.6e-11 73.6 77 49.4
Rhsim12G0188800 Rhododendron simsii HOM05D001993 ORTHO05D009037 1.6e-11 73.6 53 67.9
vmacro16869 Vaccinium macrocarpon HOM05D002499 ORTHO05D002812 2.7e-11 72.8 45 77.8
vmacro17297 Vaccinium macrocarpon HOM05D002499 ORTHO05D002812 2.7e-11 72.8 45 77.8
Aqoxy3G01317 Aquilegia oxysepala HOM05D002499 ORTHO05D002812 4.6e-11 72.0 77 50.6
Lalb_Chr22g0350771 Lupinus albus HOM05D002499 ORTHO05D002812 6.0e-11 71.6 77 51.9
Nitab4.5_0004227g0050 Nicotiana tabacum HOM05D002499 ORTHO05D002812 6.0e-11 71.6 77 48.1
CDE02G4653 Ceratophyllum demersum HOM05D002499 ORTHO05D002812 7.9e-11 71.2 77 48.1
AUR62016599 Chenopodium quinoa HOM05D002499 ORTHO05D002812 7.9e-11 71.2 77 48.1
Lalb_Chr14g0373931 Lupinus albus HOM05D002499 ORTHO05D002812 1.0e-10 70.9 77 51.9
HPP92_005343 Vanilla planifolia HOM05D002499 ORTHO05D002812 1.0e-10 70.9 77 48.1
EL10Ac2g03135 Beta vulgaris HOM05D002499 ORTHO05D002812 1.3e-10 70.5 77 48.1
QL05p033830 Quercus lobata HOM05D002499 ORTHO05D002812 1.7e-10 70.1 53 64.2
Peaxi162Scf00023g01330 Petunia axillaris HOM05D002499 ORTHO05D002812 2.3e-10 69.7 77 46.8
vmacro17298 Vaccinium macrocarpon HOM05D002499 ORTHO05D002812 2.3e-10 69.7 56 62.5
DCAR_021361 Daucus carota HOM05D002499 ORTHO05D002812 3.0e-10 69.3 76 47.4
Lj9C496G12 Lonicera japonica HOM05D002499 ORTHO05D002812 3.0e-10 69.3 77 50.6
Hund06540 Selenicereus undatus HOM05D002499 ORTHO05D002812 5.1e-10 68.6 53 62.3
Haze_16626 Corylus avellana HOM05D002499 ORTHO05D002812 6.6e-10 68.2 53 64.2
Haze_16629 Corylus avellana HOM05D002499 ORTHO05D002812 6.6e-10 68.2 53 64.2
arahy.Tifrunner.gnm1.ann1.K5UKEJ Arachis hypogaea HOM05D002499 ORTHO05D002812 8.7e-10 67.8 75 50.7
CAN.G438.90 Capsicum annuum HOM05D002499 ORTHO05D002812 8.7e-10 67.8 77 45.5
Cpa.g.sc10.127 Carica papaya HOM05D002499 ORTHO05D002812 8.7e-10 67.8 77 49.4
Atru.chr1.1502 Acer truncatum HOM05D002499 ORTHO05D002812 1.1e-09 67.4 53 62.3
Solyc03g120000.3 Solanum lycopersicum HOM05D002499 ORTHO05D002812 1.1e-09 67.4 77 46.8
Sopen03g038880 Solanum pennellii HOM05D002499 ORTHO05D002812 1.1e-09 67.4 77 46.8
PGSC0003DMG400005610 Solanum tuberosum HOM05D002499 ORTHO05D002812 1.1e-09 67.4 77 46.8
Thecc.06G035800 Theobroma cacao HOM05D002499 ORTHO05D002812 1.1e-09 67.4 53 62.3
Phvul.005G181500 Phaseolus vulgaris HOM05D002499 ORTHO05D002812 1.5e-09 67.0 53 66.0
Psat5g304000 Pisum sativum HOM05D002499 ORTHO05D002812 1.5e-09 67.0 44 70.5
Sc12g0008570 Simmondsia chinensis HOM05D002499 ORTHO05D002812 1.5e-09 67.0 77 46.8
Sc12g0009010 Simmondsia chinensis HOM05D002499 ORTHO05D002812 1.5e-09 67.0 77 46.8
Manes.04G106600 Manihot esculenta HOM05D002499 ORTHO05D002812 1.9e-09 66.6 53 60.4
TPR.G29606 Trifolium pratense HOM05D002499 ORTHO05D002812 1.9e-09 66.6 44 70.5
arahy.Tifrunner.gnm1.ann1.50IW82 Arachis hypogaea HOM05D002499 ORTHO05D002812 2.5e-09 66.2 53 64.2
arahy.Tifrunner.gnm1.ann1.PLPE7Z Arachis hypogaea HOM05D002499 ORTHO05D002812 2.5e-09 66.2 53 64.2
Cfa001916 Carpinus fangiana HOM05D002499 ORTHO05D002812 2.5e-09 66.2 53 62.3
Gohir.D05G122300 Gossypium hirsutum HOM05D002499 ORTHO05D002812 2.5e-09 66.2 45 68.9
Gorai.009G125800 Gossypium raimondii HOM05D002499 ORTHO05D002812 2.5e-09 66.2 45 68.9
Glyma.15G005300 Glycine max HOM05D002499 ORTHO05D002812 3.3e-09 65.9 53 62.3
Gohir.A05G121300 Gossypium hirsutum HOM05D002499 ORTHO05D002812 3.3e-09 65.9 45 66.7
Duzib235G1396 Durio zibethinus HOM05D002499 ORTHO05D002812 4.3e-09 65.5 51 62.7
Nn2g12223 Nelumbo nucifera HOM05D002499 ORTHO05D002812 4.3e-09 65.5 77 48.1
VMungo1080G0657 Vigna mungo HOM05D002499 ORTHO05D002812 4.3e-09 65.5 53 64.2
Ca_01032_v3 Cicer arietinum L. HOM05D002499 ORTHO05D002812 7.3e-09 64.7 42 71.4
Cc11_g03280 Coffea canephora HOM05D002499 ORTHO05D002812 7.3e-09 64.7 77 42.9
Lj3g0010501 Lotus japonicus HOM05D002499 ORTHO05D002812 7.3e-09 64.7 53 62.3
Potri.005G110500 Populus trichocarpa HOM05D002499 ORTHO05D002812 7.3e-09 64.7 53 62.3
arahy.Tifrunner.gnm1.ann1.K6DZ42 Arachis hypogaea HOM05D002499 ORTHO05D002812 9.6e-09 64.3 53 62.3
COL.COLO4_25125 Corchorus olitorius HOM05D002499 ORTHO05D002812 9.6e-09 64.3 47 61.7
MELO3C023451.2 Cucumis melo HOM05D002499 ORTHO05D002812 9.6e-09 64.3 77 48.1
CsaV3_7G032060 Cucumis sativus L. HOM05D002499 ORTHO05D002812 9.6e-09 64.3 77 48.1
ClCG09G003160 Citrullus lanatus HOM05D002499 ORTHO05D002812 1.3e-08 63.9 45 68.9
ATR0800G174 Amborella trichopoda HOM05D002499 ORTHO05D002812 2.1e-08 63.2 77 46.8
Eucgr.F02255 Eucalyptus grandis HOM05D002499 ORTHO05D002812 3.6e-08 62.4 45 64.4
SGA_v2.0_scaffold117G32333 Striga asiatica HOM05D002499 ORTHO05D002812 3.6e-08 62.4 79 41.8
arahy.Tifrunner.gnm1.ann1.PQEG92 Arachis hypogaea HOM05D002499 ORTHO05D002812 4.8e-08 62.0 55 60.0
Ciclev10025428m.g Citrus clementina HOM05D002499 ORTHO05D002812 4.8e-08 62.0 45 64.4
HanXRQChr05g0140801 Helianthus annuus HOM05D002499 ORTHO05D002812 4.8e-08 62.0 77 46.8
Lsat_1_v5_gn_5_7901 Lactuca sativa HOM05D002499 ORTHO05D002812 4.8e-08 62.0 77 46.8
Sed0027441 Sechium edule HOM05D002499 ORTHO05D002812 6.2e-08 61.6 45 66.7
SEGI_24500 Sequoiadendron giganteum HOM05D002499 ORTHO05D002812 6.2e-08 61.6 77 44.2
FAN09G4839 Fragaria x ananassa HOM05D002499 ORTHO05D002812 8.1e-08 61.2 77 45.5
RcHm_v2.0_Chr2g0133711 Rosa chinensis HOM05D002499 ORTHO05D002812 8.1e-08 61.2 77 45.5
ATR0767G236 Amborella trichopoda HOM05D002499 ORTHO05D002812 1.1e-07 60.8 77 46.8
CiPaw.01G251600 Carya illinoinensis HOM05D002499 ORTHO05D002812 1.4e-07 60.5 53 60.4
FvH4_6g29040 Fragaria vesca HOM05D002499 ORTHO05D002812 2.4e-07 59.7 77 45.5
FAN14G1678 Fragaria x ananassa HOM05D002499 ORTHO05D002812 2.4e-07 59.7 77 45.5
Sabra05G0090600 Salix brachista HOM05D002499 ORTHO05D002812 3.1e-07 59.3 53 58.5
Atru.chr7.1114 Acer truncatum HOM05D002499 ORTHO05D002812 5.3e-07 58.5 77 41.6
PSO017G4237 Papaver somniferum HOM05D002499 ORTHO05D002812 9.0e-07 57.8 81 44.4
PSO170G6815 Papaver somniferum HOM05D002499 ORTHO05D002812 9.0e-07 57.8 81 44.4
Ciclev10008137m.g Citrus clementina HOM05D002499 ORTHO05D002812 1.2e-06 57.4 77 41.6
ECA246G0812 Erigeron canadensis HOM05D002499 ORTHO05D002812 1.2e-06 57.4 77 44.2
Migut.D01091 Erythranthe guttata HOM05D002499 ORTHO05D002812 1.5e-06 57.0 45 60.0
Medtr2g104600 Medicago truncatula HOM05D002499 ORTHO05D002812 1.5e-06 57.0 40 72.5
Potri.007G063900 Populus trichocarpa HOM05D002499 ORTHO05D002812 2.0e-06 56.6 77 46.8
CANSAT11G0323 Cannabis sativa HOM05D002499 ORTHO05D002812 2.6e-06 56.2 77 41.6
Eucgr.C01353 Eucalyptus grandis HOM05D002499 ORTHO05D002812 2.6e-06 56.2 77 39.0
Eucgr.C01440 Eucalyptus grandis HOM05D002499 ORTHO05D002812 2.6e-06 56.2 77 39.0
AT2G26000 Arabidopsis thaliana HOM05D002499 ORTHO05D002812 3.4e-06 55.8 45 62.2
BcaB05g25257 Brassica carinata HOM05D002499 ORTHO05D002812 3.4e-06 55.8 45 62.2
BcaC03g15952 Brassica carinata HOM05D002499 ORTHO05D002812 3.4e-06 55.8 45 62.2
A02p23440 Brassica napus HOM05D002499 ORTHO05D009037 3.4e-06 55.8 45 62.2
C02p37140 Brassica napus HOM05D002499 ORTHO05D002812 3.4e-06 55.8 45 62.2
BolC2t09726H Brassica oleracea HOM05D001993 ORTHO05D009037 3.4e-06 55.8 45 62.2
BraA02t07336Z Brassica rapa HOM05D002499 ORTHO05D002812 3.4e-06 55.8 45 62.2
Carub.0002s2698 Capsella rubella HOM05D002499 ORTHO05D002812 3.4e-06 55.8 45 62.2
Eucgr.C01348 Eucalyptus grandis HOM05D002499 ORTHO05D002812 3.4e-06 55.8 77 39.0
Eucgr.C01400 Eucalyptus grandis HOM05D002499 ORTHO05D002812 3.4e-06 55.8 77 39.0
Eucgr.C01410 Eucalyptus grandis HOM05D002499 ORTHO05D002812 3.4e-06 55.8 77 39.0
Thhalv10018494m.g Eutrema salsugineum HOM05D002499 ORTHO05D002812 3.4e-06 55.8 45 62.2
Sp5g35210 Schrenkiella parvula HOM05D002499 ORTHO05D002812 3.4e-06 55.8 45 62.2
CiPaw.04G173800 Carya illinoinensis HOM05D002499 ORTHO05D002812 4.5e-06 55.5 77 39.0
Eucgr.C01428 Eucalyptus grandis HOM05D002499 ORTHO05D002812 4.5e-06 55.5 77 37.7
MBI11_g31278_MAGBIO Magnolia biondii HOM05D002499 ORTHO05D002812 5.8e-06 55.1 77 41.6
Prupe.3G094400 Prunus persica HOM05D002499 ORTHO05D002812 5.8e-06 55.1 78 46.2
SHI13319 Sapria himalayana HOM05D002499 ORTHO05D002812 5.8e-06 55.1 77 42.9
Sed0022185 Sechium edule HOM05D002499 ORTHO05D002812 7.6e-06 54.7 77 37.7
THA.LOC104812453 Tarenaya hassleriana HOM05D002499 ORTHO05D002812 7.6e-06 54.7 45 62.2
CARHR125340 Cardamine hirsuta HOM05D002499 ORTHO05D002812 9.9e-06 54.3 45 62.2
Eucgr.C01425 Eucalyptus grandis HOM05D002499 ORTHO05D002812 9.9e-06 54.3 55 47.3
Oeu005939.1 Olea europaea HOM05D002499 ORTHO05D002812 9.9e-06 54.3 46 56.5
TWI12G0474 Tripterygium wilfordii HOM05D002499 ORTHO05D002812 9.9e-06 54.3 45 60.0

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (2 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (5 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (2 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (8 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (2 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (0 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (0 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (3 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings