Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041532 Camellia sinensis var. sinensis HOM05D005061 ORTHO05D006001 6.5e-73 277.7 188 100.0
CSS0044809 Camellia sinensis var. sinensis HOM05D005061 ORTHO05D006001 6.5e-73 277.7 188 100.0
CSS0003459 Camellia sinensis var. sinensis HOM05D005061 ORTHO05D006001 6.2e-39 164.9 182 58.2
Lj8A15T45 Lonicera japonica HOM05D005061 ORTHO05D006001 6.2e-23 111.7 183 41.0
ECA247G1905 Erigeron canadensis HOM05D005061 ORTHO05D006001 2.0e-21 106.7 173 42.8
Dinv38211 Davidia involucrata HOM05D005061 ORTHO05D006001 2.6e-21 106.3 179 41.3
Hma1.2p1_0383F.1_g140630 Hydrangea macrophylla HOM05D005061 ORTHO05D006001 4.9e-20 102.1 190 39.5
TAR624G0493 Trochodendron aralioides HOM05D002455 ORTHO05D006001 4.2e-19 99.0 171 38.6
HanXRQChr13g0420931 Helianthus annuus HOM05D005061 ORTHO05D006001 1.6e-18 97.1 109 57.8
PGR042G2541 Punica granatum HOM05D005061 ORTHO05D006001 2.1e-18 96.7 183 38.8
Duzib212G0867 Durio zibethinus HOM05D005061 ORTHO05D006001 6.0e-18 95.1 182 40.7
TAR636G2803 Trochodendron aralioides HOM05D005061 ORTHO05D006001 1.3e-17 94.0 191 35.6
Psat6g003280 Pisum sativum HOM05D005061 ORTHO05D006001 2.3e-17 93.2 103 52.4
Solyc05g053730.3 Solanum lycopersicum HOM05D005061 ORTHO05D006001 2.3e-17 93.2 181 39.2
TPR.G26387 Trifolium pratense HOM05D005061 ORTHO05D006001 3.9e-17 92.4 109 49.5
Sopen05g032210 Solanum pennellii HOM05D005061 ORTHO05D006001 6.6e-17 91.7 181 38.7
Lalb_Chr01g0000091 Lupinus albus HOM05D005061 ORTHO05D006001 8.7e-17 91.3 108 48.1
Thecc.04G199600 Theobroma cacao HOM05D005061 ORTHO05D006001 8.7e-17 91.3 182 48.4
COL.COLO4_20183 Corchorus olitorius HOM05D005061 ORTHO05D006001 1.5e-16 90.5 169 37.9
PGSC0003DMG400015756 Solanum tuberosum HOM05D005061 ORTHO05D006001 1.5e-16 90.5 114 52.6
TPR.G1371 Trifolium pratense HOM05D005061 ORTHO05D006001 5.6e-16 88.6 101 51.5
Gohir.D10G140500 Gossypium hirsutum HOM05D005061 ORTHO05D006001 7.3e-16 88.2 159 39.0
Gorai.011G156100 Gossypium raimondii HOM05D005061 ORTHO05D006001 7.3e-16 88.2 159 39.0
Lj1g0014719 Lotus japonicus HOM05D005061 ORTHO05D006001 9.6e-16 87.8 163 38.0
Lj1g0023949 Lotus japonicus HOM05D005061 ORTHO05D006001 9.6e-16 87.8 163 38.0
Cc03_g08040 Coffea canephora HOM05D005061 ORTHO05D006001 1.6e-15 87.0 187 34.8
Lsat_1_v5_gn_2_46320 Lactuca sativa HOM05D005061 ORTHO05D006001 3.6e-15 85.9 88 59.1
Migut.G00717 Erythranthe guttata HOM05D005061 ORTHO05D006001 6.2e-15 85.1 183 36.1
SGA_v2.0_scaffold128G34119 Striga asiatica HOM05D005061 ORTHO05D006001 1.1e-14 84.3 172 34.9
SGA_v2.0_scaffold90G27899 Striga asiatica HOM05D005061 ORTHO05D006001 1.8e-14 83.6 174 35.1
Manes.10G081400 Manihot esculenta HOM05D005061 ORTHO05D006001 2.4e-14 83.2 150 35.3
Glyma.08G364400 Glycine max HOM05D005061 ORTHO05D006001 4.0e-14 82.4 107 48.6
Prupe.1G159300 Prunus persica HOM05D005061 ORTHO05D006001 4.0e-14 82.4 183 37.7
Glyma.18G297700 Glycine max HOM05D005061 ORTHO05D006001 5.3e-14 82.0 157 35.0
Manes.02G208300 Manihot esculenta HOM05D005061 ORTHO05D006001 5.3e-14 82.0 150 34.7
Phvul.008G004900 Phaseolus vulgaris HOM05D005061 ORTHO05D006001 5.3e-14 82.0 71 64.8
Cpa.g.sc170.49 Carica papaya HOM05D005061 ORTHO05D006001 1.2e-13 80.9 177 34.5
CDE07G0811 Ceratophyllum demersum HOM05D005061 ORTHO05D006001 2.6e-13 79.7 154 36.4
Gohir.A10G126200 Gossypium hirsutum HOM05D005061 ORTHO05D006001 2.6e-13 79.7 101 49.5
VMungo1383G0426 Vigna mungo HOM05D005061 ORTHO05D006001 2.6e-13 79.7 71 63.4
Rhsim02G0060400 Rhododendron simsii HOM05D005061 ORTHO05D006001 3.4e-13 79.3 119 48.7
EL10Ac9g22415 Beta vulgaris HOM05D005061 ORTHO05D006001 5.8e-13 78.6 159 40.9
Lsat_1_v5_gn_6_60821 Lactuca sativa HOM05D005061 ORTHO05D006001 5.8e-13 78.6 95 55.8
Nitab4.5_0003502g0080 Nicotiana tabacum HOM05D005061 ORTHO05D006001 9.9e-13 77.8 94 56.4
CDE04G1543 Ceratophyllum demersum HOM05D005061 ORTHO05D006001 1.7e-12 77.0 170 34.7
PSO541G4502 Papaver somniferum HOM05D005061 ORTHO05D006001 1.7e-12 77.0 81 53.1
PSO675G5536 Papaver somniferum HOM05D005061 ORTHO05D006001 1.7e-12 77.0 81 53.1
Ciclev10005973m.g Citrus clementina HOM05D005061 ORTHO05D006001 4.9e-12 75.5 75 57.3
MD12G1086100 Malus domestica HOM05D005061 ORTHO05D006001 8.4e-12 74.7 179 36.9
Nitab4.5_0002260g0170 Nicotiana tabacum HOM05D005061 ORTHO05D006001 8.4e-12 74.7 94 55.3
EL10Ac9g22416 Beta vulgaris HOM05D005061 ORTHO05D006001 1.1e-11 74.3 149 40.9
SalBow8G4870 Salvia bowleyana HOM05D005061 ORTHO05D006001 1.1e-11 74.3 115 40.9
Migut.N00403 Erythranthe guttata HOM05D005061 ORTHO05D006001 1.9e-11 73.6 181 33.7
Cpa.g.sc150.53 Carica papaya HOM05D005061 ORTHO05D006001 3.2e-11 72.8 160 33.1
MD14G1080700 Malus domestica HOM05D005061 ORTHO05D006001 3.2e-11 72.8 183 35.5
Sed0002608 Sechium edule HOM05D005061 ORTHO05D006001 4.2e-11 72.4 86 51.2
MSTRG.9809 Avicennia marina HOM05D005061 ORTHO05D006001 5.4e-11 72.0 185 35.7
Medtr1g025570 Medicago truncatula HOM05D005061 ORTHO05D006001 5.4e-11 72.0 100 47.0
unitig_26.g9510 Utricularia gibba HOM05D005061 ORTHO05D006001 5.4e-11 72.0 156 35.3
Psat3g206160 Pisum sativum HOM05D005061 ORTHO05D006001 7.1e-11 71.6 101 55.4
Ah.09g228330 Amaranthus hybridus HOM05D005061 ORTHO05D006001 9.3e-11 71.2 119 42.9
Thhalv10004918m.g Eutrema salsugineum HOM05D005061 ORTHO05D006001 9.3e-11 71.2 107 41.1
Sc19g0007290 Simmondsia chinensis HOM05D005061 ORTHO05D006001 2.1e-10 70.1 98 46.9
arahy.Tifrunner.gnm1.ann1.B38FIW Arachis hypogaea HOM05D005061 ORTHO05D006001 2.7e-10 69.7 54 66.7
arahy.Tifrunner.gnm1.ann1.V03Z72 Arachis hypogaea HOM05D005061 ORTHO05D006001 2.7e-10 69.7 54 66.7
BcaNung02589 Brassica carinata HOM05D005061 ORTHO05D006001 2.7e-10 69.7 111 39.6
C07p39760 Brassica napus HOM05D005061 ORTHO05D006001 2.7e-10 69.7 111 39.6
Oeu025020.1 Olea europaea HOM05D005061 ORTHO05D006001 2.7e-10 69.7 120 46.7
AL8G22790 Arabidopsis lyrata HOM05D005061 ORTHO05D006001 3.5e-10 69.3 108 40.7
Dinv27216 Davidia involucrata HOM05D005061 ORTHO05D006001 3.5e-10 69.3 80 53.8
Hund18997 Selenicereus undatus HOM05D005061 ORTHO05D006001 3.5e-10 69.3 87 49.4
Peaxi162Scf00423g00316 Petunia axillaris HOM05D005061 ORTHO05D006001 6.0e-10 68.6 73 52.1
BraA06t26765Z Brassica rapa HOM05D005061 ORTHO05D006001 7.9e-10 68.2 111 38.7
vmacro15554 Vaccinium macrocarpon HOM05D005061 ORTHO05D006001 7.9e-10 68.2 75 54.7
AT5G49210 Arabidopsis thaliana HOM05D005061 ORTHO05D006001 1.0e-09 67.8 165 30.3
Actinidia23412 Actinidia chinensis HOM05D005061 ORTHO05D006001 1.3e-09 67.4 76 59.2
A06p38500 Brassica napus HOM05D005061 ORTHO05D006001 1.3e-09 67.4 111 37.8
CAN.G765.25 Capsicum annuum HOM05D005061 ORTHO05D006001 1.3e-09 67.4 176 33.5
BcaC06g30707 Brassica carinata HOM05D005061 ORTHO05D006001 1.8e-09 67.0 110 37.3
Atru.chr4.1296 Acer truncatum HOM05D005061 ORTHO05D006001 3.0e-09 66.2 76 50.0
Carub.0008s0903 Capsella rubella HOM05D005061 ORTHO05D006001 3.0e-09 66.2 100 39.0
AUR62006500 Chenopodium quinoa HOM05D005061 ORTHO05D006001 3.0e-09 66.2 99 54.5
CARHR182460 Cardamine hirsuta HOM05D005061 ORTHO05D006001 3.9e-09 65.9 97 40.2
HPP92_021062 Vanilla planifolia HOM05D005061 ORTHO05D006001 3.9e-09 65.9 114 36.8
BolC7t44502H Brassica oleracea HOM05D005061 ORTHO05D006001 5.1e-09 65.5 111 38.7
FAN17G0047 Fragaria x ananassa HOM05D005061 ORTHO05D006001 5.1e-09 65.5 160 33.1
Atru.chr4.1292 Acer truncatum HOM05D005061 ORTHO05D006001 8.7e-09 64.7 103 39.8
THA.LOC104808705 Tarenaya hassleriana HOM05D005061 ORTHO05D006001 8.7e-09 64.7 63 52.4
Ca_04063_v3 Cicer arietinum L. HOM05D005061 ORTHO05D006001 1.1e-08 64.3 103 46.6
Ca_04069_v3 Cicer arietinum L. HOM05D005061 ORTHO05D006001 1.1e-08 64.3 103 46.6
BcaC03g17706 Brassica carinata HOM05D005061 ORTHO05D006001 1.5e-08 63.9 98 40.8
C02p57130 Brassica napus HOM05D005061 ORTHO05D006001 1.5e-08 63.9 98 40.8
GSVIVG01020921001 Vitis vinifera HOM05D005061 ORTHO05D006001 1.5e-08 63.9 89 48.3
CsaV3_3G010880 Cucumis sativus L. HOM05D005061 ORTHO05D006001 1.9e-08 63.5 70 54.3
Cfa014943 Carpinus fangiana HOM05D005061 ORTHO05D006001 3.3e-08 62.8 76 51.3
TWI34G0245 Tripterygium wilfordii HOM05D005061 ORTHO05D006001 3.3e-08 62.8 114 43.0
Sp2g19580 Schrenkiella parvula HOM05D005061 ORTHO05D006001 4.3e-08 62.4 107 37.4
FAN22G0582 Fragaria x ananassa HOM05D005061 ORTHO05D006001 5.6e-08 62.0 163 32.5
TWI34G1372 Tripterygium wilfordii HOM05D005061 ORTHO05D006001 5.6e-08 62.0 114 43.9
BcaB04g19598 Brassica carinata HOM05D005061 ORTHO05D006001 7.4e-08 61.6 96 39.6
arahy.Tifrunner.gnm1.ann1.16QZ2B Arachis hypogaea HOM05D001164 ORTHO05D026902 9.6e-08 61.2 61 57.4
CANSAT78G0571 Cannabis sativa HOM05D005061 ORTHO05D006001 9.6e-08 61.2 183 30.6
FvH4_4g13570 Fragaria vesca HOM05D005061 ORTHO05D006001 9.6e-08 61.2 163 32.5
Haze_11630 Corylus avellana HOM05D005061 ORTHO05D006001 1.3e-07 60.8 91 46.2
FAN07G0218 Fragaria x ananassa HOM05D005061 ORTHO05D006001 1.6e-07 60.5 163 31.9
Os11g0148600 Oryza sativa ssp. japonica HOM05D005061 ORTHO05D006001 2.1e-07 60.1 101 35.6
RcHm_v2.0_Chr4g0414321 Rosa chinensis HOM05D005061 ORTHO05D006001 2.1e-07 60.1 172 33.1
AUR62025033 Chenopodium quinoa HOM05D005061 ORTHO05D006001 1.4e-06 57.4 82 43.9
BraA02t08777Z Brassica rapa HOM05D005061 ORTHO05D006001 1.8e-06 57.0 98 38.8
Eucgr.G02600 Eucalyptus grandis HOM05D005061 ORTHO05D006001 1.8e-06 57.0 74 48.6
BcaB07g34140 Brassica carinata HOM05D005061 ORTHO05D006001 2.4e-06 56.6 92 37.0
Zm00001eb092840 Zea mays HOM05D005061 ORTHO05D006001 2.4e-06 56.6 99 35.4
Potri.001G317300 Populus trichocarpa HOM05D005061 ORTHO05D006001 3.1e-06 56.2 70 47.1
Aa31LG11G8230 Aethionema arabicum HOM05D005061 ORTHO05D006001 4.0e-06 55.8 113 35.4
MSTRG.4232 Avicennia marina HOM05D005061 ORTHO05D006001 4.0e-06 55.8 89 42.7
CiPaw.01G118900 Carya illinoinensis HOM05D005061 ORTHO05D006001 4.0e-06 55.8 77 49.4
arahy.Tifrunner.gnm1.ann1.FDW9Z4 Arachis hypogaea HOM05D005061 ORTHO05D006001 5.3e-06 55.5 55 56.4
Lj3P401T12 Lonicera japonica HOM05D005061 ORTHO05D006001 5.3e-06 55.5 34 67.6
Medtr7g407030 Medicago truncatula HOM05D005061 ORTHO05D006001 5.3e-06 55.5 101 39.6
Sabra16G0200700 Salix brachista HOM05D005061 ORTHO05D006001 5.3e-06 55.5 70 47.1

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (2 genes)
Beta vulgaris (2 genes)
Brassica carinata (5 genes)
Brassica napus (3 genes)
Brassica oleracea (1 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (0 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (2 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (0 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings