Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001849 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 1.0e-52 209.9 114 100.0
CSS0044569 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 1.0e-52 209.9 114 100.0
Actinidia35721 Actinidia chinensis HOM05D006010 ORTHO05D007381 1.9e-38 162.5 112 81.2
Rhsim10G0180400 Rhododendron simsii HOM05D006010 ORTHO05D007381 7.8e-37 157.1 99 82.8
Actinidia28796 Actinidia chinensis HOM05D006010 ORTHO05D007381 1.0e-36 156.8 112 80.4
CiPaw.03G074500 Carya illinoinensis HOM05D006010 ORTHO05D007381 1.2e-32 143.3 110 69.1
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 2.2e-31 139.0 109 68.8
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 4.1e-30 134.8 112 69.6
Lj2A517G40 Lonicera japonica HOM05D006010 ORTHO05D007381 1.6e-29 132.9 101 73.3
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 2.1e-29 132.5 108 69.4
GSVIVG01015998001 Vitis vinifera HOM05D006010 ORTHO05D007381 2.1e-29 132.5 103 70.9
Prupe.2G048000 Prunus persica HOM05D006010 ORTHO05D007381 2.7e-29 132.1 110 66.4
VMungo0464G0699 Vigna mungo HOM05D006010 ORTHO05D007381 3.5e-29 131.7 110 64.5
MD02G1273300 Malus domestica HOM05D006010 ORTHO05D007381 1.0e-28 130.2 110 66.4
RcHm_v2.0_Chr3g0492111 Rosa chinensis HOM05D006010 ORTHO05D007381 1.0e-28 130.2 110 65.5
TWI53G0527 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 1.0e-28 130.2 110 65.5
GSVIVG01016005001 Vitis vinifera HOM05D006010 ORTHO05D007381 1.3e-28 129.8 108 68.5
PGR004G1862 Punica granatum HOM05D006010 ORTHO05D007381 2.3e-28 129.0 107 69.2
CANSAT01G2297 Cannabis sativa HOM05D006010 ORTHO05D007381 3.0e-28 128.6 110 67.3
FvH4_1g30030 Fragaria vesca HOM05D006010 ORTHO05D007381 6.6e-28 127.5 111 64.9
FAN19G0427 Fragaria x ananassa HOM05D006010 ORTHO05D007381 6.6e-28 127.5 111 64.9
Manes.07G077600 Manihot esculenta HOM05D006010 ORTHO05D007381 6.6e-28 127.5 110 68.2
Phvul.004G098200 Phaseolus vulgaris HOM05D006010 ORTHO05D007381 6.6e-28 127.5 110 63.6
Cpa.g.sc116.81 Carica papaya HOM05D006010 ORTHO05D007381 2.5e-27 125.6 110 65.5
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 2.5e-27 125.6 113 69.9
TPR.G23647 Trifolium pratense HOM05D006010 ORTHO05D007381 4.3e-27 124.8 110 63.6
Potri.017G135500 Populus trichocarpa HOM05D006010 ORTHO05D007381 5.6e-27 124.4 110 67.3
CDE09G0547 Ceratophyllum demersum HOM05D006010 ORTHO05D007381 7.3e-27 124.0 107 61.7
Ca_05962_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 1.6e-26 122.9 111 64.0
ClCG05G010670 Citrullus lanatus HOM05D006010 ORTHO05D007381 2.1e-26 122.5 111 64.9
Sabra17G0111300 Salix brachista HOM05D006010 ORTHO05D007381 2.1e-26 122.5 110 65.5
Sabra17G0114300 Salix brachista HOM05D006010 ORTHO05D007381 2.1e-26 122.5 110 65.5
FAN28G0351 Fragaria x ananassa HOM05D006010 ORTHO05D007381 2.8e-26 122.1 111 63.1
Lalb_Chr10g0104261 Lupinus albus HOM05D006010 ORTHO05D007381 2.8e-26 122.1 111 63.1
GSVIVG01016007001 Vitis vinifera HOM05D006010 ORTHO05D007381 2.8e-26 122.1 108 68.5
Lj4g0009716 Lotus japonicus HOM05D006010 ORTHO05D007381 4.7e-26 121.3 110 60.9
CsaV3_2G017210 Cucumis sativus L. HOM05D006010 ORTHO05D007381 8.1e-26 120.6 112 64.3
FAN26G2228 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.1e-25 120.2 110 63.6
Cfa007784 Carpinus fangiana HOM05D006010 ORTHO05D007381 1.8e-25 119.4 110 63.6
TWI74G0222 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 1.8e-25 119.4 110 61.8
MELO3C020924.2 Cucumis melo HOM05D006010 ORTHO05D007381 4.0e-25 118.2 112 66.1
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 4.0e-25 118.2 107 65.4
Sed0022983 Sechium edule HOM05D006010 ORTHO05D007381 4.0e-25 118.2 109 62.4
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 6.9e-25 117.5 107 61.7
Haze_14288 Corylus avellana HOM05D006010 ORTHO05D007381 2.0e-24 115.9 110 61.8
Nitab4.5_0011135g0050 Nicotiana tabacum HOM05D006010 ORTHO05D007381 5.8e-24 114.4 113 59.3
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 7.6e-24 114.0 110 62.7
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 7.6e-24 114.0 101 66.3
Sed0003139 Sechium edule HOM05D006010 ORTHO05D007381 7.6e-24 114.0 111 61.3
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 7.6e-24 114.0 107 65.4
EL10Ac3g05516 Beta vulgaris HOM05D006010 ORTHO05D007381 9.9e-24 113.6 107 59.8
Ca_05837_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 9.9e-24 113.6 111 63.1
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 1.7e-23 112.8 108 63.0
COL.COLO4_31121 Corchorus olitorius HOM05D006010 ORTHO05D007381 2.2e-23 112.5 101 64.4
MD07G1042200 Malus domestica HOM05D006010 ORTHO05D007381 2.2e-23 112.5 95 67.4
Sopen11g006280 Solanum pennellii HOM05D006010 ORTHO05D007381 2.9e-23 112.1 107 64.5
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 8.4e-23 110.5 111 60.4
ECA236G4224 Erigeron canadensis HOM05D006010 ORTHO05D007381 1.1e-22 110.2 101 64.4
Thecc.06G019600 Theobroma cacao HOM05D006010 ORTHO05D007381 1.1e-22 110.2 107 64.5
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea HOM05D006010 ORTHO05D007381 1.4e-22 109.8 114 64.9
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea HOM05D006010 ORTHO05D007381 1.4e-22 109.8 114 64.9
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea HOM05D006010 ORTHO05D007381 1.4e-22 109.8 114 64.9
Psat2g045640 Pisum sativum HOM05D006010 ORTHO05D007381 1.9e-22 109.4 112 62.5
THA.LOC104827184 Tarenaya hassleriana HOM05D006010 ORTHO05D007381 4.2e-22 108.2 112 60.7
Lsat_1_v5_gn_3_65880 Lactuca sativa HOM05D006010 ORTHO05D007381 1.2e-21 106.7 114 59.6
Migut.K00936 Erythranthe guttata HOM05D006010 ORTHO05D007381 1.6e-21 106.3 108 59.3
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 4.6e-21 104.8 111 59.5
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 6.0e-21 104.4 107 62.6
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 6.0e-21 104.4 107 55.1
Hund11982 Selenicereus undatus HOM05D006010 ORTHO05D007381 7.8e-21 104.0 108 58.3
DCAR_014157 Daucus carota HOM05D006010 ORTHO05D007381 1.7e-20 102.8 112 61.6
Medtr5g077800 Medicago truncatula HOM05D006010 ORTHO05D007381 1.7e-20 102.8 110 55.5
FAN25G0538 Fragaria x ananassa HOM05D006010 ORTHO05D007381 3.9e-20 101.7 111 55.9
Eucgr.F02881 Eucalyptus grandis HOM05D006010 ORTHO05D007381 8.7e-20 100.5 111 61.3
unitig_0.g1692 Utricularia gibba HOM05D006010 ORTHO05D007381 8.7e-20 100.5 109 55.0
ATR0320G006 Amborella trichopoda HOM05D006010 ORTHO05D007381 4.3e-19 98.2 101 59.4
FAN28G1345 Fragaria x ananassa HOM05D006010 ORTHO05D007381 4.3e-19 98.2 111 53.2
Sed0026765 Sechium edule HOM05D006010 ORTHO05D007381 2.1e-18 95.9 108 55.6
AUR62016215 Chenopodium quinoa HOM05D006010 ORTHO05D007381 4.8e-18 94.7 109 56.9
SHI30126 Sapria himalayana HOM05D006010 ORTHO05D007381 1.1e-17 93.6 118 52.5
Gohir.A10G157800 Gossypium hirsutum HOM05D006010 ORTHO05D007381 1.4e-17 93.2 109 57.8
HanXRQChr15g0482991 Helianthus annuus HOM05D006010 ORTHO05D007381 2.4e-17 92.4 112 58.9
Gorai.011G090700 Gossypium raimondii HOM05D006010 ORTHO05D007381 7.6e-16 87.4 111 55.0
Gohir.D10G083400 Gossypium hirsutum HOM05D006010 ORTHO05D007381 1.3e-15 86.7 113 54.0
FAN23G2851 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.7e-15 86.3 111 48.6
Ah.05g176710 Amaranthus hybridus HOM05D006010 ORTHO05D007381 1.4e-14 83.2 107 49.5
BcaC05g30500 Brassica carinata HOM05D000919 ORTHO05D004442 3.2e-14 82.0 103 54.4
Aqoxy3G00232 Aquilegia oxysepala HOM05D006010 ORTHO05D007381 5.4e-14 81.3 109 52.3
Zm00001eb291600 Zea mays HOM05D006010 ORTHO05D007381 5.4e-14 81.3 100 53.0
Os05g0495100 Oryza sativa ssp. japonica HOM05D006010 ORTHO05D007381 9.3e-14 80.5 100 53.0
AUR62039273 Chenopodium quinoa HOM05D006010 ORTHO05D007381 1.2e-13 80.1 69 69.6
Glyma.02G082600 Glycine max HOM05D006010 ORTHO05D007381 3.5e-13 78.6 110 43.6
vmacro20589 Vaccinium macrocarpon HOM05D006010 ORTHO05D007381 7.9e-13 77.4 95 53.7
Sp3g01890 Schrenkiella parvula HOM05D006010 ORTHO05D007381 1.3e-12 76.6 69 63.8
Aa31LG5G13330 Aethionema arabicum HOM05D006010 ORTHO05D007381 8.7e-12 73.9 112 44.6
Glyma.16G168300 Glycine max HOM05D006010 ORTHO05D007381 1.5e-11 73.2 110 44.5
SEGI_38635 Sequoiadendron giganteum HOM05D006010 ORTHO05D007381 1.9e-11 72.8 77 49.4
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 1.8e-09 66.2 103 46.6
Solyc11g011490.2 Solanum lycopersicum HOM05D006010 ORTHO05D007381 2.6e-08 62.4 47 76.6
FAN21G0982 Fragaria x ananassa HOM05D006010 ORTHO05D007381 5.8e-08 61.2 62 53.2
Sc22g0001300 Simmondsia chinensis HOM05D006010 ORTHO05D007381 9.9e-08 60.5 41 78.0
C09p75990 Brassica napus HOM05D006010 ORTHO05D007381 1.3e-07 60.1 42 76.2
BolC5t35058H Brassica oleracea HOM05D006010 ORTHO05D007381 1.3e-07 60.1 42 76.2
SGA_v2.0_scaffold115G32097 Striga asiatica HOM05D006010 ORTHO05D007381 2.2e-07 59.3 100 45.0
AT3G02860 Arabidopsis thaliana HOM05D006010 ORTHO05D007381 3.8e-07 58.5 42 73.8
Carub.0003s0196 Capsella rubella HOM05D006010 ORTHO05D007381 3.8e-07 58.5 42 71.4
A05p44250 Brassica napus HOM05D006010 ORTHO05D007381 6.4e-07 57.8 41 73.2
BraA06t23281Z Brassica rapa HOM05D000919 ORTHO05D004442 6.4e-07 57.8 41 73.2
CARHR076870 Cardamine hirsuta HOM05D006010 ORTHO05D007381 6.4e-07 57.8 41 73.2
AL3G12280 Arabidopsis lyrata HOM05D006010 ORTHO05D007381 1.1e-06 57.0 41 73.2
Pp3c12_7630 Physcomitrium patens HOM05D006010 ORTHO05D007381 1.1e-06 57.0 102 40.2

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (3 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (0 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (7 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (1 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (0 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (3 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (4 genes)
Zea mays (1 genes)

Program Settings