Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044429 Camellia sinensis var. sinensis HOM05D005267 ORTHO05D006303 3.4e-132 474.9 231 100.0
Actinidia37788 Actinidia chinensis HOM05D005267 ORTHO05D006303 5.9e-108 394.4 236 80.9
Rhsim03G0057300 Rhododendron simsii HOM05D005267 ORTHO05D006303 5.5e-98 361.3 244 75.0
Cc06_g07120 Coffea canephora HOM05D005267 ORTHO05D006303 2.8e-94 349.0 222 75.2
Solyc10g081590.2 Solanum lycopersicum HOM05D005267 ORTHO05D006303 1.3e-91 340.1 233 70.0
Sopen10g032100 Solanum pennellii HOM05D005267 ORTHO05D006303 2.2e-91 339.3 233 69.5
Nitab4.5_0008653g0020 Nicotiana tabacum HOM05D005267 ORTHO05D006303 3.8e-91 338.6 239 70.7
PGSC0003DMG400028129 Solanum tuberosum HOM05D005267 ORTHO05D006303 3.8e-91 338.6 233 69.5
Cfa020104 Carpinus fangiana HOM05D005267 ORTHO05D006303 9.4e-90 334.0 245 68.6
Nitab4.5_0006454g0020 Nicotiana tabacum HOM05D005267 ORTHO05D006303 1.2e-89 333.6 239 69.9
Oeu063094.3 Olea europaea HOM05D005267 ORTHO05D006303 2.7e-89 332.4 211 74.9
Atru.chr8.1242 Acer truncatum HOM05D005267 ORTHO05D006303 4.7e-89 331.6 238 69.3
Nn6g32442 Nelumbo nucifera HOM05D005267 ORTHO05D006303 2.3e-88 329.3 233 69.1
Medtr1g054315 Medicago truncatula HOM05D005267 ORTHO05D006303 4.0e-88 328.6 231 68.4
PGR142G1416 Punica granatum HOM05D005267 ORTHO05D006303 5.2e-88 328.2 240 67.9
MELO3C024594.2 Cucumis melo HOM05D005267 ORTHO05D006303 8.8e-88 327.4 219 71.7
Ca_18103_v3 Cicer arietinum L. HOM05D005267 ORTHO05D006303 1.5e-87 326.6 226 69.0
TAR623G0682 Trochodendron aralioides HOM05D005267 ORTHO05D006303 2.0e-87 326.2 237 67.9
Cpa.g.sc85.6 Carica papaya HOM05D005267 ORTHO05D006303 2.6e-87 325.9 223 70.9
Eucgr.A02521 Eucalyptus grandis HOM05D005267 ORTHO05D006303 3.4e-87 325.5 219 73.1
SGA_v2.0_scaffold41G15783 Striga asiatica HOM05D005267 ORTHO05D006303 3.4e-87 325.5 215 71.2
Thecc.05G181400 Theobroma cacao HOM05D005267 ORTHO05D006303 4.4e-87 325.1 238 68.9
COL.COLO4_29458 Corchorus olitorius HOM05D005267 ORTHO05D006303 7.5e-87 324.3 246 67.9
Haze_20086 Corylus avellana HOM05D005267 ORTHO05D006303 7.5e-87 324.3 245 66.5
CsaV3_6G041190 Cucumis sativus L. HOM05D005267 ORTHO05D006303 9.8e-87 323.9 225 71.1
Migut.L01860 Erythranthe guttata HOM05D005267 ORTHO05D006303 9.8e-87 323.9 233 67.4
Lalb_Chr02g0153991 Lupinus albus HOM05D005267 ORTHO05D006303 9.8e-87 323.9 214 72.4
ECA248G0309 Erigeron canadensis HOM05D005267 ORTHO05D006303 1.3e-86 323.6 234 67.5
HanXRQChr01g0026301 Helianthus annuus HOM05D005267 ORTHO05D006303 1.3e-86 323.6 219 70.8
Psat6g110480 Pisum sativum HOM05D005267 ORTHO05D006303 4.8e-86 321.6 214 70.6
TWI77G0597 Tripterygium wilfordii HOM05D005267 ORTHO05D006303 4.8e-86 321.6 239 65.3
Aqoxy1G00565 Aquilegia oxysepala HOM05D005267 ORTHO05D006303 6.3e-86 321.2 244 65.2
Ciclev10012610m.g Citrus clementina HOM05D005267 ORTHO05D006303 8.3e-86 320.9 242 65.3
GSVIVG01022470001 Vitis vinifera HOM05D005267 ORTHO05D006303 8.3e-86 320.9 200 74.0
arahy.Tifrunner.gnm1.ann1.H25EQ1 Arachis hypogaea HOM05D005267 ORTHO05D006303 1.8e-85 319.7 229 66.4
DCAR_013470 Daucus carota HOM05D006729 ORTHO05D008502 1.8e-85 319.7 222 68.5
ClCG01G015080 Citrullus lanatus HOM05D005267 ORTHO05D006303 2.4e-85 319.3 221 69.2
Glyma.09G103300 Glycine max HOM05D005267 ORTHO05D006303 3.1e-85 318.9 223 68.2
arahy.Tifrunner.gnm1.ann1.3RXG3F Arachis hypogaea HOM05D005267 ORTHO05D006303 4.1e-85 318.5 229 65.9
Lj5g0006264 Lotus japonicus HOM05D005267 ORTHO05D006303 4.1e-85 318.5 213 70.9
Lalb_Chr21g0316191 Lupinus albus HOM05D005267 ORTHO05D006303 5.4e-85 318.2 217 69.1
QL07p025833 Quercus lobata HOM05D005267 ORTHO05D006303 5.4e-85 318.2 248 65.7
TPR.G30771 Trifolium pratense HOM05D005267 ORTHO05D006303 5.4e-85 318.2 212 70.3
Duzib128G1921 Durio zibethinus HOM05D005267 ORTHO05D006303 7.0e-85 317.8 245 65.7
MBI05_g37655_MAGBIO Magnolia biondii HOM05D005267 ORTHO05D006303 7.0e-85 317.8 227 67.0
CiPaw.10G022300 Carya illinoinensis HOM05D005267 ORTHO05D006303 9.1e-85 317.4 222 69.8
Eucgr.A02526 Eucalyptus grandis HOM05D005267 ORTHO05D006303 2.7e-84 315.8 214 72.4
Glyma.02G167800 Glycine max HOM05D005267 ORTHO05D006303 3.5e-84 315.5 217 69.6
PSO384G1433 Papaver somniferum HOM05D005267 ORTHO05D006303 4.5e-84 315.1 243 64.6
Lj1A1066G52 Lonicera japonica HOM05D005267 ORTHO05D006303 1.0e-83 313.9 236 69.1
FAN02G1071 Fragaria x ananassa HOM05D005267 ORTHO05D006303 2.3e-83 312.8 221 67.4
Lsat_1_v5_gn_1_56341 Lactuca sativa HOM05D005267 ORTHO05D006303 2.3e-83 312.8 225 66.7
Potri.016G063600 Populus trichocarpa HOM05D005267 ORTHO05D006303 2.9e-83 312.4 219 70.3
FvH4_6g21270 Fragaria vesca HOM05D005267 ORTHO05D006303 1.1e-82 310.5 221 67.0
unitig_899.g15196 Utricularia gibba HOM05D005267 ORTHO05D006303 1.1e-82 310.5 215 67.4
RcHm_v2.0_Chr3g0477741 Rosa chinensis HOM05D005267 ORTHO05D006303 1.9e-82 309.7 216 67.1
RcHm_v2.0_Chr3g0477781 Rosa chinensis HOM05D005267 ORTHO05D006303 1.9e-82 309.7 216 67.1
FAN05G1850 Fragaria x ananassa HOM05D005267 ORTHO05D006303 2.5e-82 309.3 221 67.4
FAN14G1206 Fragaria x ananassa HOM05D005267 ORTHO05D006303 2.5e-82 309.3 221 66.5
CANSAT64G2985 Cannabis sativa HOM05D005267 ORTHO05D006303 9.5e-82 307.4 234 62.8
Prupe.7G087000 Prunus persica HOM05D005267 ORTHO05D006303 2.1e-81 306.2 222 66.2
Sabra16G0066000 Salix brachista HOM05D005267 ORTHO05D006303 2.1e-81 306.2 242 63.6
Sed0012434 Sechium edule HOM05D005267 ORTHO05D006303 2.1e-81 306.2 215 68.8
EL10Ac5g11779 Beta vulgaris HOM05D005267 ORTHO05D006303 1.4e-80 303.5 226 65.5
THA.LOC104821240 Tarenaya hassleriana HOM05D005267 ORTHO05D006303 3.0e-80 302.4 226 62.8
FAN05G5707 Fragaria x ananassa HOM05D005267 ORTHO05D006303 1.5e-79 300.1 235 63.0
MD14G1048200 Malus domestica HOM05D005267 ORTHO05D006303 9.8e-79 297.4 232 64.2
Phvul.007G264300 Phaseolus vulgaris HOM05D005267 ORTHO05D006303 2.8e-78 295.8 217 63.1
VMungo0720G2658 Vigna mungo HOM05D005267 ORTHO05D006303 1.1e-77 293.9 219 62.1
Os03g0749900 Oryza sativa ssp. japonica HOM05D005267 ORTHO05D006303 1.4e-77 293.5 230 63.9
Zm00001eb057270 Zea mays HOM05D005267 ORTHO05D006303 1.8e-77 293.1 235 62.1
AUR62036286 Chenopodium quinoa HOM05D005267 ORTHO05D006303 2.4e-77 292.7 231 63.6
Thhalv10006199m.g Eutrema salsugineum HOM05D005267 ORTHO05D006303 9.2e-77 290.8 227 63.4
Carub.0005s2521 Capsella rubella HOM05D005267 ORTHO05D006303 2.0e-76 289.7 231 62.3
CDE05G1441 Ceratophyllum demersum HOM05D005267 ORTHO05D006303 1.0e-75 287.3 210 65.2
AUR62039735 Chenopodium quinoa HOM05D005267 ORTHO05D006303 2.9e-75 285.8 258 58.1
BcaC07g40203 Brassica carinata HOM05D005267 ORTHO05D006303 3.8e-75 285.4 239 57.3
Sp5g04410 Schrenkiella parvula HOM05D005267 ORTHO05D006303 3.8e-75 285.4 227 61.2
AT3G58470 Arabidopsis thaliana HOM05D005267 ORTHO05D006303 5.0e-75 285.0 227 61.2
BraA09t40549Z Brassica rapa HOM05D005267 ORTHO05D006303 1.9e-74 283.1 220 61.4
CARHR168860 Cardamine hirsuta HOM05D005267 ORTHO05D006303 1.9e-74 283.1 227 59.9
Hund15032 Selenicereus undatus HOM05D005267 ORTHO05D006303 2.5e-74 282.7 220 65.5
Aa31LG10G13030 Aethionema arabicum HOM05D006729 ORTHO05D008502 7.3e-74 281.2 216 62.5
AL5G40230 Arabidopsis lyrata HOM05D005267 ORTHO05D006303 3.6e-73 278.9 227 60.4
Peaxi162Scf00060g01112 Petunia axillaris HOM05D005267 ORTHO05D006303 3.6e-73 278.9 219 64.8
BcaC07g40256 Brassica carinata HOM05D005267 ORTHO05D006303 1.4e-72 276.9 216 61.1
ATR0697G123 Amborella trichopoda HOM05D006729 ORTHO05D008502 6.8e-72 274.6 229 59.4
Dinv11912 Davidia involucrata HOM05D005267 ORTHO05D006303 2.6e-71 272.7 214 66.4
BolC8t50983H Brassica oleracea HOM05D006729 ORTHO05D008502 1.9e-69 266.5 210 61.0
C08p33850 Brassica napus HOM05D006729 ORTHO05D008502 4.1e-69 265.4 210 60.5
A09p51030 Brassica napus HOM05D006729 ORTHO05D008502 1.2e-68 263.8 207 60.9
Gorai.006G146100 Gossypium raimondii HOM05D005267 ORTHO05D006303 3.3e-66 255.8 250 56.4
Gohir.A09G131300 Gossypium hirsutum HOM05D005267 ORTHO05D006303 8.9e-64 247.7 228 57.0
vmacro07530 Vaccinium macrocarpon HOM05D005267 ORTHO05D006303 2.4e-61 239.6 132 84.1
Sc01g0005180 Simmondsia chinensis HOM05D005267 ORTHO05D006303 8.6e-59 231.1 196 62.2
Pp3c20_23410 Physcomitrium patens HOM05D005267 ORTHO05D006303 7.3e-58 228.0 234 50.0
Mapoly0207s0006 Marchantia polymorpha HOM05D005267 ORTHO05D006303 9.5e-58 227.6 224 50.4
CAN.G128.157 Capsicum annuum HOM05D005267 ORTHO05D006303 3.6e-57 225.7 128 78.9
Hund24299 Selenicereus undatus HOM05D005267 ORTHO05D006303 2.2e-54 216.5 128 76.6
Hund24301 Selenicereus undatus HOM05D005267 ORTHO05D006303 2.2e-54 216.5 128 76.6
Rhsim03G0057000 Rhododendron simsii HOM05D005267 ORTHO05D006303 9.2e-53 211.1 167 65.9
Zm00001eb155770 Zea mays HOM05D000737 ORTHO05D006303 1.3e-51 207.2 190 56.8
Zm00001eb307210 Zea mays HOM05D005267 ORTHO05D006303 6.2e-49 198.4 203 53.7
Gohir.D09G127600 Gossypium hirsutum HOM05D005267 ORTHO05D006303 1.5e-47 193.7 151 64.2
Gohir.D09G127100 Gossypium hirsutum HOM05D005267 ORTHO05D006303 4.4e-47 192.2 150 64.0
Manes.08G038900 Manihot esculenta HOM05D005267 ORTHO05D006303 4.9e-46 188.7 145 65.5
BcaC07g40255 Brassica carinata HOM05D005267 ORTHO05D006303 1.4e-45 187.2 182 52.7
CBR_g551 Chara braunii HOM05D005267 ORTHO05D006303 5.3e-40 168.7 255 35.7
Zm00001eb020160 Zea mays HOM05D005267 ORTHO05D006303 4.4e-39 165.6 104 71.2
BolC4t23005H Brassica oleracea HOM05D005267 ORTHO05D006303 4.2e-37 159.1 137 57.7
arahy.Tifrunner.gnm1.ann1.TFGA9S Arachis hypogaea HOM05D005267 ORTHO05D006303 3.5e-36 156.0 106 66.0
SEGI_05913 Sequoiadendron giganteum HOM05D005267 ORTHO05D006303 6.0e-36 155.2 160 50.6
Zm00001eb298070 Zea mays HOM05D005267 ORTHO05D006303 2.5e-34 149.8 135 54.8
AagrBONN_evm.TU.Sc2ySwM_344.4688 Anthoceros agrestis HOM05D005267 ORTHO05D006303 1.6e-33 147.1 152 46.1
C04p14160 Brassica napus HOM05D005267 ORTHO05D006303 1.7e-30 137.1 117 60.7
Gorai.011G111300 Gossypium raimondii HOM05D005267 ORTHO05D006303 1.4e-29 134.0 77 79.2
Gorai.001G205400 Gossypium raimondii HOM05D005267 ORTHO05D006303 3.2e-29 132.9 79 75.9
Gohir.D12G044850 Gossypium hirsutum HOM05D005267 ORTHO05D006303 4.2e-29 132.5 78 79.5
Gohir.D03G023232 Gossypium hirsutum HOM05D005267 ORTHO05D006303 9.3e-29 131.3 79 78.5
Gohir.A01G123000 Gossypium hirsutum HOM05D005267 ORTHO05D006303 1.6e-28 130.6 79 77.2
Gohir.A06G056200 Gossypium hirsutum HOM05D005267 ORTHO05D006303 1.6e-28 130.6 79 77.2
Gorai.013G089700 Gossypium raimondii HOM05D005267 ORTHO05D006303 1.6e-28 130.6 77 76.6
Gohir.D08G106200 Gossypium hirsutum HOM05D005267 ORTHO05D006303 2.7e-28 129.8 78 78.2
Gohir.D11G259301 Gossypium hirsutum HOM05D005267 ORTHO05D006303 2.7e-28 129.8 78 78.2
Rhsim03G0056100 Rhododendron simsii HOM05D000045 ORTHO05D006303 2.1e-25 120.2 121 58.7
MSTRG.10424 Avicennia marina HOM05D005267 ORTHO05D006303 4.8e-25 119.0 88 65.9
Zm00001eb334640 Zea mays HOM05D005267 ORTHO05D006303 9.0e-24 114.8 68 73.5
Zm00001eb096050 Zea mays HOM05D005267 ORTHO05D006303 3.4e-23 112.8 132 50.8
arahy.Tifrunner.gnm1.ann1.74GVQ2 Arachis hypogaea HOM05D005267 ORTHO05D006303 1.0e-19 101.3 66 66.7
HPP92_004175 Vanilla planifolia HOM05D002029 ORTHO05D002158 5.6e-18 95.5 100 52.0
Gohir.D06G067600 Gossypium hirsutum HOM05D003508 ORTHO05D006303 1.6e-17 94.0 85 58.8
Gohir.D06G044601 Gossypium hirsutum HOM05D003508 ORTHO05D006303 9.0e-16 88.2 49 77.6
arahy.Tifrunner.gnm1.ann1.PYJ9JQ Arachis hypogaea HOM05D005267 ORTHO05D006303 2.0e-15 87.0 64 62.5
A04p02570 Brassica napus HOM05D005267 ORTHO05D006303 3.4e-15 86.3 73 54.8
BcaB02g08262 Brassica carinata HOM05D005267 ORTHO05D006303 4.5e-15 85.9 93 48.4
ClCG03G011770 Citrullus lanatus HOM05D000002 ORTHO05D015610 7.6e-15 85.1 62 64.5
arahy.Tifrunner.gnm1.ann1.HYSL0N Arachis hypogaea HOM05D005267 ORTHO05D006303 1.0e-14 84.7 52 69.2
Cfa022098 Carpinus fangiana HOM05D005267 ORTHO05D125748 1.0e-14 84.7 163 32.5
Glyma.03G214201 Glycine max HOM05D005267 ORTHO05D006303 1.3e-14 84.3 80 52.5
Gorai.011G067100 Gossypium raimondii HOM05D005267 ORTHO05D006303 3.8e-14 82.8 51 70.6
VMungo0464G2161 Vigna mungo HOM05D005267 ORTHO05D006303 3.9e-11 72.8 53 50.9
Cre10.g418700 Chlamydomonas reinhardtii HOM05D005267 ORTHO05D006303 6.7e-11 72.0 176 29.0
Mapoly0004s0240 Marchantia polymorpha HOM05D005267 ORTHO05D006303 1.9e-10 70.5 169 26.6
MCO14G360 Micromonas commoda HOM05D005267 ORTHO05D006303 1.9e-10 70.5 163 26.4
BolC9t56010H Brassica oleracea HOM05D008384 ORTHO05D042359 4.3e-10 69.3 67 52.2
SMO143G0102 Selaginella moellendorffii HOM05D005267 ORTHO05D006303 1.6e-09 67.4 166 25.3
CBR_g49867 Chara braunii HOM05D000019 ORTHO05D000353 2.8e-09 66.6 186 25.3
Pp3c20_11400 Physcomitrium patens HOM05D005267 ORTHO05D006303 4.8e-09 65.9 171 25.1
AagrBONN_evm.TU.Sc2ySwM_362.204 Anthoceros agrestis HOM05D005267 ORTHO05D006303 1.2e-07 61.2 130 30.0
Pp3c8_10880 Physcomitrium patens HOM05D005267 ORTHO05D006303 3.4e-07 59.7 206 21.8
arahy.Tifrunner.gnm1.ann1.4NE9EM Arachis hypogaea HOM05D005267 ORTHO05D006303 8.5e-06 55.1 34 61.8

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (2 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (7 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (3 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (2 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (2 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (3 genes)
Gossypium hirsutum (11 genes)
Gossypium raimondii (5 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (2 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (3 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (3 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (3 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (7 genes)

Program Settings