Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043183 Camellia sinensis var. sinensis HOM05D004812 ORTHO05D005721 7.1e-190 667.2 347 100.0
Dinv39198 Davidia involucrata HOM05D004812 ORTHO05D005721 7.9e-56 221.9 200 60.5
Actinidia29636 Actinidia chinensis HOM05D004812 ORTHO05D005721 5.3e-52 209.1 207 58.0
Manes.18G050200 Manihot esculenta HOM05D004812 ORTHO05D005721 6.9e-52 208.8 169 67.5
Dinv44924 Davidia involucrata HOM05D004812 ORTHO05D005721 2.9e-50 203.4 202 55.4
vmacro04604 Vaccinium macrocarpon HOM05D004812 ORTHO05D005721 1.6e-48 197.6 195 62.1
Duzib093G1850 Durio zibethinus HOM05D004812 ORTHO05D005721 4.6e-48 196.1 177 59.9
CSS0032884 Camellia sinensis var. sinensis HOM05D004812 ORTHO05D005721 6.0e-48 195.7 206 54.9
Thecc.08G083100 Theobroma cacao HOM05D004812 ORTHO05D005721 1.3e-47 194.5 175 58.9
Duzib041G0236 Durio zibethinus HOM05D004812 ORTHO05D005721 1.8e-47 194.1 168 60.7
TAR381G1267 Trochodendron aralioides HOM05D004812 ORTHO05D005721 2.3e-47 193.7 183 55.7
FvH4_2g32490 Fragaria vesca HOM05D004812 ORTHO05D005721 2.5e-46 190.3 181 53.6
Manes.05G184100 Manihot esculenta HOM05D004812 ORTHO05D005721 2.5e-46 190.3 181 61.3
QL09p016104 Quercus lobata HOM05D004812 ORTHO05D005721 4.3e-46 189.5 198 52.5
CiPaw.07G171000 Carya illinoinensis HOM05D004812 ORTHO05D005721 5.6e-46 189.1 195 56.9
Prupe.1G418000 Prunus persica HOM05D004812 ORTHO05D005721 5.6e-46 189.1 199 52.3
Duzib041G0573 Durio zibethinus HOM05D004812 ORTHO05D005721 7.4e-46 188.7 178 58.4
Atru.chr13.882 Acer truncatum HOM05D004812 ORTHO05D005721 2.1e-45 187.2 197 54.3
Hma1.2p1_1230F.1_g268750 Hydrangea macrophylla HOM05D004812 ORTHO05D005721 2.8e-45 186.8 204 52.9
CiPaw.08G053200 Carya illinoinensis HOM05D004812 ORTHO05D005721 6.2e-45 185.7 195 54.9
Cfa013725 Carpinus fangiana HOM05D004812 ORTHO05D005721 1.4e-44 184.5 191 53.4
Actinidia19286 Actinidia chinensis HOM05D004812 ORTHO05D005721 2.4e-44 183.7 201 54.2
Haze_22372 Corylus avellana HOM05D004812 ORTHO05D005721 6.9e-44 182.2 191 52.9
Lj4A77G54 Lonicera japonica HOM05D004812 ORTHO05D005721 4.5e-43 179.5 219 49.8
Rhsim07G0216800 Rhododendron simsii HOM05D004812 ORTHO05D005721 4.5e-43 179.5 210 51.0
Potri.002G114600 Populus trichocarpa HOM05D004812 ORTHO05D005721 1.3e-42 177.9 183 53.6
Gorai.009G222500 Gossypium raimondii HOM05D004812 ORTHO05D005721 1.7e-42 177.6 195 52.3
TWI56G0383 Tripterygium wilfordii HOM05D004812 ORTHO05D005721 1.7e-42 177.6 179 54.7
arahy.Tifrunner.gnm1.ann1.4PX4MG Arachis hypogaea HOM05D004812 ORTHO05D005721 2.2e-42 177.2 179 53.6
Glyma.04G048400 Glycine max HOM05D004812 ORTHO05D005721 2.2e-42 177.2 177 54.8
Cpa.g.sc160.27 Carica papaya HOM05D004812 ORTHO05D005721 3.8e-42 176.4 182 54.4
ClCG08G016760 Citrullus lanatus HOM05D004812 ORTHO05D005721 3.8e-42 176.4 202 55.0
FAN15G0694 Fragaria x ananassa HOM05D004812 ORTHO05D005721 3.8e-42 176.4 201 47.3
FAN20G0597 Fragaria x ananassa HOM05D004812 ORTHO05D005721 3.8e-42 176.4 201 47.3
FAN27G1358 Fragaria x ananassa HOM05D004812 ORTHO05D005721 3.8e-42 176.4 201 47.3
MELO3C010780.2 Cucumis melo HOM05D004812 ORTHO05D005721 4.9e-42 176.0 204 54.4
Gohir.D05G215800 Gossypium hirsutum HOM05D004812 ORTHO05D005721 4.9e-42 176.0 192 51.0
FAN24G1448 Fragaria x ananassa HOM05D004812 ORTHO05D005721 6.5e-42 175.6 201 46.8
Cc10_g07760 Coffea canephora HOM05D004812 ORTHO05D005721 8.4e-42 175.3 197 50.3
Ciclev10002309m.g Citrus clementina HOM05D004812 ORTHO05D005721 1.1e-41 174.9 199 57.8
GSVIVG01009286001 Vitis vinifera HOM05D004812 ORTHO05D005721 1.9e-41 174.1 198 56.6
Nn6g34543 Nelumbo nucifera HOM05D004812 ORTHO05D005721 2.5e-41 173.7 199 49.2
MSTRG.923 Avicennia marina HOM05D004812 ORTHO05D005721 3.2e-41 173.3 181 54.7
Lj1g0006267 Lotus japonicus HOM05D004812 ORTHO05D005721 5.5e-41 172.6 176 52.8
Glyma.14G090500 Glycine max HOM05D004812 ORTHO05D005721 7.1e-41 172.2 161 57.1
Gohir.D06G024100 Gossypium hirsutum HOM05D004812 ORTHO05D005721 7.1e-41 172.2 179 53.1
Gorai.010G028600 Gossypium raimondii HOM05D004812 ORTHO05D005721 7.1e-41 172.2 179 53.1
Glyma.06G049600 Glycine max HOM05D004812 ORTHO05D005721 9.3e-41 171.8 172 54.1
Gohir.A06G026800 Gossypium hirsutum HOM05D004812 ORTHO05D005721 9.3e-41 171.8 179 53.6
Gohir.A05G212600 Gossypium hirsutum HOM05D004812 ORTHO05D005721 1.2e-40 171.4 191 51.8
Lalb_Chr23g0267661 Lupinus albus HOM05D004812 ORTHO05D005721 1.2e-40 171.4 180 52.2
Peaxi162Scf01161g00329 Petunia axillaris HOM05D004812 ORTHO05D005721 1.6e-40 171.0 187 52.9
PGSC0003DMG400004945 Solanum tuberosum HOM05D004812 ORTHO05D005721 1.6e-40 171.0 191 53.4
Sabra02G0090600 Salix brachista HOM05D004812 ORTHO05D005721 2.1e-40 170.6 197 50.3
Psat5g042400 Pisum sativum HOM05D004812 ORTHO05D005721 3.5e-40 169.9 174 58.6
Sabra05G0117000 Salix brachista HOM05D004812 ORTHO05D005721 3.5e-40 169.9 192 51.6
Ca_15883_v3 Cicer arietinum L. HOM05D004812 ORTHO05D005721 4.6e-40 169.5 171 60.8
Potri.005G146600 Populus trichocarpa HOM05D004812 ORTHO05D005721 6.0e-40 169.1 183 52.5
Lj5g0016152 Lotus japonicus HOM05D004812 ORTHO05D005721 7.9e-40 168.7 175 58.3
Lalb_Chr24g0399541 Lupinus albus HOM05D004812 ORTHO05D005721 7.9e-40 168.7 175 57.1
CsaV3_2G025860 Cucumis sativus L. HOM05D004812 ORTHO05D005721 1.3e-39 167.9 204 52.9
RcHm_v2.0_Chr6g0310161 Rosa chinensis HOM05D004812 ORTHO05D005721 1.8e-39 167.5 195 53.8
Sopen04g031020 Solanum pennellii HOM05D004812 ORTHO05D005721 1.8e-39 167.5 187 58.3
MSTRG.25014 Avicennia marina HOM05D004812 ORTHO05D005721 2.3e-39 167.2 184 53.8
Ca_06989_v3 Cicer arietinum L. HOM05D004812 ORTHO05D005721 2.3e-39 167.2 166 58.4
Sed0005944 Sechium edule HOM05D004812 ORTHO05D005721 2.3e-39 167.2 215 53.0
arahy.Tifrunner.gnm1.ann1.HYM163 Arachis hypogaea HOM05D004812 ORTHO05D005721 3.0e-39 166.8 171 56.7
Nitab4.5_0001494g0140 Nicotiana tabacum HOM05D004812 ORTHO05D005721 3.9e-39 166.4 187 57.2
arahy.Tifrunner.gnm1.ann1.PWJU0J Arachis hypogaea HOM05D004812 ORTHO05D005721 5.1e-39 166.0 171 57.3
Solyc04g077430.4 Solanum lycopersicum HOM05D004812 ORTHO05D005721 8.7e-39 165.2 187 57.8
CAN.G416.6 Capsicum annuum HOM05D004812 ORTHO05D005721 1.1e-38 164.9 175 60.0
MD08G1076700 Malus domestica HOM05D004812 ORTHO05D005721 2.5e-38 163.7 196 53.6
Phvul.001G031700 Phaseolus vulgaris HOM05D004812 ORTHO05D005721 3.3e-38 163.3 178 52.2
ECA232G4694 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.3e-38 162.9 165 52.1
TWI36G1081 Tripterygium wilfordii HOM05D004812 ORTHO05D005721 5.7e-38 162.5 186 50.5
VMungo1309G0464 Vigna mungo HOM05D004812 ORTHO05D005721 5.7e-38 162.5 178 50.6
MD15G1064000 Malus domestica HOM05D004812 ORTHO05D005721 1.3e-37 161.4 201 51.7
CANSAT11G0724 Cannabis sativa HOM05D004812 ORTHO05D005721 6.2e-37 159.1 211 51.7
TPR.G30200 Trifolium pratense HOM05D004812 ORTHO05D005721 6.2e-37 159.1 177 55.9
VMungo0647G0241 Vigna mungo HOM05D004812 ORTHO05D005721 8.2e-37 158.7 156 57.1
EL10Ac1g02340 Beta vulgaris HOM05D004812 ORTHO05D005721 1.4e-36 157.9 170 56.5
TPR.G13010 Trifolium pratense HOM05D004812 ORTHO05D005721 1.8e-36 157.5 181 52.5
Medtr3g103530 Medicago truncatula HOM05D004812 ORTHO05D005721 4.1e-36 156.4 171 55.6
Psat6g018520 Pisum sativum HOM05D004812 ORTHO05D005721 6.9e-36 155.6 178 50.6
Medtr1g017260 Medicago truncatula HOM05D004812 ORTHO05D005721 9.0e-36 155.2 175 50.3
Hund05266 Selenicereus undatus HOM05D004812 ORTHO05D005721 1.5e-35 154.5 195 50.8
Migut.C00441 Erythranthe guttata HOM05D004812 ORTHO05D005721 2.2e-34 150.6 196 46.4
MBI16_g36640_MAGBIO Magnolia biondii HOM05D004812 ORTHO05D005721 2.2e-34 150.6 203 46.8
Aqoxy6G02958 Aquilegia oxysepala HOM05D004812 ORTHO05D005721 2.9e-34 150.2 184 47.3
Rhsim06G0065600 Rhododendron simsii HOM05D004812 ORTHO05D005721 8.4e-34 148.7 187 50.8
vmacro21405 Vaccinium macrocarpon HOM05D004812 ORTHO05D005721 1.4e-33 147.9 188 49.5
PGR031G3368 Punica granatum HOM05D004812 ORTHO05D005721 1.9e-33 147.5 181 52.5
Nitab4.5_0024059g0010 Nicotiana tabacum HOM05D004812 ORTHO05D005721 3.2e-33 146.7 132 69.7
Migut.N02802 Erythranthe guttata HOM05D004812 ORTHO05D005721 5.5e-33 146.0 198 45.5
CARHR259230 Cardamine hirsuta HOM05D004812 ORTHO05D005721 2.1e-32 144.1 179 45.8
SGA_v2.0_scaffold238G43884 Striga asiatica HOM05D004812 ORTHO05D005721 2.7e-32 143.7 181 54.7
HanXRQChr08g0226381 Helianthus annuus HOM05D004812 ORTHO05D005721 3.5e-32 143.3 187 43.3
Oeu048563.2 Olea europaea HOM05D004812 ORTHO05D005721 6.1e-32 142.5 189 53.4
AL6G41350 Arabidopsis lyrata HOM05D004812 ORTHO05D005721 7.9e-32 142.1 191 45.0
THA.LOC104799834 Tarenaya hassleriana HOM05D004812 ORTHO05D005721 1.0e-31 141.7 194 44.8
Eucgr.F02213 Eucalyptus grandis HOM05D004812 ORTHO05D005721 1.8e-31 141.0 187 44.9
Thhalv10028923m.g Eutrema salsugineum HOM05D004812 ORTHO05D005721 1.8e-31 141.0 198 45.5
Sc02g0008200 Simmondsia chinensis HOM05D004812 ORTHO05D005721 4.3e-30 136.3 128 58.6
Ah.05g166930 Amaranthus hybridus HOM05D004812 ORTHO05D005721 7.4e-30 135.6 185 47.6
PSO541G3106 Papaver somniferum HOM05D004812 ORTHO05D005721 9.7e-30 135.2 193 42.5
Aa31sc619G20 Aethionema arabicum HOM05D004812 ORTHO05D005721 6.3e-29 132.5 194 42.8
PSO675G4508 Papaver somniferum HOM05D004812 ORTHO05D005721 8.2e-29 132.1 184 43.5
Sp6g10230 Schrenkiella parvula HOM05D004812 ORTHO05D005721 8.2e-29 132.1 198 41.9
BcaB01g02879 Brassica carinata HOM05D004812 ORTHO05D005721 1.4e-28 131.3 198 41.9
Eucgr.F00104 Eucalyptus grandis HOM05D004812 ORTHO05D005721 1.2e-27 128.3 182 43.4
CDE02G0400 Ceratophyllum demersum HOM05D004812 ORTHO05D005721 2.0e-27 127.5 183 49.2
HanXRQChr04g0110461 Helianthus annuus HOM05D004812 ORTHO05D005721 2.0e-27 127.5 191 44.0
BcaC01g04783 Brassica carinata HOM05D004812 ORTHO05D005721 5.9e-27 125.9 200 43.5
C03p33720 Brassica napus HOM05D004812 ORTHO05D005721 5.9e-27 125.9 200 43.5
Os03g0728100 Oryza sativa ssp. japonica HOM05D004812 ORTHO05D005721 8.5e-26 122.1 192 38.5
AUR62039348 Chenopodium quinoa HOM05D004812 ORTHO05D005721 1.4e-25 121.3 206 41.7
ATR0019G011 Amborella trichopoda HOM05D004812 ORTHO05D005721 1.9e-25 120.9 135 58.5
unitig_744.g24118 Utricularia gibba HOM05D004812 ORTHO05D005721 1.9e-25 120.9 174 44.3
Zm00001eb215650 Zea mays HOM05D004812 ORTHO05D005721 2.5e-25 120.6 180 40.0
AT4G07990 Arabidopsis thaliana HOM05D004812 ORTHO05D005721 5.5e-25 119.4 187 43.3
Carub.0006s2656 Capsella rubella HOM05D004812 ORTHO05D005721 5.5e-25 119.4 133 49.6
Lsat_1_v5_gn_9_79341 Lactuca sativa HOM05D004812 ORTHO05D005721 4.6e-24 116.3 156 44.9
BolC3t15691H Brassica oleracea HOM05D004812 ORTHO05D005721 5.1e-23 112.8 186 43.0
A03p27930 Brassica napus HOM05D004812 ORTHO05D005721 1.1e-22 111.7 186 42.5
BraA03t12006Z Brassica rapa HOM05D004812 ORTHO05D005721 1.1e-22 111.7 186 42.5
arahy.Tifrunner.gnm1.ann1.FJ07HR Arachis hypogaea HOM05D004812 ORTHO05D005721 2.5e-22 110.5 86 64.0
Oeu038874.1 Olea europaea HOM05D004812 ORTHO05D005721 7.4e-22 109.0 105 55.2
PGR083G2836 Punica granatum HOM05D004812 ORTHO05D005721 6.3e-21 105.9 193 39.4
COL.COLO4_28448 Corchorus olitorius HOM05D004812 ORTHO05D005721 1.2e-19 101.7 88 58.0
Duzib041G0112 Durio zibethinus HOM05D004812 ORTHO05D005721 1.2e-19 101.7 87 59.8
Glyma.17G232245 Glycine max HOM05D004812 ORTHO05D005721 1.2e-19 101.7 99 58.6
ECA247G0897 Erigeron canadensis HOM05D004812 ORTHO05D005721 1.9e-17 94.4 132 44.7
CSS0032610 Camellia sinensis var. sinensis HOM05D020206 ORTHO05D000047 2.7e-16 90.5 128 48.4
HPP92_028656 Vanilla planifolia HOM05D004812 ORTHO05D005721 3.9e-15 86.7 134 41.8
Phvul.L001695 Phaseolus vulgaris HOM05D004812 ORTHO05D005721 2.0e-14 84.3 79 55.7
CSS0013220 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.7e-14 82.0 133 42.1
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 9.7e-14 82.0 152 42.1
CSS0005797 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.8e-13 80.5 110 46.4
CSS0045239 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.4e-12 77.4 173 34.7
Medtr3g103520 Medicago truncatula HOM05D004812 ORTHO05D005721 7.0e-12 75.9 120 42.5
CSS0026947 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.6e-11 73.9 115 43.5
Duzib041G0506 Durio zibethinus HOM05D004812 ORTHO05D005721 3.5e-11 73.6 70 58.6
Zm00001eb299310 Zea mays HOM05D004812 ORTHO05D005721 3.5e-11 73.6 167 33.5
CSS0005907 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.7e-11 72.4 177 34.5
HanXRQChr08g0231951 Helianthus annuus HOM05D004812 ORTHO05D005721 5.0e-10 69.7 71 49.3
CSS0024874 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.5e-10 68.9 158 33.5
CSS0008068 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.2e-09 65.9 158 32.9
CSS0028950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.6e-08 64.7 63 57.1
Glyma.14G121300 Glycine max HOM05D004812 ORTHO05D005721 4.7e-08 63.2 55 54.5
CSS0031115 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 6.1e-08 62.8 125 34.4
CSS0042765 Camellia sinensis var. sinensis HOM05D014314 ORTHO05D000047 6.1e-08 62.8 50 64.0
CSS0045508 Camellia sinensis var. sinensis HOM05D000230 ORTHO05D000176 6.1e-08 62.8 71 52.1
CSS0015611 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.8e-07 61.2 61 55.7
Os07g0124800 Oryza sativa ssp. japonica HOM05D004812 ORTHO05D005721 5.2e-07 59.7 164 31.1
AUR62034973 Chenopodium quinoa HOM05D004812 ORTHO05D005721 3.3e-06 57.0 35 71.4
HPP92_017696 Vanilla planifolia HOM05D004812 ORTHO05D005721 7.5e-06 55.8 101 38.6
CSS0009433 Camellia sinensis var. sinensis HOM05D030793 ORTHO05D013043 9.7e-06 55.5 50 56.0

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (17 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (2 genes)
Durio zibethinus (5 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (5 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (3 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (3 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (2 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (2 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (2 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings