Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012354 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 3.5e-100 368.2 180 100.0
CSS0042811 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 3.5e-100 368.2 180 100.0
GSVIVG01013027001 Vitis vinifera HOM05D006675 ORTHO05D008302 1.6e-89 332.8 180 87.8
Manes.01G194600 Manihot esculenta HOM05D006675 ORTHO05D008302 2.8e-89 332.0 180 87.2
CAN.G773.29 Capsicum annuum HOM05D006675 ORTHO05D008302 1.4e-88 329.7 180 86.1
Ciclev10002637m.g Citrus clementina HOM05D006675 ORTHO05D008302 1.4e-88 329.7 180 87.2
Potri.001G135700 Populus trichocarpa HOM05D006675 ORTHO05D008302 3.1e-88 328.6 180 86.1
Solyc08g076130.3 Solanum lycopersicum HOM05D006675 ORTHO05D008302 3.1e-88 328.6 180 86.1
Sopen08g024770 Solanum pennellii HOM05D006675 ORTHO05D008302 3.1e-88 328.6 180 86.1
CiPaw.12G069400 Carya illinoinensis HOM05D006675 ORTHO05D008302 4.0e-88 328.2 180 85.0
Duzib205G0370 Durio zibethinus HOM05D006675 ORTHO05D008302 4.0e-88 328.2 180 86.1
QL12p001835 Quercus lobata HOM05D006675 ORTHO05D008302 5.3e-88 327.8 179 85.5
PGSC0003DMG400003501 Solanum tuberosum HOM05D006675 ORTHO05D008302 5.3e-88 327.8 180 85.6
Aqoxy5G00552 Aquilegia oxysepala HOM05D006675 ORTHO05D008302 9.0e-88 327.0 180 88.3
Thecc.03G311400 Theobroma cacao HOM05D006675 ORTHO05D008302 9.0e-88 327.0 180 86.1
PGSC0003DMG400009297 Solanum tuberosum HOM05D006675 ORTHO05D008302 1.5e-87 326.2 180 85.6
COL.COLO4_16920 Corchorus olitorius HOM05D006675 ORTHO05D008302 2.6e-87 325.5 180 86.1
BraA01t01049Z Brassica rapa HOM05D006675 ORTHO05D008302 7.6e-87 323.9 180 83.3
RcHm_v2.0_Chr7g0212211 Rosa chinensis HOM05D006675 ORTHO05D008302 7.6e-87 323.9 180 84.4
BcaNung04023 Brassica carinata HOM05D006675 ORTHO05D008302 1.3e-86 323.2 180 83.9
FAN18G0120 Fragaria x ananassa HOM05D006675 ORTHO05D008302 1.3e-86 323.2 180 84.4
AT4G19003 Arabidopsis thaliana HOM05D006675 ORTHO05D008302 1.7e-86 322.8 180 83.9
TWI60G1033 Tripterygium wilfordii HOM05D006675 ORTHO05D008302 1.7e-86 322.8 180 82.8
MELO3C013816.2 Cucumis melo HOM05D006675 ORTHO05D008302 2.2e-86 322.4 180 84.4
DCAR_024956 Daucus carota HOM05D006675 ORTHO05D008302 2.2e-86 322.4 180 83.3
Sed0011153 Sechium edule HOM05D006675 ORTHO05D008302 2.2e-86 322.4 180 85.0
Cfa009033 Carpinus fangiana HOM05D006675 ORTHO05D008302 2.9e-86 322.0 180 83.9
Thhalv10026368m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 2.9e-86 322.0 180 83.3
Sp7g17730 Schrenkiella parvula HOM05D006675 ORTHO05D008302 2.9e-86 322.0 180 83.3
Sc10g0009260 Simmondsia chinensis HOM05D006675 ORTHO05D008302 2.9e-86 322.0 180 83.9
Atru.chr3.2397 Acer truncatum HOM05D006675 ORTHO05D008302 3.8e-86 321.6 180 86.1
CsaV3_3G001280 Cucumis sativus L. HOM05D006675 ORTHO05D008302 3.8e-86 321.6 180 83.9
FvH4_5g23270 Fragaria vesca HOM05D006675 ORTHO05D008302 3.8e-86 321.6 180 83.9
FAN18G2874 Fragaria x ananassa HOM05D006675 ORTHO05D008302 3.8e-86 321.6 180 83.9
Lj2g0021996 Lotus japonicus HOM05D006675 ORTHO05D008302 3.8e-86 321.6 180 82.8
VMungo1215G1847 Vigna mungo HOM05D006675 ORTHO05D008302 3.8e-86 321.6 180 83.3
Actinidia01330 Actinidia chinensis HOM05D006675 ORTHO05D008302 4.9e-86 321.2 165 92.1
BcaC09g51446 Brassica carinata HOM05D000169 ORTHO05D008302 4.9e-86 321.2 180 82.8
BolC1t01279H Brassica oleracea HOM05D000169 ORTHO05D000542 4.9e-86 321.2 180 82.8
PGR042G1238 Punica granatum HOM05D006675 ORTHO05D008302 4.9e-86 321.2 180 84.4
THA.LOC104806177 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 4.9e-86 321.2 180 82.8
Haze_12062 Corylus avellana HOM05D006675 ORTHO05D008302 6.4e-86 320.9 180 83.9
Lalb_Chr16g0380971 Lupinus albus HOM05D006675 ORTHO05D008302 6.4e-86 320.9 180 82.8
C01p13040 Brassica napus HOM05D000169 ORTHO05D000542 8.4e-86 320.5 180 82.8
Gohir.D03G176700 Gossypium hirsutum HOM05D006675 ORTHO05D008302 1.1e-85 320.1 180 83.9
Carub.0007s2216 Capsella rubella HOM05D006675 ORTHO05D008302 1.4e-85 319.7 180 83.3
Rhsim06G0208000 Rhododendron simsii HOM05D006675 ORTHO05D008302 1.4e-85 319.7 206 77.7
AL7G35150 Arabidopsis lyrata HOM05D006675 ORTHO05D008302 2.4e-85 318.9 180 83.3
Gohir.A03G000027 Gossypium hirsutum HOM05D006675 ORTHO05D008302 3.2e-85 318.5 180 83.3
CARHR225840 Cardamine hirsuta HOM05D006675 ORTHO05D008302 4.2e-85 318.2 180 82.2
THA.LOC104798450 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 4.2e-85 318.2 180 83.3
Phvul.002G134300 Phaseolus vulgaris HOM05D006675 ORTHO05D008302 5.5e-85 317.8 180 82.2
Prupe.4G182100 Prunus persica HOM05D006675 ORTHO05D008302 9.3e-85 317.0 181 82.9
CANSAT21G2314 Cannabis sativa HOM05D006675 ORTHO05D008302 1.2e-84 316.6 180 82.8
Cc08_g03740 Coffea canephora HOM05D006675 ORTHO05D008302 1.2e-84 316.6 180 82.8
Duzib068G1343 Durio zibethinus HOM05D006675 ORTHO05D008302 1.2e-84 316.6 180 83.3
MSTRG.1795 Avicennia marina HOM05D006675 ORTHO05D008302 1.6e-84 316.2 180 81.1
Aa31LG6G1700 Aethionema arabicum HOM05D006675 ORTHO05D008302 2.1e-84 315.8 181 81.8
Medtr5g028000 Medicago truncatula HOM05D006675 ORTHO05D008302 2.1e-84 315.8 180 81.7
Migut.E01322 Erythranthe guttata HOM05D006675 ORTHO05D008302 2.7e-84 315.5 180 81.7
Glyma.09G209600 Glycine max HOM05D006675 ORTHO05D008302 2.7e-84 315.5 180 81.7
PSO170G4469 Papaver somniferum HOM05D006675 ORTHO05D008302 3.0e-83 312.0 180 82.2
MD11G1243800 Malus domestica HOM05D006675 ORTHO05D008302 3.9e-83 311.6 181 81.2
Lj8A133G65 Lonicera japonica HOM05D006675 ORTHO05D008302 1.5e-82 309.7 199 75.9
ATR0796G253 Amborella trichopoda HOM05D006675 ORTHO05D008302 1.9e-82 309.3 180 81.1
SalBow8G0964 Salvia bowleyana HOM05D006675 ORTHO05D008302 1.9e-82 309.3 180 79.4
Glyma.01G011400 Glycine max HOM05D006675 ORTHO05D008302 4.3e-82 308.1 180 78.3
Nn1g09734 Nelumbo nucifera HOM05D006675 ORTHO05D008302 9.6e-82 307.0 180 81.7
HPP92_023365 Vanilla planifolia HOM05D006675 ORTHO05D008302 9.6e-82 307.0 180 81.1
PSO017G0801 Papaver somniferum HOM05D006675 ORTHO05D008302 3.7e-81 305.1 180 81.7
ECA233G1922 Erigeron canadensis HOM05D006675 ORTHO05D008302 2.4e-80 302.4 180 77.8
HanXRQChr12g0362191 Helianthus annuus HOM05D006675 ORTHO05D008302 2.4e-80 302.4 180 78.9
BcaNung06620 Brassica carinata HOM05D006675 ORTHO05D008302 7.6e-79 297.4 203 70.4
HanXRQChr14g0430781 Helianthus annuus HOM05D006675 ORTHO05D008302 1.7e-78 296.2 187 75.9
Peaxi162Scf00052g00336 Petunia axillaris HOM05D006675 ORTHO05D008302 4.2e-77 291.6 159 86.8
Oeu017091.1 Olea europaea HOM05D006675 ORTHO05D008302 9.3e-77 290.4 160 86.2
Zm00001eb157890 Zea mays HOM05D006675 ORTHO05D008302 9.3e-77 290.4 180 78.9
Dinv06918 Davidia involucrata HOM05D006675 ORTHO05D008302 2.7e-76 288.9 159 86.8
Eucgr.E01319 Eucalyptus grandis HOM05D006675 ORTHO05D008302 1.5e-74 283.1 174 77.0
Eucgr.E01313 Eucalyptus grandis HOM05D006675 ORTHO05D008302 3.3e-74 282.0 175 76.6
SGA_v2.0_scaffold8G04421 Striga asiatica HOM05D006675 ORTHO05D008302 5.7e-74 281.2 161 80.7
CDE02G0997 Ceratophyllum demersum HOM05D006675 ORTHO05D008302 7.4e-74 280.8 180 76.1
SEGI_13659 Sequoiadendron giganteum HOM05D006675 ORTHO05D008302 4.8e-73 278.1 177 73.4
AUR62007364 Chenopodium quinoa HOM05D006675 ORTHO05D008302 1.1e-72 276.9 160 80.6
Nitab4.5_0002897g0050 Nicotiana tabacum HOM05D006675 ORTHO05D008302 2.0e-71 272.7 180 73.9
Ca_25161_v3 Cicer arietinum L. HOM05D006675 ORTHO05D000003 4.5e-71 271.6 160 78.8
Mapoly0004s0185 Marchantia polymorpha HOM05D006675 ORTHO05D008302 4.5e-71 271.6 177 70.1
Lsat_1_v5_gn_9_15400 Lactuca sativa HOM05D006675 ORTHO05D008302 7.6e-71 270.8 156 82.1
Thhalv10015765m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 2.9e-70 268.9 167 76.0
unitig_61.g26418 Utricularia gibba HOM05D006675 ORTHO05D008302 1.1e-69 266.9 162 76.5
ClCG06G010630 Citrullus lanatus HOM05D006675 ORTHO05D008302 1.6e-68 263.1 172 75.6
EL10Ac5g11997 Beta vulgaris HOM05D006675 ORTHO05D008302 2.1e-68 262.7 164 75.6
Sabra01G0105000 Salix brachista HOM05D006675 ORTHO05D008302 7.9e-68 260.8 218 63.3
SMO364G0912 Selaginella moellendorffii HOM05D006675 ORTHO05D008302 1.0e-67 260.4 175 68.0
Dinv29017 Davidia involucrata HOM05D006675 ORTHO05D008302 1.6e-65 253.1 139 84.2
Gorai.003G186000 Gossypium raimondii HOM05D006675 ORTHO05D008302 3.7e-65 251.9 139 83.5
TPR.G19460 Trifolium pratense HOM05D006675 ORTHO05D008302 9.1e-64 247.3 143 79.7
Pp3c15_1420 Physcomitrium patens HOM05D006675 ORTHO05D008302 2.0e-63 246.1 175 64.0
Nitab4.5_0002188g0010 Nicotiana tabacum HOM05D006675 ORTHO05D008302 5.5e-61 238.0 181 69.1
CBR_g10842 Chara braunii HOM05D006675 ORTHO05D008302 4.4e-58 228.4 171 60.2
Psat6g005760 Pisum sativum HOM05D001533 ORTHO05D005122 9.4e-53 210.7 114 83.3
SGA_v2.0_scaffold8G04249 Striga asiatica HOM05D006675 ORTHO05D008302 2.6e-50 202.6 121 76.9
Cre02.g076400 Chlamydomonas reinhardtii HOM05D006675 ORTHO05D008302 4.8e-49 198.4 174 51.1
arahy.Tifrunner.gnm1.ann1.XR7VEH Arachis hypogaea HOM05D006675 ORTHO05D008302 2.4e-48 196.1 117 73.5
AagrBONN_evm.TU.Sc2ySwM_228.5837 Anthoceros agrestis HOM05D006675 ORTHO05D008302 3.8e-46 188.7 116 73.3
vmacro00263 Vaccinium macrocarpon HOM05D006675 ORTHO05D008302 3.3e-42 175.6 96 87.5
arahy.Tifrunner.gnm1.ann1.1JB7Z5 Arachis hypogaea HOM05D000001 ORTHO05D000003 4.4e-42 175.3 188 52.1
arahy.Tifrunner.gnm1.ann1.K4EES2 Arachis hypogaea HOM05D000001 ORTHO05D000003 4.4e-42 175.3 188 52.1
Os01g0658500 Oryza sativa ssp. japonica HOM05D006675 ORTHO05D008302 1.6e-39 166.8 93 80.6
Ah.12g055570 Amaranthus hybridus HOM05D000160 ORTHO05D008302 3.8e-38 162.2 115 72.2
Psat2g139880 Pisum sativum HOM05D006675 ORTHO05D008302 4.7e-36 155.2 91 79.1
PRCOL_00001914 Prasinoderma coloniale HOM05D006675 ORTHO05D008302 6.1e-36 154.8 176 44.3
MCO12G007 Micromonas commoda HOM05D006675 ORTHO05D008302 2.0e-34 149.8 174 39.7
arahy.Tifrunner.gnm1.ann1.DBHH8D Arachis hypogaea HOM05D006675 ORTHO05D008302 6.3e-33 144.8 116 58.6
Hma1.2p1_0803F.1_g220920 Hydrangea macrophylla HOM05D006675 ORTHO05D008302 2.9e-30 136.0 177 44.6
GSVIVG01009131001 Vitis vinifera HOM05D006675 ORTHO05D008302 1.2e-28 130.6 79 75.9
Actinidia29284 Actinidia chinensis HOM05D006675 ORTHO05D008302 4.9e-25 118.6 65 87.7
BcaB07g30589 Brassica carinata HOM05D006675 ORTHO05D008302 5.9e-23 111.7 99 59.6
CARHR288450 Cardamine hirsuta HOM05D006675 ORTHO05D008302 1.1e-21 107.5 71 64.8
BcaB06g29627 Brassica carinata HOM05D006675 ORTHO05D008302 8.0e-20 101.3 100 57.0
A01p11020 Brassica napus HOM05D006675 ORTHO05D008302 4.4e-18 95.5 56 83.9
Hund14383 Selenicereus undatus HOM05D006675 ORTHO05D008302 8.3e-17 91.3 56 76.8
Haze_08131 Corylus avellana HOM05D006675 ORTHO05D008302 1.7e-14 83.6 50 78.0
FAN13G1728 Fragaria x ananassa HOM05D006675 ORTHO05D008302 3.0e-14 82.8 46 80.4
Phvul.002G134150 Phaseolus vulgaris HOM05D006675 ORTHO05D008302 2.7e-07 59.7 57 54.4
Gohir.D12G043050 Gossypium hirsutum HOM05D006675 ORTHO05D008302 8.6e-06 54.7 38 65.8

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (5 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (0 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (3 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (1 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (2 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (2 genes)
Zea mays (1 genes)

Program Settings