Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042772 Camellia sinensis var. sinensis HOM05D004552 ORTHO05D005501 1.1e-111 406.8 220 100.0
CSS0033785 Camellia sinensis var. sinensis HOM05D004552 ORTHO05D005501 1.2e-86 323.6 228 82.0
Rhsim10G0168100 Rhododendron simsii HOM05D004552 ORTHO05D005501 1.9e-76 289.7 228 72.8
Actinidia19722 Actinidia chinensis HOM05D004552 ORTHO05D005501 2.5e-76 289.3 228 72.8
Rhsim11G0041500 Rhododendron simsii HOM05D004552 ORTHO05D005501 4.3e-76 288.5 228 72.4
Rhsim11G0041800 Rhododendron simsii HOM05D004552 ORTHO05D005501 5.7e-76 288.1 229 72.1
Dinv37242 Davidia involucrata HOM05D004552 ORTHO05D005501 1.6e-75 286.6 228 72.4
Oeu029550.1 Olea europaea HOM05D004552 ORTHO05D005501 1.8e-66 256.5 228 66.7
Oeu026072.1 Olea europaea HOM05D004552 ORTHO05D005501 5.3e-66 255.0 228 66.7
Cc00_g23990 Coffea canephora HOM05D004552 ORTHO05D005501 1.9e-63 246.5 228 64.5
Lsat_1_v5_gn_5_8941 Lactuca sativa HOM05D004552 ORTHO05D005501 4.6e-62 241.9 228 62.7
HanXRQChr05g0156781 Helianthus annuus HOM05D004552 ORTHO05D005501 1.3e-59 233.8 228 62.7
Nitab4.5_0008076g0010 Nicotiana tabacum HOM05D004552 ORTHO05D005501 2.8e-59 232.6 229 61.6
Nitab4.5_0001952g0150 Nicotiana tabacum HOM05D004552 ORTHO05D005501 1.8e-58 229.9 229 61.6
MSTRG.16520 Avicennia marina HOM05D004552 ORTHO05D005501 2.6e-57 226.1 228 60.5
ECA246G2681 Erigeron canadensis HOM05D003206 ORTHO05D005207 2.6e-57 226.1 230 63.0
Nitab4.5_0006780g0010 Nicotiana tabacum HOM05D004552 ORTHO05D005501 7.7e-57 224.6 229 60.3
Nitab4.5_0005206g0040 Nicotiana tabacum HOM05D004552 ORTHO05D005501 1.7e-56 223.4 229 60.7
CAN.G525.45 Capsicum annuum HOM05D004552 ORTHO05D005501 5.0e-56 221.9 230 59.6
AUR62025361 Chenopodium quinoa HOM05D004552 ORTHO05D005501 5.0e-56 221.9 228 59.6
Peaxi162Scf00569g00015 Petunia axillaris HOM05D004552 ORTHO05D005501 5.0e-56 221.9 229 60.7
Hund08942 Selenicereus undatus HOM05D004552 ORTHO05D005501 6.5e-56 221.5 229 57.6
TAR369G0596 Trochodendron aralioides HOM05D004552 ORTHO05D005501 1.4e-55 220.3 233 62.2
unitig_899.g15236 Utricularia gibba HOM05D004552 ORTHO05D005501 1.9e-55 219.9 228 58.3
AUR62028362 Chenopodium quinoa HOM05D004552 ORTHO05D005501 1.0e-53 214.2 228 58.3
DCAR_009290 Daucus carota HOM05D004552 ORTHO05D005501 1.0e-53 214.2 231 61.0
Migut.K00511 Erythranthe guttata HOM05D004552 ORTHO05D005501 1.0e-53 214.2 231 58.4
Haze_20666 Corylus avellana HOM05D004552 ORTHO05D005501 3.0e-53 212.6 229 61.6
Sed0010830 Sechium edule HOM05D004552 ORTHO05D005501 3.0e-53 212.6 224 58.0
Cfa017496 Carpinus fangiana HOM05D004552 ORTHO05D005501 3.9e-53 212.2 228 62.3
CiPaw.09G181100 Carya illinoinensis HOM05D004552 ORTHO05D005501 6.7e-53 211.5 227 60.4
SalBow4G1233 Salvia bowleyana HOM05D004552 ORTHO05D005501 6.7e-53 211.5 228 56.6
Sopen02g031920 Solanum pennellii HOM05D004552 ORTHO05D005501 1.1e-52 210.7 229 58.5
ClCG04G008790 Citrullus lanatus HOM05D004552 ORTHO05D005501 2.0e-52 209.9 226 57.1
Lalb_Chr05g0229841 Lupinus albus HOM05D004552 ORTHO05D005501 2.0e-52 209.9 224 60.7
TWI53G0358 Tripterygium wilfordii HOM05D004552 ORTHO05D005501 2.0e-52 209.9 235 61.3
EL10Ac7g16819 Beta vulgaris HOM05D004552 ORTHO05D005501 2.6e-52 209.5 228 57.5
Cc03_g15870 Coffea canephora HOM05D004552 ORTHO05D005501 3.3e-52 209.1 204 62.7
Ah.14g084480 Amaranthus hybridus HOM05D004552 ORTHO05D005501 4.4e-52 208.8 228 55.7
Solyc02g087180.4 Solanum lycopersicum HOM05D004552 ORTHO05D005501 9.7e-52 207.6 245 54.7
Atru.chr8.2543 Acer truncatum HOM05D004552 ORTHO05D005501 2.8e-51 206.1 252 53.2
Ciclev10011831m.g Citrus clementina HOM05D004552 ORTHO05D005501 2.8e-51 206.1 236 55.9
arahy.Tifrunner.gnm1.ann1.6MTV2V Arachis hypogaea HOM05D004552 ORTHO05D005501 1.1e-50 204.1 241 55.6
arahy.Tifrunner.gnm1.ann1.CZIV0N Arachis hypogaea HOM05D004552 ORTHO05D005501 1.1e-50 204.1 226 58.8
arahy.Tifrunner.gnm1.ann1.URH0Q0 Arachis hypogaea HOM05D004552 ORTHO05D005501 1.4e-50 203.8 239 56.5
ClCG10G016170 Citrullus lanatus HOM05D004552 ORTHO05D005501 1.4e-50 203.8 227 55.9
Solyc04g014240.1 Solanum lycopersicum HOM05D004552 ORTHO05D005501 1.4e-50 203.8 229 56.8
VMungo0251G2800 Vigna mungo HOM05D004552 ORTHO05D005501 1.4e-50 203.8 224 60.3
Sopen04g006350 Solanum pennellii HOM05D004552 ORTHO05D005501 1.8e-50 203.4 229 56.8
arahy.Tifrunner.gnm1.ann1.LN9G9C Arachis hypogaea HOM05D004552 ORTHO05D005501 5.3e-50 201.8 226 58.4
Glyma.08G287300 Glycine max HOM05D004552 ORTHO05D005501 5.3e-50 201.8 222 59.9
Thecc.05G052700 Theobroma cacao HOM05D004552 ORTHO05D005501 7.0e-50 201.4 231 55.4
PGR004G2024 Punica granatum HOM05D004552 ORTHO05D005501 1.6e-49 200.3 227 56.8
Phvul.003G261400 Phaseolus vulgaris HOM05D004552 ORTHO05D005501 2.6e-49 199.5 222 60.8
CsaV3_4G024350 Cucumis sativus L. HOM05D004552 ORTHO05D005501 4.5e-49 198.7 221 55.7
Ca_22379_v3 Cicer arietinum L. HOM05D004552 ORTHO05D005501 7.7e-49 198.0 225 58.2
Duzib106G1297 Durio zibethinus HOM05D004552 ORTHO05D005501 7.7e-49 198.0 225 56.4
Ca_19605_v3 Cicer arietinum L. HOM05D004552 ORTHO05D005501 6.5e-48 194.9 225 58.7
MELO3C014263.2 Cucumis melo HOM05D004552 ORTHO05D005501 1.5e-47 193.7 221 54.8
PSO210G6420 Papaver somniferum HOM05D004552 ORTHO05D005501 2.5e-47 193.0 238 52.5
CAN.G206.55 Capsicum annuum HOM05D004552 ORTHO05D005501 3.2e-47 192.6 228 55.3
Lj3g0026232 Lotus japonicus HOM05D004552 ORTHO05D005501 5.5e-47 191.8 224 55.8
Lj5g0019559 Lotus japonicus HOM05D004552 ORTHO05D005501 5.5e-47 191.8 224 55.8
DCAR_002493 Daucus carota HOM05D004552 ORTHO05D005501 7.2e-47 191.4 231 55.4
RcHm_v2.0_Chr1g0361081 Rosa chinensis HOM05D004552 ORTHO05D005501 1.2e-46 190.7 222 56.3
Medtr8g075790 Medicago truncatula HOM05D004552 ORTHO05D005501 2.1e-46 189.9 226 58.8
Medtr6g089780 Medicago truncatula HOM05D004552 ORTHO05D005501 3.6e-46 189.1 225 56.0
CANSAT56G3582 Cannabis sativa HOM05D004552 ORTHO05D005501 4.7e-46 188.7 235 54.9
Manes.09G079900 Manihot esculenta HOM05D004552 ORTHO05D005501 4.7e-46 188.7 224 55.4
RcHm_v2.0_Chr1g0360161 Rosa chinensis HOM05D004552 ORTHO05D005501 4.7e-46 188.7 217 57.1
Glyma.06G188800 Glycine max HOM05D004552 ORTHO05D005501 1.4e-45 187.2 222 57.2
Psat7g019080 Pisum sativum HOM05D004552 ORTHO05D005501 2.3e-45 186.4 225 58.2
PSO832G0086 Papaver somniferum HOM05D004552 ORTHO05D005501 3.0e-45 186.0 239 51.5
Prupe.2G197600 Prunus persica HOM05D004552 ORTHO05D005501 3.0e-45 186.0 212 58.0
TPR.G27980 Trifolium pratense HOM05D004552 ORTHO05D005501 3.0e-45 186.0 223 56.5
Glyma.13G067700 Glycine max HOM05D004552 ORTHO05D005501 4.0e-45 185.7 222 56.3
Lj4g0012826 Lotus japonicus HOM05D004552 ORTHO05D005501 5.2e-45 185.3 224 54.9
QL07p045485 Quercus lobata HOM05D004552 ORTHO05D005501 5.2e-45 185.3 236 54.7
Aqoxy4G02198 Aquilegia oxysepala HOM05D004552 ORTHO05D005501 2.0e-44 183.3 243 52.3
COL.COLO4_27097 Corchorus olitorius HOM05D004552 ORTHO05D005501 2.0e-44 183.3 135 74.1
THA.LOC104823245 Tarenaya hassleriana HOM05D004552 ORTHO05D005501 2.0e-44 183.3 245 49.8
FvH4_7g17650 Fragaria vesca HOM05D004552 ORTHO05D005501 5.7e-44 181.8 218 55.0
Manes.08G002200 Manihot esculenta HOM05D004552 ORTHO05D005501 5.7e-44 181.8 227 53.3
TPR.G33503 Trifolium pratense HOM05D004552 ORTHO05D005501 1.4e-42 177.2 225 53.8
Nn1g07079 Nelumbo nucifera HOM05D004552 ORTHO05D005501 1.8e-42 176.8 246 51.6
Sc07g0006230 Simmondsia chinensis HOM05D004552 ORTHO05D005501 3.1e-42 176.0 231 49.4
Aa31LG1G22060 Aethionema arabicum HOM05D004552 ORTHO05D005501 1.6e-41 173.7 251 48.6
FAN03G1811 Fragaria x ananassa HOM05D004552 ORTHO05D005501 2.2e-40 169.9 218 52.8
FAN06G0991 Fragaria x ananassa HOM05D004552 ORTHO05D005501 2.2e-40 169.9 218 51.4
AT5G02850 Arabidopsis thaliana HOM05D004552 ORTHO05D005501 5.0e-40 168.7 247 48.6
vmacro04719 Vaccinium macrocarpon HOM05D004552 ORTHO05D005501 5.0e-40 168.7 151 64.2
PGSC0003DMG400000510 Solanum tuberosum HOM05D004552 ORTHO05D005501 1.1e-39 167.5 132 68.9
Gohir.A03G063400 Gossypium hirsutum HOM05D004552 ORTHO05D005501 1.5e-39 167.2 169 56.8
FvH4_7g16920 Fragaria vesca HOM05D004552 ORTHO05D005501 1.9e-39 166.8 223 52.5
FAN06G3324 Fragaria x ananassa HOM05D004552 ORTHO05D005501 1.9e-39 166.8 223 52.5
FAN06G4506 Fragaria x ananassa HOM05D004552 ORTHO05D005501 1.9e-39 166.8 223 52.5
Potri.016G084200 Populus trichocarpa HOM05D004552 ORTHO05D005501 1.9e-39 166.8 225 50.2
arahy.Tifrunner.gnm1.ann1.52IM1F Arachis hypogaea HOM05D004552 ORTHO05D005501 4.2e-39 165.6 151 65.6
FAN03G3426 Fragaria x ananassa HOM05D004552 ORTHO05D005501 4.2e-39 165.6 228 51.8
Manes.09G080009 Manihot esculenta HOM05D004552 ORTHO05D005501 7.2e-39 164.9 131 69.5
AL6G12120 Arabidopsis lyrata HOM05D004552 ORTHO05D005501 1.2e-38 164.1 248 47.6
CDE04G3741 Ceratophyllum demersum HOM05D004552 ORTHO05D005501 1.2e-38 164.1 233 51.1
FAN01G0370 Fragaria x ananassa HOM05D004552 ORTHO05D005501 1.2e-38 164.1 231 50.2
Sp6g39730 Schrenkiella parvula HOM05D004552 ORTHO05D005501 1.6e-38 163.7 249 47.0
Lj6g0014683 Lotus japonicus HOM05D004552 ORTHO05D005501 2.7e-38 162.9 212 51.9
Gohir.D03G102900 Gossypium hirsutum HOM05D004552 ORTHO05D005501 3.6e-38 162.5 169 56.8
Gorai.003G108400 Gossypium raimondii HOM05D004552 ORTHO05D005501 3.6e-38 162.5 169 56.8
C09p73810 Brassica napus HOM05D004552 ORTHO05D005501 4.7e-38 162.2 245 46.1
BolC9t60115H Brassica oleracea HOM05D004552 ORTHO05D005501 4.7e-38 162.2 245 46.1
BcaC06g32015 Brassica carinata HOM05D004552 ORTHO05D005501 6.1e-38 161.8 244 45.9
Thhalv10013588m.g Eutrema salsugineum HOM05D004552 ORTHO05D005501 1.8e-37 160.2 254 45.3
SGA_v2.0_scaffold204G41624 Striga asiatica HOM05D004552 ORTHO05D005501 2.3e-37 159.8 211 52.6
CARHR210480 Cardamine hirsuta HOM05D004552 ORTHO05D005501 3.0e-37 159.5 249 45.0
Lj6g0002066 Lotus japonicus HOM05D004552 ORTHO05D005501 5.2e-37 158.7 210 51.9
Carub.0006s0165 Capsella rubella HOM05D004552 ORTHO05D005501 6.8e-37 158.3 252 44.0
Psat4g100360 Pisum sativum HOM05D004552 ORTHO05D005501 3.7e-35 152.5 156 62.8
A10p32880 Brassica napus HOM05D004552 ORTHO05D005501 1.8e-34 150.2 245 44.1
THA.LOC104827455 Tarenaya hassleriana HOM05D004552 ORTHO05D005501 4.1e-34 149.1 214 48.6
FAN01G0473 Fragaria x ananassa HOM05D004552 ORTHO05D005501 2.7e-33 146.4 194 51.5
PSO675G1725 Papaver somniferum HOM05D004552 ORTHO05D005501 4.5e-33 145.6 164 53.7
PGSC0003DMG400023633 Solanum tuberosum HOM05D004552 ORTHO05D005501 7.7e-33 144.8 202 48.5
SHI12593 Sapria himalayana HOM05D004552 ORTHO05D005501 5.0e-32 142.1 216 49.5
MBI18_g25517_MAGBIO Magnolia biondii HOM05D004552 ORTHO05D005501 7.2e-31 138.3 156 54.5
Eucgr.J03059 Eucalyptus grandis HOM05D004552 ORTHO05D005501 1.6e-30 137.1 256 41.0
Sabra16G0091200 Salix brachista HOM05D004552 ORTHO05D005501 1.6e-30 137.1 133 60.2
Lj6g0013650 Lotus japonicus HOM05D004552 ORTHO05D005501 7.5e-28 128.3 212 44.8
Zm00001eb103820 Zea mays HOM05D004552 ORTHO05D005501 7.5e-28 128.3 229 44.5
HPP92_012944 Vanilla planifolia HOM05D004552 ORTHO05D005501 9.8e-28 127.9 232 42.7
Os09g0540500 Oryza sativa ssp. japonica HOM05D004552 ORTHO05D005501 1.7e-27 127.1 236 43.2
Lsat_1_v5_gn_8_95200 Lactuca sativa HOM05D004552 ORTHO05D005501 5.4e-26 122.1 84 73.8
SGA_v2.0_scaffold94G28661 Striga asiatica HOM05D004552 ORTHO05D005501 1.3e-24 117.5 149 52.3
ATR0594G066 Amborella trichopoda HOM05D004552 ORTHO05D005501 6.1e-22 108.6 185 44.3
C03p01200 Brassica napus HOM05D004552 ORTHO05D005501 1.5e-20 104.0 83 67.5
BolC3t12680H Brassica oleracea HOM05D004552 ORTHO05D005501 1.5e-20 104.0 83 67.5
ATR0950G002 Amborella trichopoda HOM05D004552 ORTHO05D005501 2.6e-20 103.2 185 43.8
VMungo0647G0506 Vigna mungo HOM05D004552 ORTHO05D005501 5.7e-20 102.1 105 61.9
A03p00930 Brassica napus HOM05D004552 ORTHO05D005501 1.7e-19 100.5 119 55.5
RhsimUnG0119000 Rhododendron simsii HOM05D004552 ORTHO05D005501 1.8e-18 97.1 59 79.7
Lsat_1_v5_gn_8_95180 Lactuca sativa HOM05D004552 ORTHO05D005501 1.1e-15 87.8 69 71.0
Actinidia11233 Actinidia chinensis HOM05D004552 ORTHO05D005501 1.9e-15 87.0 74 67.6
CDE07G0444 Ceratophyllum demersum HOM05D004552 ORTHO05D005501 9.5e-15 84.7 129 45.7
BcaB01g05872 Brassica carinata HOM05D004552 ORTHO05D005501 6.2e-14 82.0 243 34.2
SEGI_01207 Sequoiadendron giganteum HOM05D004552 ORTHO05D005501 2.3e-13 80.1 205 32.7
Mapoly0007s0084 Marchantia polymorpha HOM05D004552 ORTHO05D005501 4.9e-11 72.4 106 35.8
SEGI_11500 Sequoiadendron giganteum HOM05D004552 ORTHO05D005501 1.0e-08 64.7 131 36.6
FAN14G1867 Fragaria x ananassa HOM05D004552 ORTHO05D005501 2.3e-08 63.5 65 53.8
FvH4_6g20640 Fragaria vesca HOM05D004552 ORTHO05D005501 1.9e-07 60.5 65 52.3
Pp3c14_11490 Physcomitrium patens HOM05D004552 ORTHO05D005501 4.7e-06 55.8 140 29.3

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (2 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (5 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (2 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (3 genes)
Fragaria x ananassa (8 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (3 genes)
Lonicera japonica (0 genes)
Lotus japonicus (6 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (0 genes)
Manihot esculenta (3 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (4 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (3 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (4 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (0 genes)
Zea mays (1 genes)

Program Settings