Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042510 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 7.0e-156 553.9 280 100.0
CSS0002926 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 8.6e-154 547.0 280 98.9
CSS0039738 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 1.4e-151 539.7 289 95.5
CSS0044059 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 1.7e-149 532.7 269 99.6
vmacro12300 Vaccinium macrocarpon HOM05D001108 ORTHO05D005418 2.2e-117 426.0 279 78.1
Rhsim06G0142500 Rhododendron simsii HOM05D001108 ORTHO05D005418 2.5e-108 396.0 280 76.4
Haze_21052 Corylus avellana HOM05D001108 ORTHO05D001619 1.4e-103 380.2 280 71.1
HanXRQChr06g0171321 Helianthus annuus HOM05D001108 ORTHO05D005418 3.8e-101 372.1 283 71.4
TAR627G0387 Trochodendron aralioides HOM05D001108 ORTHO05D005418 4.9e-101 371.7 281 69.8
QL08p038694 Quercus lobata HOM05D001108 ORTHO05D005418 2.5e-100 369.4 281 70.8
CAN.G248.33 Capsicum annuum HOM05D001108 ORTHO05D005418 2.7e-99 365.9 280 69.6
Ciclev10013903m.g Citrus clementina HOM05D001108 ORTHO05D005418 6.1e-99 364.8 259 72.2
Solyc07g054190.4 Solanum lycopersicum HOM05D001108 ORTHO05D005418 2.3e-98 362.8 274 70.4
EL10Ac9g20764 Beta vulgaris HOM05D001108 ORTHO05D005418 5.1e-98 361.7 277 67.1
Sopen07g028120 Solanum pennellii HOM05D001108 ORTHO05D005418 8.7e-98 360.9 278 70.5
Cpa.g.sc34.160 Carica papaya HOM05D001108 ORTHO05D005418 9.7e-97 357.5 271 70.1
Atru.chr6.2997 Acer truncatum HOM05D001108 ORTHO05D005418 1.3e-96 357.1 280 70.7
HanXRQChr06g0171311 Helianthus annuus HOM05D001108 ORTHO05D005418 1.6e-96 356.7 282 67.7
Hund07929 Selenicereus undatus HOM05D001108 ORTHO05D005418 1.6e-96 356.7 268 68.3
MD09G1247800 Malus domestica HOM05D001108 ORTHO05D005418 2.8e-96 355.9 270 68.5
Lsat_1_v5_gn_4_70021 Lactuca sativa HOM05D001108 ORTHO05D005418 4.8e-96 355.1 255 71.4
TWI75G0959 Tripterygium wilfordii HOM05D001108 ORTHO05D005418 8.2e-96 354.4 288 65.6
Thecc.05G172000 Theobroma cacao HOM05D001108 ORTHO05D005418 1.8e-95 353.2 279 67.7
Ah.01g015170 Amaranthus hybridus HOM05D001108 ORTHO05D005418 3.1e-95 352.4 226 78.3
Nitab4.5_0000512g0050 Nicotiana tabacum HOM05D001108 ORTHO05D005418 3.1e-95 352.4 279 67.0
CiPaw.04G125800 Carya illinoinensis HOM05D001108 ORTHO05D005418 9.0e-95 350.9 278 68.0
Nn1g04079 Nelumbo nucifera HOM05D001108 ORTHO05D005418 9.0e-95 350.9 213 82.2
Sc21g0002830 Simmondsia chinensis HOM05D001108 ORTHO05D005418 9.0e-95 350.9 245 72.7
Prupe.3G137500 Prunus persica HOM05D001108 ORTHO05D005418 1.5e-94 350.1 277 66.1
AUR62019549 Chenopodium quinoa HOM05D001108 ORTHO05D005418 2.6e-94 349.4 275 65.1
PSO675G3815 Papaver somniferum HOM05D001108 ORTHO05D005418 2.6e-94 349.4 280 66.1
PSO541G4613 Papaver somniferum HOM05D001108 ORTHO05D005418 4.5e-94 348.6 280 65.7
COL.COLO4_33977 Corchorus olitorius HOM05D001108 ORTHO05D005418 5.9e-94 348.2 279 67.0
Nitab4.5_0004071g0020 Nicotiana tabacum HOM05D001108 ORTHO05D005418 5.9e-94 348.2 223 77.6
Gohir.A09G128300 Gossypium hirsutum HOM05D001108 ORTHO05D005418 7.7e-94 347.8 257 69.6
PSO478G1555 Papaver somniferum HOM05D001108 ORTHO05D005418 7.7e-94 347.8 280 66.4
Lsat_1_v5_gn_3_37280 Lactuca sativa HOM05D001108 ORTHO05D005418 2.2e-93 346.3 275 67.6
CANSAT80G2367 Cannabis sativa HOM05D001108 ORTHO05D005418 2.9e-93 345.9 275 66.9
Migut.C01348 Erythranthe guttata HOM05D001108 ORTHO05D005418 3.8e-93 345.5 252 73.4
PSO782G4551 Papaver somniferum HOM05D001108 ORTHO05D005418 6.5e-93 344.7 280 66.1
AUR62036092 Chenopodium quinoa HOM05D001108 ORTHO05D005418 1.9e-92 343.2 265 65.3
Gohir.D09G124300 Gossypium hirsutum HOM05D001108 ORTHO05D005418 1.9e-92 343.2 257 69.3
EL10Ac4g08320 Beta vulgaris HOM05D001108 ORTHO05D005418 7.2e-92 341.3 247 68.8
MD17G1240700 Malus domestica HOM05D001108 ORTHO05D005418 7.2e-92 341.3 230 74.8
Duzib093G1006 Durio zibethinus HOM05D001108 ORTHO05D005418 9.4e-92 340.9 258 70.5
Gorai.006G143100 Gossypium raimondii HOM05D001108 ORTHO05D005418 1.2e-91 340.5 257 68.9
CAN.G248.11 Capsicum annuum HOM05D001108 ORTHO05D005418 6.1e-91 338.2 207 79.2
Lalb_Chr03g0029441 Lupinus albus HOM05D001108 ORTHO05D005418 7.9e-91 337.8 267 66.3
Manes.13G146800 Manihot esculenta HOM05D001108 ORTHO05D005418 7.9e-91 337.8 281 66.2
Peaxi162Scf00132g00233 Petunia axillaris HOM05D001229 ORTHO05D005418 1.4e-90 337.0 262 67.9
MSTRG.5628 Avicennia marina HOM05D001108 ORTHO05D005418 1.8e-90 336.7 276 66.3
Potri.019G100500 Populus trichocarpa HOM05D001108 ORTHO05D005418 6.7e-90 334.7 282 63.8
SalBow1G0161 Salvia bowleyana HOM05D001108 ORTHO05D005418 8.8e-90 334.3 282 64.5
VMungo1127G1775 Vigna mungo HOM05D001108 ORTHO05D005418 1.1e-89 334.0 270 66.7
Sabra19G0110800 Salix brachista HOM05D001108 ORTHO05D005418 1.7e-88 330.1 284 64.1
Sabra19G0112200 Salix brachista HOM05D001108 ORTHO05D005418 1.7e-88 330.1 284 64.1
Nn1g06569 Nelumbo nucifera HOM05D001108 ORTHO05D005418 3.7e-88 328.9 228 73.7
Potri.013G131800 Populus trichocarpa HOM05D001108 ORTHO05D005418 4.8e-88 328.6 269 66.9
RcHm_v2.0_Chr7g0232111 Rosa chinensis HOM05D001108 ORTHO05D005418 4.8e-88 328.6 280 64.3
DCAR_013007 Daucus carota HOM05D001108 ORTHO05D005418 8.2e-88 327.8 200 81.5
Cpa.g.sc34.159 Carica papaya HOM05D001108 ORTHO05D005418 1.1e-87 327.4 271 62.4
Ca_20056_v3 Cicer arietinum L. HOM05D001108 ORTHO05D005418 2.4e-87 326.2 246 69.5
Cc05_g07130 Coffea canephora HOM05D001108 ORTHO05D005418 4.1e-87 325.5 199 81.4
unitig_60.g25406 Utricularia gibba HOM05D001108 ORTHO05D005418 4.1e-87 325.5 282 64.2
Lj3g0011439 Lotus japonicus HOM05D001108 ORTHO05D005418 5.3e-87 325.1 244 68.4
ClCG02G017630 Citrullus lanatus HOM05D001108 ORTHO05D005418 9.1e-87 324.3 274 63.9
Medtr0004s0220 Medicago truncatula HOM05D001108 ORTHO05D005418 2.6e-86 322.8 240 69.2
PGSC0003DMG400018350 Solanum tuberosum HOM05D001108 ORTHO05D005418 4.5e-86 322.0 199 80.4
Cfa017142 Carpinus fangiana HOM05D001108 ORTHO05D005418 7.7e-86 321.2 199 80.9
AUR62002952 Chenopodium quinoa HOM05D001108 ORTHO05D005418 1.7e-85 320.1 235 71.1
Haze_13157 Corylus avellana HOM05D001108 ORTHO05D005418 2.2e-85 319.7 199 80.9
FvH4_5g33380 Fragaria vesca HOM05D001108 ORTHO05D005418 2.2e-85 319.7 263 65.8
Sed0006413 Sechium edule HOM05D001108 ORTHO05D005418 2.2e-85 319.7 272 64.0
CsaV3_6G012940 Cucumis sativus L. HOM05D001108 ORTHO05D005418 2.9e-85 319.3 274 62.8
FAN04G2154 Fragaria x ananassa HOM05D001108 ORTHO05D005418 2.9e-85 319.3 263 65.8
PGR142G4253 Punica granatum HOM05D001108 ORTHO05D005418 3.8e-85 318.9 276 64.1
Eucgr.K01017 Eucalyptus grandis HOM05D001108 ORTHO05D005418 5.0e-85 318.5 248 69.4
FAN18G0425 Fragaria x ananassa HOM05D001108 ORTHO05D005418 5.0e-85 318.5 272 65.1
Sabra13G0111300 Salix brachista HOM05D001108 ORTHO05D005418 5.0e-85 318.5 267 65.9
CsaV3_6G013000 Cucumis sativus L. HOM05D001108 ORTHO05D005418 1.4e-84 317.0 274 62.4
Phvul.011G114100 Phaseolus vulgaris HOM05D001108 ORTHO05D005418 1.4e-84 317.0 270 63.7
HPP92_003131 Vanilla planifolia HOM05D001108 ORTHO05D005418 1.4e-84 317.0 233 68.7
Aqoxy1G02437 Aquilegia oxysepala HOM05D001108 ORTHO05D005418 3.2e-84 315.8 272 62.1
Glyma.12G112900 Glycine max HOM05D001108 ORTHO05D005418 3.2e-84 315.8 205 78.0
THA.LOC104824701 Tarenaya hassleriana HOM05D001108 ORTHO05D005418 4.2e-84 315.5 210 77.6
ECA246G0340 Erigeron canadensis HOM05D001108 ORTHO05D005418 7.2e-84 314.7 200 77.5
arahy.Tifrunner.gnm1.ann1.85LIYI Arachis hypogaea HOM05D001108 ORTHO05D005418 2.1e-83 313.2 274 64.2
CARHR111330 Cardamine hirsuta HOM05D001108 ORTHO05D005418 2.1e-83 313.2 255 64.7
Medtr1g066930 Medicago truncatula HOM05D001108 ORTHO05D005418 2.1e-83 313.2 249 65.5
AT2G20690 Arabidopsis thaliana HOM05D001108 ORTHO05D005418 6.1e-83 311.6 216 72.7
Thhalv10002078m.g Eutrema salsugineum HOM05D001108 ORTHO05D005418 6.1e-83 311.6 246 68.3
BcaB03g16863 Brassica carinata HOM05D001108 ORTHO05D005418 1.4e-82 310.5 214 75.2
Carub.0003s3520 Capsella rubella HOM05D001108 ORTHO05D005418 1.8e-82 310.1 216 73.6
SGA_v2.0_scaffold92G28314 Striga asiatica HOM05D001108 ORTHO05D005418 3.0e-82 309.3 288 60.4
arahy.Tifrunner.gnm1.ann1.SGC5R3 Arachis hypogaea HOM05D001108 ORTHO05D005418 5.1e-82 308.5 279 64.2
Aqoxy1G02436 Aquilegia oxysepala HOM05D001108 ORTHO05D005418 6.7e-82 308.1 182 85.7
arahy.Tifrunner.gnm1.ann1.PPEG78 Arachis hypogaea HOM05D001108 ORTHO05D005418 6.7e-82 308.1 277 63.5
C07p00210 Brassica napus HOM05D001108 ORTHO05D005418 6.7e-82 308.1 201 78.6
A07p00070 Brassica napus HOM05D001108 ORTHO05D005418 1.1e-81 307.4 245 69.0
AUR62007757 Chenopodium quinoa HOM05D001108 ORTHO05D005418 1.5e-81 307.0 227 70.5
Dinv26419 Davidia involucrata HOM05D001108 ORTHO05D005418 1.5e-81 307.0 196 79.1
SEGI_26411 Sequoiadendron giganteum HOM05D001108 ORTHO05D005418 2.6e-81 306.2 202 77.2
arahy.Tifrunner.gnm1.ann1.S0UG05 Arachis hypogaea HOM05D001108 ORTHO05D005418 3.3e-81 305.8 274 63.9
BcaC06g36761 Brassica carinata HOM05D001108 ORTHO05D005418 3.3e-81 305.8 201 78.1
BolC7t40471H Brassica oleracea HOM05D001108 ORTHO05D005418 3.3e-81 305.8 201 78.1
BraA07t27798Z Brassica rapa HOM05D001108 ORTHO05D005418 7.4e-81 304.7 245 68.6
AL3G53780 Arabidopsis lyrata HOM05D001108 ORTHO05D005418 9.7e-81 304.3 204 76.0
Dinv23643 Davidia involucrata HOM05D001108 ORTHO05D005418 9.7e-81 304.3 177 85.9
Lj1P722T15 Lonicera japonica HOM05D001108 ORTHO05D005418 4.8e-80 302.0 183 85.2
Sp3g33940 Schrenkiella parvula HOM05D001108 ORTHO05D005418 2.6e-78 296.2 193 78.2
CDE02G0464 Ceratophyllum demersum HOM05D001108 ORTHO05D005418 5.9e-78 295.0 193 75.1
Pp3c2_19260 Physcomitrium patens HOM05D001108 ORTHO05D005418 5.0e-77 292.0 221 68.3
MELO3C000760.2 Cucumis melo HOM05D001108 ORTHO05D005418 1.1e-76 290.8 220 68.2
AagrBONN_evm.TU.Sc2ySwM_228.5414 Anthoceros agrestis HOM05D001108 ORTHO05D005418 7.2e-76 288.1 202 71.8
Mapoly0026s0114 Marchantia polymorpha HOM05D001108 ORTHO05D005418 1.6e-75 287.0 202 69.8
Duzib128G0360 Durio zibethinus HOM05D001108 ORTHO05D005418 2.1e-75 286.6 242 64.5
SMO137G0361 Selaginella moellendorffii HOM05D001108 ORTHO05D005418 3.6e-75 285.8 207 69.6
CBR_g36747 Chara braunii HOM05D001108 ORTHO05D005418 2.3e-74 283.1 200 71.0
Actinidia11036 Actinidia chinensis HOM05D001108 ORTHO05D005418 6.3e-72 275.0 193 75.6
Ah.04g164360 Amaranthus hybridus HOM05D001108 ORTHO05D005418 8.2e-72 274.6 238 60.9
ATR1096G056 Amborella trichopoda HOM05D001108 ORTHO05D005418 2.4e-71 273.1 205 67.3
CDE09G0563 Ceratophyllum demersum HOM05D001108 ORTHO05D005418 1.0e-69 267.7 179 73.2
Zm00001eb410210 Zea mays HOM05D001108 ORTHO05D005418 4.7e-67 258.8 246 56.1
HanXRQChr06g0169711 Helianthus annuus HOM05D001108 ORTHO05D005418 8.0e-67 258.1 279 55.6
Zm00001eb410410 Zea mays HOM05D001108 ORTHO05D005418 1.4e-66 257.3 245 57.1
CAN.G248.16 Capsicum annuum HOM05D001108 ORTHO05D005418 3.4e-65 252.7 165 73.9
CAN.G851.1 Capsicum annuum HOM05D001108 ORTHO05D005418 3.4e-65 252.7 165 73.9
Sabra19G0110900 Salix brachista HOM05D001108 ORTHO05D005418 1.2e-62 244.2 259 56.4
Os12g0541000 Oryza sativa ssp. japonica HOM05D001108 ORTHO05D005418 5.9e-62 241.9 234 53.4
BcaC04g22783 Brassica carinata HOM05D001108 ORTHO05D005418 3.2e-60 236.1 221 60.6
MD09G1265300 Malus domestica HOM05D001108 ORTHO05D005418 1.4e-58 230.7 183 65.6
Psat4g001880 Pisum sativum HOM05D001108 ORTHO05D005418 4.1e-55 219.2 269 49.8
CANSAT80G2295 Cannabis sativa HOM05D001108 ORTHO05D005418 1.0e-50 204.5 131 74.8
C09p15330 Brassica napus HOM05D001108 ORTHO05D005418 3.0e-50 203.0 192 59.9
unitig_88.g27586 Utricularia gibba HOM05D001108 ORTHO05D005418 2.3e-45 186.8 111 82.0
Lsat_1_v5_gn_4_42240 Lactuca sativa HOM05D001108 ORTHO05D005418 1.2e-43 181.0 112 80.4
Pp3s30_1010 Physcomitrium patens HOM05D000723 ORTHO05D004839 1.6e-43 180.6 202 46.5
Cfa026241 Carpinus fangiana HOM05D001108 ORTHO05D005418 2.0e-41 173.7 178 51.1
HanXRQChr06g0169731 Helianthus annuus HOM05D001108 ORTHO05D005418 3.2e-39 166.4 93 86.0
CAN.G362.18 Capsicum annuum HOM05D001108 ORTHO05D005418 8.6e-37 158.3 217 47.0
Cfa014613 Carpinus fangiana HOM05D001108 ORTHO05D005418 2.0e-33 147.1 211 46.0
FAN08G2132 Fragaria x ananassa HOM05D001108 ORTHO05D005418 2.0e-33 147.1 88 79.5
unitig_88.g27587 Utricularia gibba HOM05D001108 ORTHO05D005418 8.9e-26 121.7 151 51.0
Cre06.g296600 Chlamydomonas reinhardtii HOM05D001108 ORTHO05D005418 1.5e-25 120.9 210 35.2
PRCOL_00001102 Prasinoderma coloniale HOM05D001108 ORTHO05D005418 1.5e-25 120.9 156 42.9
Psat5g098840 Pisum sativum HOM05D001108 ORTHO05D005418 1.3e-24 117.9 137 48.2
MCO11G757 Micromonas commoda HOM05D001108 ORTHO05D005418 2.2e-24 117.1 214 37.9
CAN.G248.14 Capsicum annuum HOM05D001108 ORTHO05D005418 2.4e-23 113.6 70 77.1
Ca_28725_v3 Cicer arietinum L. HOM05D001108 ORTHO05D005418 3.0e-21 106.7 205 35.1
AagrBONN_evm.TU.Sc2ySwM_228.459 Anthoceros agrestis HOM05D001108 ORTHO05D005418 4.3e-20 102.8 202 34.7
Psat5g097760 Pisum sativum HOM05D002292 ORTHO05D005418 3.6e-19 99.8 149 39.6
Lsat_1_v5_gn_8_150060 Lactuca sativa HOM05D001108 ORTHO05D005418 2.1e-14 84.0 65 61.5
Medtr4g063470 Medicago truncatula HOM05D001108 ORTHO05D005418 3.5e-14 83.2 66 60.6
RcHm_v2.0_Chr2g0153941 Rosa chinensis HOM05D001108 ORTHO05D005418 7.3e-12 75.5 113 45.1
BolC9t54441H Brassica oleracea HOM05D001108 ORTHO05D005418 9.9e-09 65.1 38 81.6
MBI06_g06479_MAGBIO Magnolia biondii HOM05D001108 ORTHO05D005418 2.9e-08 63.5 67 58.2
Psat0s773g0040 Pisum sativum HOM05D001108 ORTHO05D005418 2.1e-06 57.4 152 31.6

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (2 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (2 genes)
Brassica carinata (3 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (6 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (3 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (4 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (2 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (4 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (4 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (3 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (3 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (4 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (4 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (4 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (3 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (0 genes)
Zea mays (2 genes)

Program Settings