Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041271 Camellia sinensis var. sinensis HOM05D005315 ORTHO05D006589 3.5e-66 255.0 145 100.0
CSS0017761 Camellia sinensis var. sinensis HOM05D005315 ORTHO05D006589 9.5e-64 246.9 145 97.2
CSS0021362 Camellia sinensis var. sinensis HOM05D005315 ORTHO05D006589 5.8e-29 131.3 104 77.9
CSS0027333 Camellia sinensis var. sinensis HOM05D005315 ORTHO05D006589 5.8e-29 131.3 104 77.9
QL10p015953 Quercus lobata HOM05D005315 ORTHO05D006589 2.2e-20 102.8 104 63.5
arahy.Tifrunner.gnm1.ann1.NZ3ZKL Arachis hypogaea HOM05D005315 ORTHO05D006589 2.9e-20 102.4 105 61.0
arahy.Tifrunner.gnm1.ann1.EUG2WG Arachis hypogaea HOM05D005315 ORTHO05D006589 8.4e-20 100.9 105 60.0
CiPaw.07G101900 Carya illinoinensis HOM05D005315 ORTHO05D006589 3.2e-19 99.0 103 61.2
AUR62029964 Chenopodium quinoa HOM05D005315 ORTHO05D006589 5.5e-19 98.2 106 58.5
Rhsim13G0016000 Rhododendron simsii HOM05D005315 ORTHO05D006589 1.2e-18 97.1 106 64.2
Ciclev10021031m.g Citrus clementina HOM05D005315 ORTHO05D006589 1.6e-18 96.7 101 62.4
TWI59G0122 Tripterygium wilfordii HOM05D005315 ORTHO05D006589 2.7e-18 95.9 98 61.2
Manes.05G066800 Manihot esculenta HOM05D005315 ORTHO05D006589 3.5e-18 95.5 102 61.8
QL12p024404 Quercus lobata HOM05D005315 ORTHO05D006589 4.6e-18 95.1 104 59.6
EL10Ac1g00719 Beta vulgaris HOM05D005315 ORTHO05D006589 7.9e-18 94.4 105 60.0
PGR044G2036 Punica granatum HOM05D005315 ORTHO05D006589 7.9e-18 94.4 92 63.0
vmacro02497 Vaccinium macrocarpon HOM05D005315 ORTHO05D006589 1.0e-17 94.0 101 62.4
Ca_09122_v3 Cicer arietinum L. HOM05D005315 ORTHO05D006589 1.3e-17 93.6 105 60.0
Lj1g0005840 Lotus japonicus HOM05D005315 ORTHO05D006589 1.8e-17 93.2 105 59.0
Nitab4.5_0000431g0150 Nicotiana tabacum HOM05D005315 ORTHO05D006589 1.8e-17 93.2 105 60.0
DCAR_003965 Daucus carota HOM05D005315 ORTHO05D006589 2.3e-17 92.8 104 56.7
Manes.01G214900 Manihot esculenta HOM05D005315 ORTHO05D006589 3.0e-17 92.4 101 57.4
Duzib133G0389 Durio zibethinus HOM05D005315 ORTHO05D006589 3.9e-17 92.0 82 68.3
Potri.014G134100 Populus trichocarpa HOM05D005315 ORTHO05D006589 3.9e-17 92.0 104 59.6
AUR62002550 Chenopodium quinoa HOM05D005315 ORTHO05D006589 5.1e-17 91.7 106 54.7
Sed0018657 Sechium edule HOM05D005315 ORTHO05D006589 5.1e-17 91.7 120 50.8
RcHm_v2.0_Chr6g0292881 Rosa chinensis HOM05D005315 ORTHO05D006589 6.7e-17 91.3 100 61.0
EL10Ac3g06247 Beta vulgaris HOM05D005315 ORTHO05D006589 8.7e-17 90.9 106 57.5
Gohir.A08G116900 Gossypium hirsutum HOM05D005315 ORTHO05D006589 8.7e-17 90.9 100 58.0
Sabra14G0100000 Salix brachista HOM05D005315 ORTHO05D006589 8.7e-17 90.9 100 61.0
Hund18046 Selenicereus undatus HOM05D005315 ORTHO05D006589 1.1e-16 90.5 110 55.5
Gohir.D08G137700 Gossypium hirsutum HOM05D005315 ORTHO05D006589 1.9e-16 89.7 89 62.9
Prupe.2G090200 Prunus persica HOM05D005315 ORTHO05D006589 1.9e-16 89.7 96 62.5
Glyma.03G210300 Glycine max HOM05D005315 ORTHO05D006589 2.5e-16 89.4 105 59.0
VMungo1383G1398 Vigna mungo HOM05D005315 ORTHO05D006589 2.5e-16 89.4 105 58.1
Duzib138G1810 Durio zibethinus HOM05D005315 ORTHO05D006589 3.3e-16 89.0 90 63.3
FvH4_2g14201 Fragaria vesca HOM05D005315 ORTHO05D006589 3.3e-16 89.0 120 55.0
FAN20G2356 Fragaria x ananassa HOM05D005315 ORTHO05D006589 3.3e-16 89.0 92 62.0
FAN24G2129 Fragaria x ananassa HOM05D005315 ORTHO05D006589 3.3e-16 89.0 120 55.0
Sopen04g023370 Solanum pennellii HOM05D005315 ORTHO05D006589 3.3e-16 89.0 107 60.7
Gorai.004G141000 Gossypium raimondii HOM05D005315 ORTHO05D006589 4.3e-16 88.6 100 57.0
Lj6A760G44 Lonicera japonica HOM05D005315 ORTHO05D006589 4.3e-16 88.6 96 60.4
Psat3g025640 Pisum sativum HOM05D005315 ORTHO05D006589 5.7e-16 88.2 104 55.8
ATR0665G323 Amborella trichopoda HOM05D005315 ORTHO05D006589 7.4e-16 87.8 90 62.2
MD03G1278200 Malus domestica HOM05D005315 ORTHO05D006589 9.7e-16 87.4 84 65.5
Solyc04g053080.4 Solanum lycopersicum HOM05D005315 ORTHO05D006589 9.7e-16 87.4 107 57.9
Cfa006013 Carpinus fangiana HOM05D005315 ORTHO05D006589 1.3e-15 87.0 104 54.8
Atru.chr4.1184 Acer truncatum HOM05D005315 ORTHO05D006589 1.6e-15 86.7 104 56.7
Cc07_g16220 Coffea canephora HOM05D005315 ORTHO05D006589 2.2e-15 86.3 104 57.7
Eucgr.K03447 Eucalyptus grandis HOM05D005315 ORTHO05D006589 2.2e-15 86.3 104 54.8
Prupe.8G254400 Prunus persica HOM05D005315 ORTHO05D006589 2.2e-15 86.3 104 58.7
Glyma.19G207500 Glycine max HOM05D005315 ORTHO05D006589 2.8e-15 85.9 105 56.2
Nitab4.5_0013619g0010 Nicotiana tabacum HOM05D005315 ORTHO05D008125 2.8e-15 85.9 105 57.1
Peaxi162Scf01132g00228 Petunia axillaris HOM05D005315 ORTHO05D006589 2.8e-15 85.9 105 58.1
Phvul.001G203400 Phaseolus vulgaris HOM05D005315 ORTHO05D006589 2.8e-15 85.9 104 55.8
TPR.G32271 Trifolium pratense HOM05D005315 ORTHO05D006589 2.8e-15 85.9 105 54.3
Sed0022397 Sechium edule HOM05D005315 ORTHO05D006589 3.7e-15 85.5 104 51.9
Nitab4.5_0000492g0210 Nicotiana tabacum HOM05D005315 ORTHO05D006589 4.8e-15 85.1 105 58.1
GSVIVG01010986001 Vitis vinifera HOM05D005315 ORTHO05D006589 4.8e-15 85.1 104 57.7
Lalb_Chr04g0259741 Lupinus albus HOM05D005315 ORTHO05D006589 6.3e-15 84.7 101 56.4
Nitab4.5_0008505g0010 Nicotiana tabacum HOM05D005315 ORTHO05D006589 1.1e-14 84.0 89 61.8
CAN.G276.6 Capsicum annuum HOM05D005315 ORTHO05D006589 1.4e-14 83.6 107 57.9
MD11G1300200 Malus domestica HOM05D005315 ORTHO05D006589 1.4e-14 83.6 84 63.1
PSO170G6158 Papaver somniferum HOM05D005315 ORTHO05D006589 1.4e-14 83.6 100 57.0
PSO210G5824 Papaver somniferum HOM05D005315 ORTHO05D006589 1.4e-14 83.6 100 57.0
CANSAT25G3366 Cannabis sativa HOM05D005315 ORTHO05D006589 3.1e-14 82.4 103 55.3
Cpa.g.sc9.185 Carica papaya HOM05D005315 ORTHO05D006589 3.1e-14 82.4 104 53.8
Dinv33007 Davidia involucrata HOM05D005315 ORTHO05D006589 3.1e-14 82.4 75 66.7
Thecc.01G292600 Theobroma cacao HOM05D005315 ORTHO05D006589 3.1e-14 82.4 83 65.1
ATR0564G214 Amborella trichopoda HOM05D005315 ORTHO05D006589 4.1e-14 82.0 90 57.8
Nn1g09466 Nelumbo nucifera HOM05D005315 ORTHO05D006589 4.1e-14 82.0 107 50.5
Haze_04835 Corylus avellana HOM05D005315 ORTHO05D006589 5.3e-14 81.6 105 53.3
MELO3C016054.2 Cucumis melo HOM05D005315 ORTHO05D006589 5.3e-14 81.6 104 50.0
Sc24g0001270 Simmondsia chinensis HOM05D005315 ORTHO05D006589 5.3e-14 81.6 101 53.5
Medtr4g104580 Medicago truncatula HOM05D005315 ORTHO05D006589 9.0e-14 80.9 106 54.7
ClCG09G006320 Citrullus lanatus HOM05D005315 ORTHO05D006589 1.5e-13 80.1 104 50.0
Migut.B00780 Erythranthe guttata HOM05D005315 ORTHO05D006589 2.0e-13 79.7 98 54.1
SGA_v2.0_scaffold304G47908 Striga asiatica HOM05D005315 ORTHO05D006589 2.0e-13 79.7 89 58.4
Aqoxy2G03077 Aquilegia oxysepala HOM05D005315 ORTHO05D006589 2.2e-12 76.3 104 51.0
Oeu028371.1 Olea europaea HOM05D005315 ORTHO05D006589 2.9e-12 75.9 99 53.5
THA.LOC104802209 Tarenaya hassleriana HOM05D005315 ORTHO05D006589 2.9e-12 75.9 112 48.2
MSTRG.16494 Avicennia marina HOM05D005315 ORTHO05D006589 5.0e-12 75.1 104 51.9
unitig_26.g9038 Utricularia gibba HOM05D005315 ORTHO05D006589 5.0e-12 75.1 82 61.0
Hma1.2p1_0399F.1_g144060 Hydrangea macrophylla HOM05D005315 ORTHO05D006589 1.1e-11 73.9 61 68.9
BcaB02g07311 Brassica carinata HOM05D005315 ORTHO05D006589 1.4e-11 73.6 90 53.3
BcaB02g08087 Brassica carinata HOM05D005315 ORTHO05D006589 3.2e-11 72.4 90 53.3
COL.COLO4_08010 Corchorus olitorius HOM05D005315 ORTHO05D006589 4.2e-11 72.0 70 60.0
Thhalv10006094m.g Eutrema salsugineum HOM05D005315 ORTHO05D006589 4.2e-11 72.0 95 51.6
CARHR173230 Cardamine hirsuta HOM05D005315 ORTHO05D006589 5.5e-11 71.6 75 60.0
Carub.0005s2959 Capsella rubella HOM05D005315 ORTHO05D006589 2.7e-10 69.3 90 52.2
A09p54790 Brassica napus HOM05D005315 ORTHO05D006589 3.6e-10 68.9 85 52.9
BraA09t40888Z Brassica rapa HOM05D005315 ORTHO05D006589 3.6e-10 68.9 85 52.9
BcaC02g10325 Brassica carinata HOM05D005315 ORTHO05D006589 4.6e-10 68.6 75 57.3
C04p30300 Brassica napus HOM05D005315 ORTHO05D006589 4.6e-10 68.6 75 57.3
BolC4t24563H Brassica oleracea HOM05D005315 ORTHO05D006589 4.6e-10 68.6 75 57.3
CDE04G3078 Ceratophyllum demersum HOM05D005315 ORTHO05D006589 4.6e-10 68.6 96 47.9
C08p37650 Brassica napus HOM05D005315 ORTHO05D006589 6.1e-10 68.2 95 49.5
BolC8t51348H Brassica oleracea HOM05D005315 ORTHO05D006589 6.1e-10 68.2 95 49.5
SEGI_33648 Sequoiadendron giganteum HOM05D005315 ORTHO05D006589 6.1e-10 68.2 82 53.7
CsaV3_7G028820 Cucumis sativus L. HOM05D005315 ORTHO05D006589 1.0e-09 67.4 84 53.6
Sp5g00580 Schrenkiella parvula HOM05D005315 ORTHO05D006589 1.0e-09 67.4 95 49.5
PGSC0003DMG400016587 Solanum tuberosum HOM05D005315 ORTHO05D006589 1.0e-09 67.4 61 70.5
Aa31LG10G16750 Aethionema arabicum HOM05D005315 ORTHO05D006589 1.8e-09 66.6 97 48.5
Medtr7g108240 Medicago truncatula HOM05D005315 ORTHO05D006589 1.8e-09 66.6 71 57.7
A04p00430 Brassica napus HOM05D005315 ORTHO05D006589 2.3e-09 66.2 79 55.7
Zm00001eb212540 Zea mays HOM05D005315 ORTHO05D006589 2.3e-09 66.2 105 46.7
BraA04t15762Z Brassica rapa HOM05D005315 ORTHO05D006589 6.7e-09 64.7 79 54.4
HPP92_002250 Vanilla planifolia HOM05D005315 ORTHO05D006589 6.7e-09 64.7 104 43.3
AagrBONN_evm.TU.Sc2ySwM_228.5144 Anthoceros agrestis HOM05D005315 ORTHO05D006589 1.1e-08 63.9 67 58.2
AT3G62940 Arabidopsis thaliana HOM05D005315 ORTHO05D006589 1.5e-08 63.5 83 49.4
SMO196G0226 Selaginella moellendorffii HOM05D005315 ORTHO05D006589 1.5e-08 63.5 106 47.2
Mapoly0036s0154 Marchantia polymorpha HOM05D005315 ORTHO05D006589 3.3e-08 62.4 86 50.0
Pp3c15_4060 Physcomitrium patens HOM05D005315 ORTHO05D006589 3.3e-08 62.4 70 58.6
CSS0030535 Camellia sinensis var. sinensis HOM05D017684 ORTHO05D109798 1.3e-07 60.5 45 77.8
Lsat_1_v5_gn_5_90141 Lactuca sativa HOM05D005315 ORTHO05D006589 1.3e-07 60.5 49 63.3
CBR_g50012 Chara braunii HOM05D005315 ORTHO05D006589 1.7e-07 60.1 78 51.3
HanXRQChr12g0357681 Helianthus annuus HOM05D005315 ORTHO05D006589 2.2e-07 59.7 69 56.5
AL5G45720 Arabidopsis lyrata HOM05D005315 ORTHO05D006589 4.8e-07 58.5 84 51.2
arahy.Tifrunner.gnm1.ann1.UST23B Arachis hypogaea HOM05D005315 ORTHO05D006589 4.8e-07 58.5 54 64.8

Acer truncatum (1 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (2 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (3 genes)
Avicennia marina (1 genes)
Beta vulgaris (2 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (5 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (2 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (4 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings