Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040114 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 1.4e-193 679.5 341 100.0
CSS0014629 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 2.8e-130 469.2 433 64.9
CSS0006325 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 1.4e-129 466.8 433 64.7
CSS0046042 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 3.4e-128 462.2 430 64.2
Actinidia09998 Actinidia chinensis HOM05D004612 ORTHO05D004940 4.9e-111 405.2 428 57.9
CSS0003938 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 1.9e-107 393.3 399 61.7
GSVIVG01026844001 Vitis vinifera HOM05D004612 ORTHO05D004940 6.2e-106 388.3 425 55.3
Rhsim07G0018100 Rhododendron simsii HOM05D004612 ORTHO05D004940 8.1e-106 387.9 427 56.2
Hma1.2p1_0033F.1_g020400 Hydrangea macrophylla HOM05D004612 ORTHO05D004940 2.7e-101 372.9 425 53.9
Dinv32447 Davidia involucrata HOM05D004612 ORTHO05D004940 1.3e-100 370.5 407 55.8
Haze_15464 Corylus avellana HOM05D004612 ORTHO05D004940 3.9e-100 369.0 415 53.5
Cfa003958 Carpinus fangiana HOM05D004612 ORTHO05D004940 7.4e-99 364.8 415 53.0
QL08p049561 Quercus lobata HOM05D004612 ORTHO05D004940 9.6e-99 364.4 427 52.9
TAR629G0951 Trochodendron aralioides HOM05D004612 ORTHO05D004940 2.4e-97 359.8 430 52.3
Ciclev10024326m.g Citrus clementina HOM05D004612 ORTHO05D004940 1.0e-95 354.4 422 52.6
MD07G1141600 Malus domestica HOM05D004612 ORTHO05D004940 6.5e-95 351.7 416 52.2
Nn3g17842 Nelumbo nucifera HOM05D004612 ORTHO05D004940 1.1e-94 350.9 429 52.2
Potri.014G080600 Populus trichocarpa HOM05D004612 ORTHO05D004940 1.4e-94 350.5 422 52.1
PGR031G1383 Punica granatum HOM05D004612 ORTHO05D004940 2.1e-93 346.7 407 54.1
TWI59G0622 Tripterygium wilfordii HOM05D004612 ORTHO05D004940 3.5e-93 345.9 416 51.4
FvH4_7g13631 Fragaria vesca HOM05D004612 ORTHO05D004940 6.0e-93 345.1 418 51.0
FAN10G2510 Fragaria x ananassa HOM05D004612 ORTHO05D004940 6.0e-93 345.1 412 51.9
Eucgr.D02267 Eucalyptus grandis HOM05D004612 ORTHO05D004940 7.9e-93 344.7 393 53.9
FAN06G2470 Fragaria x ananassa HOM05D004612 ORTHO05D004940 7.9e-93 344.7 415 51.3
FAN06G3441 Fragaria x ananassa HOM05D004612 ORTHO05D004940 1.0e-92 344.4 415 51.3
MELO3C006131.2 Cucumis melo HOM05D004612 ORTHO05D004940 6.7e-92 341.7 428 49.8
CsaV3_3G009110 Cucumis sativus L. HOM05D004612 ORTHO05D004940 6.7e-92 341.7 424 50.2
Manes.12G065000 Manihot esculenta HOM05D004612 ORTHO05D004940 8.7e-92 341.3 423 50.4
vmacro13313 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 3.3e-91 339.3 411 53.8
ClCG05G001720 Citrullus lanatus HOM05D004612 ORTHO05D004940 6.3e-90 335.1 445 48.5
CiPaw.02G028400 Carya illinoinensis HOM05D004612 ORTHO05D004940 6.9e-89 331.6 401 50.9
Thecc.01G363500 Theobroma cacao HOM05D004612 ORTHO05D004940 5.9e-88 328.6 424 50.5
Cpa.g.sc20.34 Carica papaya HOM05D004612 ORTHO05D004940 1.3e-87 327.4 420 47.9
TPR.G4369 Trifolium pratense HOM05D004612 ORTHO05D004940 3.8e-87 325.9 403 50.4
Nitab4.5_0010827g0010 Nicotiana tabacum HOM05D004612 ORTHO05D004940 6.5e-87 325.1 411 50.6
Glyma.03G096900 Glycine max HOM05D004612 ORTHO05D004940 8.5e-87 324.7 400 51.5
Gohir.A11G082600 Gossypium hirsutum HOM05D004612 ORTHO05D004940 8.5e-87 324.7 412 51.0
Lalb_Chr10g0097231 Lupinus albus HOM05D004612 ORTHO05D004940 1.4e-86 323.9 398 51.8
MSTRG.17249 Avicennia marina HOM05D004612 ORTHO05D004940 1.9e-86 323.6 399 50.9
Psat4g153800 Pisum sativum HOM05D004612 ORTHO05D004940 7.2e-86 321.6 396 50.5
Sed0015875 Sechium edule HOM05D004612 ORTHO05D004940 1.6e-85 320.5 416 50.2
FAN03G2220 Fragaria x ananassa HOM05D004612 ORTHO05D004940 3.6e-85 319.3 459 45.5
Lj3g0020312 Lotus japonicus HOM05D004612 ORTHO05D004940 4.6e-85 318.9 403 49.9
Cc02_g37600 Coffea canephora HOM05D004612 ORTHO05D004940 6.1e-85 318.5 422 48.1
Ca_27541_v3 Cicer arietinum L. HOM05D004612 ORTHO05D004940 7.9e-85 318.2 395 51.6
Lj9C580G6 Lonicera japonica HOM05D004612 ORTHO05D004940 7.9e-85 318.2 398 51.8
SalBow3G1907 Salvia bowleyana HOM05D004612 ORTHO05D004940 1.0e-84 317.8 422 48.8
Sopen05g028090 Solanum pennellii HOM05D004612 ORTHO05D004940 1.0e-84 317.8 425 47.3
Medtr8g031580 Medicago truncatula HOM05D004612 ORTHO05D004940 1.3e-84 317.4 399 50.9
Nitab4.5_0002608g0040 Nicotiana tabacum HOM05D004612 ORTHO05D004940 2.3e-84 316.6 424 48.1
arahy.Tifrunner.gnm1.ann1.4I97V1 Arachis hypogaea HOM05D004612 ORTHO05D004940 6.7e-84 315.1 408 48.0
Gorai.007G097300 Gossypium raimondii HOM05D004612 ORTHO05D004940 6.7e-84 315.1 425 48.5
Thhalv10028700m.g Eutrema salsugineum HOM05D004612 ORTHO05D004940 1.5e-83 313.9 417 47.7
Solyc05g048770.3 Solanum lycopersicum HOM05D004612 ORTHO05D004940 1.9e-83 313.5 425 47.3
Duzib133G0359 Durio zibethinus HOM05D004612 ORTHO05D004940 2.2e-82 310.1 429 48.0
AL6G52840 Arabidopsis lyrata HOM05D004612 ORTHO05D004940 8.2e-82 308.1 411 47.4
BraA09t35721Z Brassica rapa HOM05D004612 ORTHO05D004940 2.4e-81 306.6 416 47.4
CSS0037024 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 2.4e-81 306.6 337 59.6
C09p00500 Brassica napus HOM05D004612 ORTHO05D004940 7.7e-80 301.6 415 47.0
AUR62033332 Chenopodium quinoa HOM05D004612 ORTHO05D004940 1.3e-79 300.8 439 45.3
BcaB01g02261 Brassica carinata HOM05D004612 ORTHO05D004940 1.7e-79 300.4 414 47.1
HanXRQChr16g0523031 Helianthus annuus HOM05D004612 ORTHO05D004940 3.8e-79 299.3 397 47.9
Carub.0006s3663 Capsella rubella HOM05D004612 ORTHO05D004940 5.0e-79 298.9 412 45.9
THA.LOC104801450 Tarenaya hassleriana HOM05D004612 ORTHO05D004940 5.0e-79 298.9 407 45.9
Aa31LG5G400 Aethionema arabicum HOM05D004612 ORTHO05D004940 1.9e-78 297.0 421 44.9
COL.COLO4_12673 Corchorus olitorius HOM05D004612 ORTHO05D004940 3.2e-78 296.2 394 48.5
BcaB01g02263 Brassica carinata HOM05D004612 ORTHO05D004940 4.2e-78 295.8 402 47.8
Migut.B01722 Erythranthe guttata HOM05D004612 ORTHO05D004940 4.2e-78 295.8 402 47.5
Sc07g0008070 Simmondsia chinensis HOM05D004612 ORTHO05D004940 4.2e-78 295.8 422 44.5
ECA234G1569 Erigeron canadensis HOM05D004612 ORTHO05D004940 5.5e-78 295.4 419 46.3
RcHm_v2.0_Chr1g0353691 Rosa chinensis HOM05D004612 ORTHO05D004940 7.2e-78 295.0 341 52.5
EL10Ac1g00526 Beta vulgaris HOM05D004612 ORTHO05D004940 1.6e-77 293.9 406 47.3
AUR62004317 Chenopodium quinoa HOM05D004612 ORTHO05D004940 1.6e-77 293.9 418 45.5
BolC9t52984H Brassica oleracea HOM05D004612 ORTHO05D004940 2.1e-77 293.5 428 45.6
DCAR_008600 Daucus carota HOM05D004612 ORTHO05D004940 3.6e-77 292.7 420 46.4
Lsat_1_v5_gn_4_36480 Lactuca sativa HOM05D004612 ORTHO05D004940 6.1e-77 292.0 362 51.9
A09p00400 Brassica napus HOM05D004612 ORTHO05D004940 3.0e-76 289.7 416 46.2
CAN.G718.1 Capsicum annuum HOM05D004612 ORTHO05D004940 3.0e-76 289.7 417 44.8
PSO063G2700 Papaver somniferum HOM05D004612 ORTHO05D004940 1.5e-75 287.3 430 45.6
Peaxi162Scf00397g00041 Petunia axillaris HOM05D004612 ORTHO05D004940 3.3e-75 286.2 389 48.8
BcaC04g24158 Brassica carinata HOM05D004612 ORTHO05D004940 1.3e-74 284.3 415 45.8
PSO782G5368 Papaver somniferum HOM05D004612 ORTHO05D004940 1.3e-74 284.3 429 45.0
Atru.chr5.445 Acer truncatum HOM05D004612 ORTHO05D004940 1.7e-74 283.9 304 56.2
Sabra14G0058500 Salix brachista HOM05D004612 ORTHO05D004940 6.9e-73 278.5 424 46.0
AT4G00590 Arabidopsis thaliana HOM05D004612 ORTHO05D004940 1.1e-70 271.2 411 44.5
MD01G1053600 Malus domestica HOM05D004612 ORTHO05D004940 2.5e-70 270.0 320 51.6
Ah.05g176430 Amaranthus hybridus HOM05D004612 ORTHO05D004940 6.1e-69 265.4 435 42.5
AUR62023440 Chenopodium quinoa HOM05D004612 ORTHO05D004940 5.2e-68 262.3 401 43.6
AUR62033327 Chenopodium quinoa HOM05D004612 ORTHO05D004940 5.2e-68 262.3 401 43.6
SGA_v2.0_scaffold95G28856 Striga asiatica HOM05D004612 ORTHO05D004940 5.2e-68 262.3 391 45.0
Hund16942 Selenicereus undatus HOM05D004612 ORTHO05D004940 8.8e-68 261.5 368 46.5
Prupe.2G162500 Prunus persica HOM05D004612 ORTHO05D004940 2.6e-67 260.0 318 51.3
Phvul.011G160800 Phaseolus vulgaris HOM05D004612 ORTHO05D004940 7.4e-67 258.5 304 51.0
Os04g0682500 Oryza sativa ssp. japonica HOM05D004612 ORTHO05D004940 2.8e-66 256.5 414 42.8
FAN01G1921 Fragaria x ananassa HOM05D000092 ORTHO05D004940 5.3e-65 252.3 439 41.0
ATR0680G383 Amborella trichopoda HOM05D004612 ORTHO05D004940 2.6e-64 250.0 396 43.2
HPP92_021103 Vanilla planifolia HOM05D004612 ORTHO05D004940 5.0e-63 245.7 417 40.3
unitig_0.g1278 Utricularia gibba HOM05D004612 ORTHO05D004940 4.0e-60 236.1 419 41.8
Aqoxy46s002 Aquilegia oxysepala HOM05D004612 ORTHO05D004940 3.3e-59 233.0 347 45.0
Gohir.D11G091300 Gossypium hirsutum HOM05D004612 ORTHO05D004940 1.3e-55 221.1 282 48.9
MBI17_g08173_MAGBIO Magnolia biondii HOM05D004612 ORTHO05D004940 2.5e-54 216.9 354 41.8
Oeu014678.1 Olea europaea HOM05D004612 ORTHO05D004940 2.7e-53 213.4 427 39.6
Pp3c10_3850 Physcomitrium patens HOM05D004612 ORTHO05D004940 9.8e-51 204.9 359 39.8
BcaNung07163 Brassica carinata HOM05D004612 ORTHO05D004940 1.1e-49 201.4 315 43.5
CARHR248760 Cardamine hirsuta HOM05D004612 ORTHO05D004940 3.1e-49 199.9 309 42.7
BcaNung05358 Brassica carinata HOM05D004612 ORTHO05D004940 1.6e-48 197.6 337 41.2
AagrBONN_evm.TU.Sc2ySwM_344.1798 Anthoceros agrestis HOM05D004612 ORTHO05D004940 6.1e-45 185.7 352 38.1
TWI59G1187 Tripterygium wilfordii HOM05D004612 ORTHO05D004940 4.4e-43 179.5 273 44.7
SMO364G0809 Selaginella moellendorffii HOM05D004612 ORTHO05D004940 1.1e-41 174.9 375 38.1
CARHR288840 Cardamine hirsuta HOM05D004612 ORTHO05D004940 2.4e-41 173.7 281 42.3
Sp6g00630 Schrenkiella parvula HOM05D004612 ORTHO05D004940 9.2e-41 171.8 271 41.7
VMungo1127G0842 Vigna mungo HOM05D004612 ORTHO05D004940 3.8e-39 166.4 213 50.2
CSS0007536 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 3.3e-38 163.3 134 68.7
Nitab4.5_0010110g0020 Nicotiana tabacum HOM05D004612 ORTHO05D004940 3.6e-37 159.8 262 41.2
Zm00001eb433970 Zea mays HOM05D004612 ORTHO05D004940 8.0e-37 158.7 297 38.7
Mapoly0068s0044 Marchantia polymorpha HOM05D004612 ORTHO05D004940 1.8e-36 157.5 311 35.7
CDE05G3327 Ceratophyllum demersum HOM05D004612 ORTHO05D004940 5.7e-35 152.5 403 34.2
VMungo1127G0482 Vigna mungo HOM05D004612 ORTHO05D004940 6.4e-34 149.1 187 48.7
Haze_05813 Corylus avellana HOM05D000402 ORTHO05D004940 1.1e-33 148.3 113 64.6
Prupe.8G034000 Prunus persica HOM05D004612 ORTHO05D004940 5.9e-32 142.5 162 54.9
vmacro13422 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 2.3e-31 140.6 262 39.7
Peaxi162Scf00246g01122 Petunia axillaris HOM05D004612 ORTHO05D004940 5.2e-28 129.4 164 49.4
Gohir.D02G148550 Gossypium hirsutum HOM05D004612 ORTHO05D004940 8.9e-28 128.6 158 51.3
PGSC0003DMG400021637 Solanum tuberosum HOM05D004612 ORTHO05D004940 1.2e-27 128.3 164 45.7
SEGI_36589 Sequoiadendron giganteum HOM05D004612 ORTHO05D004940 3.7e-26 123.2 110 60.0
Gorai.005G166700 Gossypium raimondii HOM05D004612 ORTHO05D004940 4.9e-26 122.9 158 51.9
vmacro00164 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 1.3e-23 114.8 198 39.4
vmacro13311 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 1.2e-21 108.2 176 44.3
Aqoxy5G04026 Aquilegia oxysepala HOM05D004612 ORTHO05D004940 1.6e-21 107.8 204 37.7
vmacro22088 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 8.9e-20 102.1 192 39.6
vmacro13310 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 1.4e-17 94.7 135 45.2
SEGI_15231 Sequoiadendron giganteum HOM05D004612 ORTHO05D004940 2.3e-15 87.4 79 62.0
Cc02_g28690 Coffea canephora HOM05D004612 ORTHO05D004940 3.9e-15 86.7 150 38.0
Gorai.005G189400 Gossypium raimondii HOM05D004612 ORTHO05D004940 1.1e-14 85.1 158 41.1
Oeu004526.1 Olea europaea HOM05D004612 ORTHO05D004940 1.1e-14 85.1 134 43.3
Gohir.D02G101800 Gossypium hirsutum HOM05D004612 ORTHO05D004940 5.6e-14 82.8 70 68.6
Cre11.g480750 Chlamydomonas reinhardtii HOM05D004612 ORTHO05D004940 9.5e-14 82.0 188 38.3
arahy.Tifrunner.gnm1.ann1.B6YWYF Arachis hypogaea HOM05D004612 ORTHO05D004940 3.6e-13 80.1 105 46.7
Gorai.007G277100 Gossypium raimondii HOM05D004612 ORTHO05D004940 4.7e-13 79.7 70 67.1
CSS0015544 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 8.1e-13 79.0 87 56.3
Gohir.D11G259000 Gossypium hirsutum HOM05D004612 ORTHO05D004940 2.3e-12 77.4 70 65.7
Gorai.005G115400 Gossypium raimondii HOM05D004612 ORTHO05D004940 2.3e-12 77.4 70 65.7
Gohir.D02G169000 Gossypium hirsutum HOM05D004612 ORTHO05D004940 4.4e-11 73.2 67 64.2
CBR_g30725 Chara braunii HOM05D004612 ORTHO05D004940 5.8e-11 72.8 115 35.7
SEGI_33425 Sequoiadendron giganteum HOM05D004612 ORTHO05D004940 5.8e-11 72.8 103 45.6
Atru.chr5.446 Acer truncatum HOM05D004612 ORTHO05D004940 2.2e-10 70.9 84 48.8
CSS0007523 Camellia sinensis var. sinensis HOM05D025959 ORTHO05D111461 4.9e-10 69.7 45 75.6
CSS0011716 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 2.4e-09 67.4 78 55.1
CSS0020995 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 4.1e-09 66.6 60 63.3
RcHm_v2.0_Chr1g0353681 Rosa chinensis HOM05D004612 ORTHO05D004940 4.1e-09 66.6 42 81.0
Actinidia20931 Actinidia chinensis HOM05D004612 ORTHO05D004940 1.2e-08 65.1 48 72.9
CDE05G2136 Ceratophyllum demersum HOM05D004612 ORTHO05D004940 3.5e-08 63.5 92 42.4
MD01G1053500 Malus domestica HOM05D004612 ORTHO05D004940 3.5e-08 63.5 58 58.6
Lsat_1_v5_gn_5_81800 Lactuca sativa HOM05D004612 ORTHO05D004940 3.0e-07 60.5 54 59.3
CSS0005777 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 1.9e-06 57.8 36 77.8
Gohir.D12G186900 Gossypium hirsutum HOM05D002101 ORTHO05D002126 5.6e-06 56.2 285 24.9

Acer truncatum (2 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (5 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (12 genes)
Cannabis sativa (0 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (4 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (1 genes)
Gossypium hirsutum (7 genes)
Gossypium raimondii (5 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (3 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (3 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (3 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (6 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings