Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039339 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 0.0e+00 1699.5 868 100.0
CSS0034147 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 0.0e+00 1699.1 868 99.9
Rhsim04G0074900 Rhododendron simsii HOM05D006510 ORTHO05D008171 0.0e+00 1380.9 870 81.6
Actinidia03942 Actinidia chinensis HOM05D006510 ORTHO05D008171 0.0e+00 1352.0 825 84.2
QL08p042146 Quercus lobata HOM05D006510 ORTHO05D008171 0.0e+00 1275.0 866 74.2
Cfa021921 Carpinus fangiana HOM05D006510 ORTHO05D008171 0.0e+00 1232.6 866 72.5
Hma1.2p1_0178F.1_g078710 Hydrangea macrophylla HOM05D006510 ORTHO05D008171 0.0e+00 1231.5 871 74.1
Duzib147G0397 Durio zibethinus HOM05D006510 ORTHO05D008171 0.0e+00 1228.0 868 73.4
CiPaw.03G194300 Carya illinoinensis HOM05D006510 ORTHO05D008171 0.0e+00 1214.1 868 71.5
Thecc.01G152700 Theobroma cacao HOM05D006510 ORTHO05D008171 0.0e+00 1214.1 868 71.4
COL.COLO4_33599 Corchorus olitorius HOM05D006510 ORTHO05D008171 0.0e+00 1205.7 868 72.0
Lj8C100T15 Lonicera japonica HOM05D006510 ORTHO05D008171 0.0e+00 1203.0 885 71.9
FAN14G1437 Fragaria x ananassa HOM05D006510 ORTHO05D008171 0.0e+00 1194.9 869 70.8
FvH4_6g27600 Fragaria vesca HOM05D006510 ORTHO05D008171 0.0e+00 1193.7 869 70.8
FAN05G5099 Fragaria x ananassa HOM05D006510 ORTHO05D008171 0.0e+00 1188.3 869 70.9
FAN02G4134 Fragaria x ananassa HOM05D006510 ORTHO05D008171 0.0e+00 1187.2 869 70.8
Prupe.3G115700 Prunus persica HOM05D006510 ORTHO05D008171 0.0e+00 1186.0 870 70.8
Atru.chr6.2773 Acer truncatum HOM05D006510 ORTHO05D008171 0.0e+00 1185.6 868 71.0
Haze_13408 Corylus avellana HOM05D006510 ORTHO05D008171 0.0e+00 1185.2 859 70.8
Potri.014G142900 Populus trichocarpa HOM05D006510 ORTHO05D008171 0.0e+00 1178.3 870 70.2
PGSC0003DMG400015368 Solanum tuberosum HOM05D006510 ORTHO05D008171 0.0e+00 1175.6 863 70.2
Sopen12g005700 Solanum pennellii HOM05D006510 ORTHO05D008171 0.0e+00 1172.1 864 70.3
RcHm_v2.0_Chr2g0130091 Rosa chinensis HOM05D006510 ORTHO05D008171 0.0e+00 1170.6 869 70.2
GSVIVG01020726001 Vitis vinifera HOM05D006510 ORTHO05D008171 0.0e+00 1170.2 868 70.5
Solyc12g013950.2 Solanum lycopersicum HOM05D006510 ORTHO05D008171 0.0e+00 1169.8 864 70.3
Peaxi162Scf00229g01116 Petunia axillaris HOM05D006510 ORTHO05D008171 0.0e+00 1169.5 849 70.9
Lj3g0027149 Lotus japonicus HOM05D006510 ORTHO05D008171 0.0e+00 1168.7 868 70.0
MD11G1004500 Malus domestica HOM05D006510 ORTHO05D008171 0.0e+00 1167.1 870 69.8
Nitab4.5_0002027g0190 Nicotiana tabacum HOM05D006510 ORTHO05D008171 0.0e+00 1164.4 853 70.2
CAN.G1716.4 Capsicum annuum HOM05D006510 ORTHO05D008171 0.0e+00 1157.5 863 69.3
Gorai.006G003700 Gossypium raimondii HOM05D006510 ORTHO05D008171 0.0e+00 1155.6 869 69.6
CANSAT78G1126 Cannabis sativa HOM05D006510 ORTHO05D008171 0.0e+00 1154.4 871 68.2
Gohir.A09G003200 Gossypium hirsutum HOM05D006510 ORTHO05D008171 0.0e+00 1152.5 869 69.5
Cc05_g08450 Coffea canephora HOM05D006510 ORTHO05D008171 0.0e+00 1150.2 868 70.9
Glyma.12G129300 Glycine max HOM05D006510 ORTHO05D008171 0.0e+00 1150.2 868 70.4
Lalb_Chr24g0400131 Lupinus albus HOM05D006510 ORTHO05D008171 0.0e+00 1149.0 868 69.2
arahy.Tifrunner.gnm1.ann1.J1H900 Arachis hypogaea HOM05D006510 ORTHO05D008171 0.0e+00 1148.3 868 69.1
Glyma.06G276100 Glycine max HOM05D006510 ORTHO05D008171 0.0e+00 1144.8 868 69.9
Ciclev10014241m.g Citrus clementina HOM05D006510 ORTHO05D008171 0.0e+00 1144.4 868 67.6
TAR636G1540 Trochodendron aralioides HOM05D006510 ORTHO05D008171 0.0e+00 1143.3 877 68.2
TPR.G13821 Trifolium pratense HOM05D006510 ORTHO05D008171 0.0e+00 1141.3 869 69.7
TPR.G16532 Trifolium pratense HOM05D006510 ORTHO05D008171 0.0e+00 1141.3 865 69.5
DCAR_013276 Daucus carota HOM05D006510 ORTHO05D008171 0.0e+00 1139.4 877 68.3
TWI38G0436 Tripterygium wilfordii HOM05D006510 ORTHO05D008171 0.0e+00 1138.3 868 69.4
arahy.Tifrunner.gnm1.ann1.JGR80D Arachis hypogaea HOM05D006510 ORTHO05D008171 0.0e+00 1137.1 868 68.4
Phvul.011G128400 Phaseolus vulgaris HOM05D006510 ORTHO05D008171 0.0e+00 1129.8 865 68.4
PGR142G2695 Punica granatum HOM05D006510 ORTHO05D008171 0.0e+00 1125.5 868 68.0
Eucgr.K01140 Eucalyptus grandis HOM05D006510 ORTHO05D008171 0.0e+00 1122.8 866 67.0
Manes.07G057100 Manihot esculenta HOM05D006510 ORTHO05D008171 0.0e+00 1120.9 869 67.9
Sabra14G0108000 Salix brachista HOM05D006510 ORTHO05D008171 0.0e+00 1117.1 871 68.0
Nitab4.5_0006142g0020 Nicotiana tabacum HOM05D006510 ORTHO05D008171 0.0e+00 1114.8 853 67.9
Psat7g163800 Pisum sativum HOM05D006510 ORTHO05D008171 0.0e+00 1110.5 869 68.4
MELO3C002806.2 Cucumis melo HOM05D006510 ORTHO05D008171 0.0e+00 1108.2 871 65.6
CsaV3_1G037360 Cucumis sativus L. HOM05D006510 ORTHO05D008171 0.0e+00 1106.3 871 65.7
Ca_18866_v3 Cicer arietinum L. HOM05D006510 ORTHO05D008171 0.0e+00 1104.4 868 67.9
Migut.M00272 Erythranthe guttata HOM05D006510 ORTHO05D008171 0.0e+00 1103.2 875 67.7
ClCG07G002720 Citrullus lanatus HOM05D006510 ORTHO05D008171 0.0e+00 1098.6 874 65.6
Medtr4g080110 Medicago truncatula HOM05D006510 ORTHO05D008171 0.0e+00 1092.4 869 66.6
Gohir.D09G003000 Gossypium hirsutum HOM05D006510 ORTHO05D008171 0.0e+00 1088.2 869 66.9
Nn8g40464 Nelumbo nucifera HOM05D006510 ORTHO05D008171 0.0e+00 1076.6 877 64.9
PSO782G3259 Papaver somniferum HOM05D006510 ORTHO05D008171 7.7e-310 1067.0 871 64.5
Oeu001793.2 Olea europaea HOM05D006510 ORTHO05D008171 6.5e-309 1063.9 805 69.2
THA.LOC104823853 Tarenaya hassleriana HOM05D006510 ORTHO05D008171 4.2e-308 1061.2 875 64.2
Sed0011358 Sechium edule HOM05D006510 ORTHO05D008171 1.8e-306 1055.8 869 63.2
ECA248G1772 Erigeron canadensis HOM05D006510 ORTHO05D008171 2.0e-305 1052.4 868 63.8
Aqoxy5G02856 Aquilegia oxysepala HOM05D006510 ORTHO05D008171 1.4e-303 1046.2 879 62.3
AT2G42700 Arabidopsis thaliana HOM05D006510 ORTHO05D008171 1.1e-300 1036.6 872 63.3
Hma1.2p1_0178F.1_g078700 Hydrangea macrophylla HOM05D006510 ORTHO05D008171 4.2e-300 1034.6 811 68.4
PSO478G4451 Papaver somniferum HOM05D006510 ORTHO05D008171 1.4e-298 1029.6 871 63.3
MBI16_g39629_MAGBIO Magnolia biondii HOM05D006510 ORTHO05D008171 5.2e-298 1027.7 876 63.1
Carub.0004s2514 Capsella rubella HOM05D006510 ORTHO05D008171 2.0e-297 1025.8 873 63.2
EL10Ac9g20963 Beta vulgaris HOM05D006510 ORTHO05D008171 1.7e-296 1022.7 868 63.6
AL4G41260 Arabidopsis lyrata HOM05D006510 ORTHO05D008171 2.2e-296 1022.3 872 62.8
Sp4g24850 Schrenkiella parvula HOM05D006510 ORTHO05D008171 7.0e-295 1017.3 873 62.9
Thhalv10016247m.g Eutrema salsugineum HOM05D006510 ORTHO05D008171 9.1e-295 1016.9 873 62.7
CARHR137800 Cardamine hirsuta HOM05D006510 ORTHO05D008171 1.0e-293 1013.4 874 62.4
Aa31LG1G24480 Aethionema arabicum HOM05D006510 ORTHO05D008171 1.3e-293 1013.1 917 60.5
C04p03920 Brassica napus HOM05D006510 ORTHO05D008171 1.3e-293 1013.1 874 62.1
AUR62041733 Chenopodium quinoa HOM05D006510 ORTHO05D008171 1.5e-292 1009.6 856 63.2
A05p03350 Brassica napus HOM05D006510 ORTHO05D008171 1.0e-290 1003.4 872 62.2
Sc12g0003550 Simmondsia chinensis HOM05D006510 ORTHO05D008171 5.2e-290 1001.1 808 65.0
BraA05t19323Z Brassica rapa HOM05D006510 ORTHO05D008171 3.3e-289 998.4 874 61.8
FAN09G2536 Fragaria x ananassa HOM05D006510 ORTHO05D008171 4.2e-284 981.5 755 68.3
vmacro09212 Vaccinium macrocarpon HOM05D006510 ORTHO05D008171 3.0e-282 975.3 811 65.7
Lsat_1_v5_gn_4_64481 Lactuca sativa HOM05D006510 ORTHO05D008171 1.1e-279 966.8 872 59.7
VMungo1127G1883 Vigna mungo HOM05D006510 ORTHO05D008171 1.8e-279 966.1 755 67.7
Ah.01g004980 Amaranthus hybridus HOM05D006510 ORTHO05D008171 9.1e-279 963.8 810 64.1
AUR62029599 Chenopodium quinoa HOM05D006510 ORTHO05D008171 7.2e-276 954.1 852 60.9
BolC4t22028H Brassica oleracea HOM05D006510 ORTHO05D008171 1.5e-273 946.4 832 61.4
SGA_v2.0_scaffold9G04837 Striga asiatica HOM05D006510 ORTHO05D008171 2.5e-268 929.1 869 59.3
unitig_46.g18272 Utricularia gibba HOM05D006510 ORTHO05D008171 4.3e-268 928.3 870 56.4
ATR0796G261 Amborella trichopoda HOM05D006510 ORTHO05D008171 1.2e-257 893.6 857 56.7
Dinv07684 Davidia involucrata HOM05D006510 ORTHO05D008171 9.2e-255 884.0 691 69.2
CDE04G2642 Ceratophyllum demersum HOM05D006510 ORTHO05D008171 1.2e-249 867.1 870 53.2
Os11g0169100 Oryza sativa ssp. japonica HOM05D006510 ORTHO05D008171 3.3e-244 849.0 872 52.5
arahy.Tifrunner.gnm1.ann1.H5IL2E Arachis hypogaea HOM05D006510 ORTHO05D008171 4.7e-243 845.1 651 68.2
HPP92_014652 Vanilla planifolia HOM05D006510 ORTHO05D008171 2.4e-231 806.2 859 52.9
Zm00001eb297610 Zea mays HOM05D006510 ORTHO05D008171 5.1e-205 718.8 754 51.2
TAR629G2876 Trochodendron aralioides HOM05D006510 ORTHO05D008171 1.7e-184 650.6 526 65.2
SEGI_27047 Sequoiadendron giganteum HOM05D006510 ORTHO05D008171 1.3e-168 597.8 741 47.1
SalBow7G4578 Salvia bowleyana HOM05D006510 ORTHO05D008171 2.8e-158 563.5 438 66.2
Mapoly0047s0091 Marchantia polymorpha HOM05D006510 ORTHO05D008171 9.2e-138 495.4 845 37.3
Pp3c9_21860 Physcomitrium patens HOM05D006510 ORTHO05D008171 6.0e-137 492.7 881 37.0
SMO164G0050 Selaginella moellendorffii HOM05D006510 ORTHO05D008171 1.5e-135 488.0 856 38.8
Cpa.g.sc52.162 Carica papaya HOM05D006510 ORTHO05D008171 1.3e-104 385.2 327 63.3
CBR_g35046 Chara braunii HOM05D006510 ORTHO05D008171 8.2e-94 349.4 981 30.0
Cpa.g.sc52.161 Carica papaya HOM05D006510 ORTHO05D008171 1.9e-58 231.9 189 62.4
Dinv07685 Davidia involucrata HOM05D006510 ORTHO05D008171 5.6e-34 150.6 100 76.0
TAR629G0105 Trochodendron aralioides HOM05D006510 ORTHO05D008171 2.3e-27 128.6 86 69.8
VMungo1127G1894 Vigna mungo HOM05D006510 ORTHO05D008171 3.5e-20 104.8 97 56.7
Cre11.g479200 Chlamydomonas reinhardtii HOM05D006510 ORTHO05D008171 1.3e-19 102.8 592 21.1
Cpa.g.c45723 Carica papaya HOM05D006510 ORTHO05D008171 1.9e-18 99.0 63 73.0
Hund07777 Selenicereus undatus HOM05D006510 ORTHO05D008171 1.4e-16 92.8 66 69.7
HanXRQChr09g0251831 Helianthus annuus HOM05D006510 ORTHO05D008171 6.8e-16 90.5 57 73.7
unitig_46.g18270 Utricularia gibba HOM05D006510 ORTHO05D008171 8.9e-16 90.1 65 66.2
MCO09G591 Micromonas commoda HOM05D006510 ORTHO05D008171 7.5e-15 87.0 591 23.2
Solyc01g011180.1 Solanum lycopersicum HOM05D006510 ORTHO05D008171 9.9e-15 86.7 57 70.2
Solyc01g011190.1 Solanum lycopersicum HOM05D006510 ORTHO05D008171 4.9e-14 84.3 57 64.9
BcaB01g03423 Brassica carinata HOM05D001990 ORTHO05D002033 5.6e-10 70.9 86 47.7
Lsat_1_v5_gn_4_67501 Lactuca sativa HOM05D001373 ORTHO05D001330 4.0e-08 64.7 44 68.2
arahy.Tifrunner.gnm1.ann1.JPYC3C Arachis hypogaea HOM05D006510 ORTHO05D008171 1.2e-07 63.2 42 66.7
BraA03t11594Z Brassica rapa HOM05D006510 ORTHO05D008171 1.2e-07 63.2 101 45.5
Lsat_1_v5_gn_9_51101 Lactuca sativa HOM05D003114 ORTHO05D003519 4.4e-07 61.2 47 61.7
SEGI_32298 Sequoiadendron giganteum HOM05D006510 ORTHO05D008171 2.2e-06 58.9 51 51.0

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (3 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (3 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (3 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

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