Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038912 Camellia sinensis var. sinensis HOM05D002034 ORTHO05D004251 4.9e-79 297.7 150 100.0
CSS0042911 Camellia sinensis var. sinensis HOM05D002034 ORTHO05D004251 2.7e-61 238.8 183 73.2
CSS0015957 Camellia sinensis var. sinensis HOM05D002034 ORTHO05D004251 1.5e-59 233.0 146 83.6
CSS0014057 Camellia sinensis var. sinensis HOM05D002034 ORTHO05D004251 4.7e-58 228.0 146 81.5
CSS0025945 Camellia sinensis var. sinensis HOM05D002034 ORTHO05D004251 2.0e-56 222.6 146 80.1
CSS0002014 Camellia sinensis var. sinensis HOM05D002034 ORTHO05D004251 4.9e-55 218.0 184 67.4
CSS0000627 Camellia sinensis var. sinensis HOM05D002034 ORTHO05D004251 1.8e-49 199.5 129 81.4
Rhsim13G0065900 Rhododendron simsii HOM05D002034 ORTHO05D004251 1.5e-40 169.9 146 63.0
Dinv28678 Davidia involucrata HOM05D002034 ORTHO05D004251 1.4e-38 163.3 132 65.9
vmacro02934 Vaccinium macrocarpon HOM05D002034 ORTHO05D004251 9.3e-38 160.6 146 61.0
Haze_24388 Corylus avellana HOM05D002034 ORTHO05D004251 4.3e-35 151.8 106 75.5
GSVIVG01024678001 Vitis vinifera HOM05D002034 ORTHO05D004251 9.6e-35 150.6 136 61.0
Prupe.6G051700 Prunus persica HOM05D002034 ORTHO05D004251 1.6e-34 149.8 130 62.3
TAR369G0522 Trochodendron aralioides HOM05D002034 ORTHO05D004251 4.8e-34 148.3 118 66.9
Hma1.2p1_0841F.1_g226850 Hydrangea macrophylla HOM05D002034 ORTHO05D004251 1.1e-33 147.1 137 58.4
RcHm_v2.0_Chr5g0070931 Rosa chinensis HOM05D002034 ORTHO05D004251 1.4e-33 146.7 143 55.2
FAN16G1479 Fragaria x ananassa HOM05D002034 ORTHO05D004251 1.8e-33 146.4 112 66.1
FvH4_3g39400 Fragaria vesca HOM05D002034 ORTHO05D004251 4.0e-33 145.2 112 65.2
FAN11G3897 Fragaria x ananassa HOM05D002034 ORTHO05D004251 4.0e-33 145.2 112 65.2
FAN25G3060 Fragaria x ananassa HOM05D002034 ORTHO05D004251 6.9e-33 144.4 113 64.6
Lj1C128T10 Lonicera japonica HOM05D002034 ORTHO05D004251 5.8e-32 141.4 114 64.9
CAN.G1095.17 Capsicum annuum HOM05D002034 ORTHO05D004251 7.6e-32 141.0 129 60.5
QL01p039781 Quercus lobata HOM05D002034 ORTHO05D004251 7.6e-32 141.0 157 53.5
VMungo0540G1016 Vigna mungo HOM05D002034 ORTHO05D004251 9.9e-32 140.6 119 62.2
Lalb_Chr04g0252081 Lupinus albus HOM05D002034 ORTHO05D004251 4.9e-31 138.3 134 53.7
Cpa.g.sc2.385 Carica papaya HOM05D002034 ORTHO05D004251 6.4e-31 137.9 138 58.7
Nn2g10970 Nelumbo nucifera HOM05D002034 ORTHO05D004251 6.4e-31 137.9 136 52.9
TWI31G1212 Tripterygium wilfordii HOM05D002034 ORTHO05D004251 6.4e-31 137.9 109 66.1
Phvul.006G072400 Phaseolus vulgaris HOM05D002034 ORTHO05D004251 8.4e-31 137.5 119 60.5
Solyc06g082200.4 Solanum lycopersicum HOM05D002034 ORTHO05D004251 8.4e-31 137.5 131 61.8
Sopen06g033580 Solanum pennellii HOM05D002034 ORTHO05D004251 8.4e-31 137.5 131 61.8
Potri.009G076000 Populus trichocarpa HOM05D002034 ORTHO05D004251 1.9e-30 136.3 137 59.1
Aqoxy2G00822 Aquilegia oxysepala HOM05D002034 ORTHO05D004251 2.4e-30 136.0 106 67.0
Thecc.09G354800 Theobroma cacao HOM05D002034 ORTHO05D004251 2.4e-30 136.0 106 69.8
Glyma.18G058700 Glycine max HOM05D002034 ORTHO05D004251 3.2e-30 135.6 122 57.4
CsaV3_1G036460 Cucumis sativus L. HOM05D002034 ORTHO05D004251 4.2e-30 135.2 146 52.1
Duzib168G1938 Durio zibethinus HOM05D002034 ORTHO05D004251 4.2e-30 135.2 122 63.9
FAN21G1045 Fragaria x ananassa HOM05D002034 ORTHO05D004251 5.5e-30 134.8 112 61.6
Lalb_Chr15g0083131 Lupinus albus HOM05D002034 ORTHO05D004251 5.5e-30 134.8 153 51.6
TAR357G0005 Trochodendron aralioides HOM05D002034 ORTHO05D004251 5.5e-30 134.8 121 60.3
PGSC0003DMG400030372 Solanum tuberosum HOM05D002034 ORTHO05D004251 1.2e-29 133.7 105 68.6
Glyma.11G165900 Glycine max HOM05D002034 ORTHO05D004251 2.7e-29 132.5 127 55.1
Lj6g0001278 Lotus japonicus HOM05D002034 ORTHO05D004251 2.7e-29 132.5 103 65.0
TPR.G32915 Trifolium pratense HOM05D002034 ORTHO05D004251 2.7e-29 132.5 109 61.5
Ca_14990_v3 Cicer arietinum L. HOM05D002034 ORTHO05D004251 4.6e-29 131.7 102 63.7
Ca_30101_v3 Cicer arietinum L. HOM05D002034 ORTHO05D004251 4.6e-29 131.7 102 63.7
COL.COLO4_11121 Corchorus olitorius HOM05D002034 ORTHO05D004251 4.6e-29 131.7 106 69.8
Duzib150G0116 Durio zibethinus HOM05D002034 ORTHO05D004251 4.6e-29 131.7 107 67.3
Psat5g155480 Pisum sativum HOM05D002034 ORTHO05D004251 4.6e-29 131.7 123 56.1
Sed0002046 Sechium edule HOM05D002034 ORTHO05D004251 6.0e-29 131.3 100 68.0
Gohir.A13G234000 Gossypium hirsutum HOM05D002034 ORTHO05D004251 7.9e-29 131.0 107 67.3
Medtr3g465600 Medicago truncatula HOM05D002034 ORTHO05D004251 1.3e-28 130.2 118 56.8
ECA247G1661 Erigeron canadensis HOM05D002034 ORTHO05D004251 3.0e-28 129.0 123 56.9
Gorai.013G270500 Gossypium raimondii HOM05D002034 ORTHO05D004251 3.0e-28 129.0 107 66.4
CANSAT54G3012 Cannabis sativa HOM05D002034 ORTHO05D004251 3.9e-28 128.6 102 63.7
Gohir.D13G239600 Gossypium hirsutum HOM05D002034 ORTHO05D004251 3.9e-28 128.6 106 67.0
MD11G1065500 Malus domestica HOM05D002034 ORTHO05D004251 3.9e-28 128.6 176 46.6
Peaxi162Scf00390g00823 Petunia axillaris HOM05D002034 ORTHO05D004251 5.1e-28 128.3 89 76.4
arahy.Tifrunner.gnm1.ann1.H18R60 Arachis hypogaea HOM05D002034 ORTHO05D004251 1.1e-27 127.1 87 74.7
arahy.Tifrunner.gnm1.ann1.Z7E5WK Arachis hypogaea HOM05D002034 ORTHO05D004251 1.1e-27 127.1 87 74.7
Cc01_g14670 Coffea canephora HOM05D002034 ORTHO05D004251 1.9e-27 126.3 136 55.1
Eucgr.B02225 Eucalyptus grandis HOM05D002034 ORTHO05D004251 2.5e-27 125.9 140 55.0
Manes.02G215950 Manihot esculenta HOM05D002034 ORTHO05D004251 2.5e-27 125.9 142 51.4
Gorai.003G148700 Gossypium raimondii HOM05D002034 ORTHO05D004251 3.3e-27 125.6 107 65.4
Gohir.A03G026800 Gossypium hirsutum HOM05D002034 ORTHO05D004251 7.4e-27 124.4 107 65.4
DCAR_018219 Daucus carota HOM05D002034 ORTHO05D004251 9.6e-27 124.0 113 61.9
arahy.Tifrunner.gnm1.ann1.RZ6BDN Arachis hypogaea HOM05D002034 ORTHO05D004251 1.3e-26 123.6 135 50.4
BraA10t43651Z Brassica rapa HOM05D002034 ORTHO05D004251 1.6e-26 123.2 145 53.1
Aa31LG11G290 Aethionema arabicum HOM05D002034 ORTHO05D004251 2.8e-26 122.5 112 61.6
PGR102G2830 Punica granatum HOM05D002034 ORTHO05D004251 2.8e-26 122.5 122 56.6
Gohir.D03G141700 Gossypium hirsutum HOM05D002034 ORTHO05D004251 4.8e-26 121.7 107 64.5
Lsat_1_v5_gn_9_18521 Lactuca sativa HOM05D002034 ORTHO05D004251 4.8e-26 121.7 102 63.7
PSO339G3538 Papaver somniferum HOM05D002034 ORTHO05D004251 4.8e-26 121.7 84 75.0
arahy.Tifrunner.gnm1.ann1.WA30K5 Arachis hypogaea HOM05D002034 ORTHO05D004251 8.2e-26 120.9 108 61.1
THA.LOC104799388 Tarenaya hassleriana HOM05D002034 ORTHO05D004251 8.2e-26 120.9 113 60.2
A10p15750 Brassica napus HOM05D002034 ORTHO05D004251 1.1e-25 120.6 145 52.4
C09p50470 Brassica napus HOM05D002034 ORTHO05D004251 1.1e-25 120.6 145 52.4
BolC9t57903H Brassica oleracea HOM05D002034 ORTHO05D004251 1.1e-25 120.6 145 52.4
ClCG03G000460 Citrullus lanatus HOM05D002034 ORTHO05D004251 1.1e-25 120.6 163 46.0
AT5G58510 Arabidopsis thaliana HOM05D002034 ORTHO05D004251 1.4e-25 120.2 113 61.1
Carub.0008s1910 Capsella rubella HOM05D002034 ORTHO05D004251 1.4e-25 120.2 113 61.1
Cfa011748 Carpinus fangiana HOM05D002034 ORTHO05D004251 1.4e-25 120.2 88 72.7
AL8G34750 Arabidopsis lyrata HOM05D002034 ORTHO05D004251 1.8e-25 119.8 113 61.1
Sp6g20200 Schrenkiella parvula HOM05D002034 ORTHO05D004251 1.8e-25 119.8 116 58.6
MSTRG.8115 Avicennia marina HOM05D002034 ORTHO05D004251 4.0e-25 118.6 130 54.6
BcaB08g36187 Brassica carinata HOM05D002034 ORTHO05D004251 4.0e-25 118.6 114 61.4
BolC3t13874H Brassica oleracea HOM05D002034 ORTHO05D004251 5.3e-25 118.2 113 61.1
Ah.15g096250 Amaranthus hybridus HOM05D002034 ORTHO05D004251 6.9e-25 117.9 92 69.6
PSO801G0069 Papaver somniferum HOM05D002034 ORTHO05D004251 9.0e-25 117.5 81 75.3
HanXRQChr08g0229181 Helianthus annuus HOM05D002034 ORTHO05D004251 1.5e-24 116.7 81 74.1
BcaB01g04520 Brassica carinata HOM05D002034 ORTHO05D004251 2.6e-24 115.9 147 50.3
Thhalv10012586m.g Eutrema salsugineum HOM05D002034 ORTHO05D004251 2.6e-24 115.9 113 59.3
Sabra09G0057900 Salix brachista HOM05D002034 ORTHO05D004251 2.6e-24 115.9 189 43.4
SGA_v2.0_scaffold62G21324 Striga asiatica HOM05D002034 ORTHO05D004251 4.5e-24 115.2 81 72.8
EL10Ac7g15893 Beta vulgaris HOM05D002034 ORTHO05D004251 5.8e-24 114.8 85 74.1
CDE08G0674 Ceratophyllum demersum HOM05D002034 ORTHO05D004251 5.8e-24 114.8 108 54.6
MELO3C020522.2 Cucumis melo HOM05D002034 ORTHO05D004251 7.6e-24 114.4 191 39.3
A03p12200 Brassica napus HOM05D002034 ORTHO05D004251 1.0e-23 114.0 113 59.3
BraA03t10531Z Brassica rapa HOM05D002034 ORTHO05D004251 1.0e-23 114.0 113 59.3
Zm00001eb396860 Zea mays HOM05D002034 ORTHO05D004251 1.7e-23 113.2 82 72.0
Sc12g0000270 Simmondsia chinensis HOM05D002034 ORTHO05D004251 1.1e-22 110.5 85 69.4
Os03g0295700 Oryza sativa ssp. japonica HOM05D002034 ORTHO05D004251 1.4e-22 110.2 82 69.5
ATR0174G009 Amborella trichopoda HOM05D002034 ORTHO05D004251 5.5e-22 108.2 120 54.2
Ciclev10027766m.g Citrus clementina HOM05D002034 ORTHO05D004251 9.3e-22 107.5 141 51.8
Migut.F01663 Erythranthe guttata HOM05D002034 ORTHO05D004251 1.6e-21 106.7 81 70.4
SEGI_18638 Sequoiadendron giganteum HOM05D002034 ORTHO05D004251 7.9e-21 104.4 89 62.9
Nitab4.5_0001115g0080 Nicotiana tabacum HOM05D002034 ORTHO05D004251 5.1e-20 101.7 116 53.4
MSTRG.9115 Avicennia marina HOM05D002034 ORTHO05D004251 1.1e-19 100.5 81 67.9
Nitab4.5_0006148g0070 Nicotiana tabacum HOM05D002034 ORTHO05D004251 5.7e-19 98.2 89 61.8
Nitab4.5_0004155g0040 Nicotiana tabacum HOM05D002034 ORTHO05D004251 1.6e-18 96.7 89 61.8
Atru.chr3.4154 Acer truncatum HOM05D002034 ORTHO05D004251 9.0e-17 90.9 86 57.0
SHI19193 Sapria himalayana HOM05D002034 ORTHO05D004251 2.6e-16 89.4 116 52.6
unitig_736.g22533 Utricularia gibba HOM05D002034 ORTHO05D004251 2.6e-16 89.4 113 48.7
Actinidia38392 Actinidia chinensis HOM05D002034 ORTHO05D004251 1.0e-15 87.4 62 67.7
Peaxi162Scf00808g00111 Petunia axillaris HOM05D002034 ORTHO05D004251 1.4e-14 83.6 70 62.9
Mapoly0006s0080 Marchantia polymorpha HOM05D002034 ORTHO05D004251 2.5e-14 82.8 111 47.7
Potri.001G280832 Populus trichocarpa HOM05D002034 ORTHO05D004251 9.3e-14 80.9 105 46.7
SMO141G0130 Selaginella moellendorffii HOM05D002034 ORTHO05D004251 1.2e-13 80.5 106 46.2
AagrBONN_evm.TU.Sc2ySwM_228.2653 Anthoceros agrestis HOM05D002034 ORTHO05D004251 1.6e-13 80.1 84 54.8
Pp3c22_21020 Physcomitrium patens HOM05D002034 ORTHO05D004251 2.1e-13 79.7 113 42.5
AUR62009695 Chenopodium quinoa HOM05D002034 ORTHO05D004251 1.0e-12 77.4 162 37.0
Actinidia23213 Actinidia chinensis HOM05D002034 ORTHO05D004251 5.1e-12 75.1 76 56.6
Nitab4.5_0001469g0010 Nicotiana tabacum HOM05D002034 ORTHO05D004251 5.7e-11 71.6 79 55.7
AUR62036251 Chenopodium quinoa HOM05D002034 ORTHO05D004251 3.7e-10 68.9 54 66.7
AUR62036252 Chenopodium quinoa HOM05D002034 ORTHO05D004251 3.7e-10 68.9 54 66.7
Hund18961 Selenicereus undatus HOM05D002034 ORTHO05D004251 3.7e-10 68.9 54 64.8
HPP92_012001 Vanilla planifolia HOM05D002034 ORTHO05D004251 2.4e-09 66.2 56 58.9
Lsat_1_v5_gn_5_109060 Lactuca sativa HOM05D004503 ORTHO05D005460 5.3e-09 65.1 71 49.3
Actinidia14799 Actinidia chinensis HOM05D001100 ORTHO05D056588 1.2e-08 63.9 45 68.9
SEGI_15036 Sequoiadendron giganteum HOM05D002034 ORTHO05D004251 1.2e-08 63.9 54 59.3
CBR_g32390 Chara braunii HOM05D002034 ORTHO05D004251 1.3e-07 60.5 91 44.0
CAN.G337.77 Capsicum annuum HOM05D001434 ORTHO05D004586 5.5e-06 55.1 149 31.5
PGSC0003DMG400022311 Solanum tuberosum HOM05D001434 ORTHO05D004586 5.5e-06 55.1 149 31.5
Nitab4.5_0000328g0030 Nicotiana tabacum HOM05D001434 ORTHO05D004586 9.4e-06 54.3 104 37.5
Nitab4.5_0002287g0060 Nicotiana tabacum HOM05D001434 ORTHO05D004586 9.4e-06 54.3 149 32.9

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (7 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (0 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (0 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (6 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings