Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038581 Camellia sinensis var. sinensis HOM05D005070 ORTHO05D005987 4.5e-60 234.6 132 100.0
Actinidia33046 Actinidia chinensis HOM05D005070 ORTHO05D005987 1.3e-38 163.3 110 78.2
CSS0001011 Camellia sinensis var. sinensis HOM05D005070 ORTHO05D005987 2.2e-38 162.5 101 80.2
Actinidia19084 Actinidia chinensis HOM05D005070 ORTHO05D005987 6.3e-38 161.0 103 80.6
Dinv09171 Davidia involucrata HOM05D005070 ORTHO05D005987 8.2e-38 160.6 109 78.0
Hma1.2p1_0002F.1_g002700 Hydrangea macrophylla HOM05D005070 ORTHO05D005987 2.0e-36 156.0 103 77.7
GSVIVG01007813001 Vitis vinifera HOM05D005070 ORTHO05D005987 1.0e-35 153.7 101 78.2
Dinv20690 Davidia involucrata HOM05D005070 ORTHO05D005987 1.3e-35 153.3 103 80.6
CiPaw.12G023900 Carya illinoinensis HOM05D005070 ORTHO05D005987 7.2e-34 147.5 104 76.0
Manes.06G101800 Manihot esculenta HOM05D005070 ORTHO05D005987 7.2e-34 147.5 103 74.8
Hma1.2p1_1643F.1_g295270 Hydrangea macrophylla HOM05D005070 ORTHO05D005987 1.2e-33 146.7 103 77.7
Hma1.2p1_2351F.1_g320498 Hydrangea macrophylla HOM05D005070 ORTHO05D005987 1.2e-33 146.7 103 77.7
TWI32G1183 Tripterygium wilfordii HOM05D005070 ORTHO05D005987 4.6e-33 144.8 98 73.5
Cfa019078 Carpinus fangiana HOM05D005070 ORTHO05D005987 1.8e-32 142.9 106 72.6
Potri.015G072100 Populus trichocarpa HOM05D005070 ORTHO05D005987 2.3e-32 142.5 105 71.4
Manes.06G101600 Manihot esculenta HOM05D005070 ORTHO05D005987 3.9e-32 141.7 103 71.8
Ciclev10024649m.g Citrus clementina HOM05D005070 ORTHO05D005987 1.5e-31 139.8 101 72.3
TAR371G1219 Trochodendron aralioides HOM05D005070 ORTHO05D005987 2.5e-31 139.0 102 68.6
MD14G1185300 Malus domestica HOM05D005070 ORTHO05D005987 4.3e-31 138.3 101 71.3
arahy.Tifrunner.gnm1.ann1.LKK6LB Arachis hypogaea HOM05D005070 ORTHO05D005987 9.7e-31 137.1 97 71.1
Prupe.5G178000 Prunus persica HOM05D005070 ORTHO05D005987 1.3e-30 136.7 101 70.3
Potri.012G077101 Populus trichocarpa HOM05D005070 ORTHO05D005987 3.7e-30 135.2 100 73.0
Nn3g16981 Nelumbo nucifera HOM05D005070 ORTHO05D005987 8.2e-30 134.0 100 67.0
CANSAT80G1974 Cannabis sativa HOM05D005070 ORTHO05D005987 1.1e-29 133.7 98 70.4
Lalb_Chr23g0273091 Lupinus albus HOM05D005070 ORTHO05D005987 1.4e-29 133.3 97 70.1
Oeu022174.1 Olea europaea HOM05D005070 ORTHO05D005987 2.4e-29 132.5 103 69.9
arahy.Tifrunner.gnm1.ann1.FI7QKA Arachis hypogaea HOM05D005070 ORTHO05D005987 3.1e-29 132.1 97 70.1
MSTRG.4382 Avicennia marina HOM05D005070 ORTHO05D005987 3.1e-29 132.1 103 69.9
Cc04_g13080 Coffea canephora HOM05D005070 ORTHO05D005987 3.1e-29 132.1 103 69.9
TWI34G0241 Tripterygium wilfordii HOM05D005070 ORTHO05D005987 3.1e-29 132.1 98 71.4
CANSAT35G0192 Cannabis sativa HOM05D005070 ORTHO05D005987 4.1e-29 131.7 98 69.4
CsaV3_1G001750 Cucumis sativus L. HOM05D005070 ORTHO05D005987 4.1e-29 131.7 98 69.4
TAR629G1223 Trochodendron aralioides HOM05D005070 ORTHO05D005987 4.1e-29 131.7 98 70.4
QL10p013399 Quercus lobata HOM05D005070 ORTHO05D005987 5.3e-29 131.3 101 68.3
Solyc06g073360.3 Solanum lycopersicum HOM05D005070 ORTHO05D005987 1.2e-28 130.2 103 73.8
Sopen06g029740 Solanum pennellii HOM05D005070 ORTHO05D005987 1.2e-28 130.2 103 73.8
Nitab4.5_0003132g0040 Nicotiana tabacum HOM05D005070 ORTHO05D005987 1.5e-28 129.8 110 69.1
AT5G62575 Arabidopsis thaliana HOM05D005070 ORTHO05D005987 2.0e-28 129.4 94 71.3
Nitab4.5_0005570g0060 Nicotiana tabacum HOM05D005070 ORTHO05D005987 2.0e-28 129.4 112 67.9
Migut.D01788 Erythranthe guttata HOM05D005070 ORTHO05D005987 4.5e-28 128.3 103 69.9
PGR083G2074 Punica granatum HOM05D005070 ORTHO05D005987 4.5e-28 128.3 100 72.0
unitig_0.g791 Utricularia gibba HOM05D005070 ORTHO05D005987 7.7e-28 127.5 103 68.0
MSTRG.9667 Avicennia marina HOM05D005070 ORTHO05D005987 1.0e-27 127.1 103 68.9
Sed0009180 Sechium edule HOM05D005070 ORTHO05D005987 1.7e-27 126.3 96 64.6
Sabra12G0055200 Salix brachista HOM05D005070 ORTHO05D005987 2.9e-27 125.6 85 71.8
THA.LOC104819433 Tarenaya hassleriana HOM05D005070 ORTHO05D005987 3.8e-27 125.2 95 65.3
Ca_16205_v3 Cicer arietinum L. HOM05D000612 ORTHO05D005987 5.0e-27 124.8 97 66.0
Thecc.03G005900 Theobroma cacao HOM05D005070 ORTHO05D005987 5.0e-27 124.8 104 63.5
Nn4g22889 Nelumbo nucifera HOM05D005070 ORTHO05D005987 6.5e-27 124.4 98 67.3
Oeu016348.1 Olea europaea HOM05D005070 ORTHO05D005987 6.5e-27 124.4 103 68.0
Phvul.009G181300 Phaseolus vulgaris HOM05D005070 ORTHO05D005987 6.5e-27 124.4 97 69.1
TPR.G15088 Trifolium pratense HOM05D005070 ORTHO05D005987 8.5e-27 124.0 98 66.3
CARHR156530 Cardamine hirsuta HOM05D005070 ORTHO05D005987 1.1e-26 123.6 103 65.0
Thhalv10005150m.g Eutrema salsugineum HOM05D005070 ORTHO05D005987 1.1e-26 123.6 103 65.0
THA.LOC104821444 Tarenaya hassleriana HOM05D005070 ORTHO05D005987 1.9e-26 122.9 97 61.9
MD06G1180200 Malus domestica HOM05D005070 ORTHO05D005987 2.5e-26 122.5 98 66.3
Sc04g0002050 Simmondsia chinensis HOM05D005070 ORTHO05D005987 2.5e-26 122.5 106 63.2
Eucgr.B00344 Eucalyptus grandis HOM05D005070 ORTHO05D005987 4.2e-26 121.7 102 63.7
RcHm_v2.0_Chr7g0179591 Rosa chinensis HOM05D005070 ORTHO05D005987 4.2e-26 121.7 97 62.9
Carub.0008s2325 Capsella rubella HOM05D005070 ORTHO05D005987 9.4e-26 120.6 103 65.0
Lalb_Chr11g0071141 Lupinus albus HOM05D005070 ORTHO05D005987 9.4e-26 120.6 97 66.0
Rhsim12G0162300 Rhododendron simsii HOM05D005070 ORTHO05D005987 9.4e-26 120.6 138 55.8
Medtr3g078310 Medicago truncatula HOM05D005070 ORTHO05D005987 1.2e-25 120.2 97 66.0
Phvul.009G149950 Phaseolus vulgaris HOM05D005070 ORTHO05D005987 1.2e-25 120.2 97 68.0
Peaxi162Scf00375g00418 Petunia axillaris HOM05D005070 ORTHO05D005987 1.6e-25 119.8 104 67.3
Sed0013294 Sechium edule HOM05D005070 ORTHO05D005987 1.6e-25 119.8 102 63.7
TAR622G0050 Trochodendron aralioides HOM05D005070 ORTHO05D005987 1.6e-25 119.8 83 71.1
Carub.0005s1395 Capsella rubella HOM05D005070 ORTHO05D005987 2.1e-25 119.4 103 65.0
MELO3C017115.2 Cucumis melo HOM05D005070 ORTHO05D005987 2.1e-25 119.4 101 62.4
Duzib068G0746 Durio zibethinus HOM05D005070 ORTHO05D005987 2.1e-25 119.4 101 64.4
Lj1g0020478 Lotus japonicus HOM05D005070 ORTHO05D005987 2.1e-25 119.4 97 68.0
Aqoxy3G03084 Aquilegia oxysepala HOM05D005070 ORTHO05D005987 2.7e-25 119.0 97 67.0
Psat5g113840 Pisum sativum HOM05D005070 ORTHO05D005987 3.6e-25 118.6 97 63.9
Atru.chr9.2417 Acer truncatum HOM05D005070 ORTHO05D005987 4.7e-25 118.2 96 67.7
CARHR276360 Cardamine hirsuta HOM05D005070 ORTHO05D005987 4.7e-25 118.2 91 67.0
Duzib205G1171 Durio zibethinus HOM05D005070 ORTHO05D005987 7.9e-25 117.5 98 64.3
Thhalv10010853m.g Eutrema salsugineum HOM05D005070 ORTHO05D005987 1.4e-24 116.7 104 60.6
FvH4_5g16500 Fragaria vesca HOM05D005070 ORTHO05D005987 3.9e-24 115.2 98 61.2
FAN04G3047 Fragaria x ananassa HOM05D005070 ORTHO05D005987 3.9e-24 115.2 98 61.2
FAN13G2199 Fragaria x ananassa HOM05D005070 ORTHO05D005987 3.9e-24 115.2 98 61.2
Sp2g25760 Schrenkiella parvula HOM05D005070 ORTHO05D005987 6.7e-24 114.4 105 61.0
Hund09411 Selenicereus undatus HOM05D005070 ORTHO05D005987 6.7e-24 114.4 110 55.5
FAN18G1077 Fragaria x ananassa HOM05D005070 ORTHO05D005987 8.8e-24 114.0 98 60.2
TPR.G17706 Trifolium pratense HOM05D005070 ORTHO05D005987 1.1e-23 113.6 97 62.9
Glyma.04G179700 Glycine max HOM05D005070 ORTHO05D005987 1.5e-23 113.2 96 61.5
Gohir.A12G276360 Gossypium hirsutum HOM05D005070 ORTHO05D005987 2.0e-23 112.8 104 59.6
MBI02_g26995_MAGBIO Magnolia biondii HOM05D005070 ORTHO05D005987 2.0e-23 112.8 75 70.7
FAN08G0574 Fragaria x ananassa HOM05D005070 ORTHO05D005987 3.3e-23 112.1 98 60.2
SGA_v2.0_scaffold7G04113 Striga asiatica HOM05D007129 ORTHO05D008680 4.4e-23 111.7 103 61.2
ATR1149G117 Amborella trichopoda HOM05D005070 ORTHO05D005987 5.7e-23 111.3 65 75.4
AL5G27130 Arabidopsis lyrata HOM05D005070 ORTHO05D005987 5.7e-23 111.3 103 64.1
Glyma.06G185100 Glycine max HOM05D005070 ORTHO05D005987 9.7e-23 110.5 96 60.4
Gohir.D12G277200 Gossypium hirsutum HOM05D005070 ORTHO05D005987 1.3e-22 110.2 104 56.7
Gorai.008G297700 Gossypium raimondii HOM05D005070 ORTHO05D005987 1.3e-22 110.2 104 58.7
COL.COLO4_04329 Corchorus olitorius HOM05D005070 ORTHO05D005987 2.2e-22 109.4 98 58.2
Hma1.2p1_1643F.1_g295260 Hydrangea macrophylla HOM05D005070 ORTHO05D005987 2.2e-22 109.4 79 75.9
Hma1.2p1_2351F.1_g320497 Hydrangea macrophylla HOM05D005070 ORTHO05D005987 2.2e-22 109.4 79 75.9
Haze_07448 Corylus avellana HOM05D005070 ORTHO05D005987 3.7e-22 108.6 79 70.9
AT3G47833 Arabidopsis thaliana HOM05D005070 ORTHO05D005987 4.8e-22 108.2 93 64.5
Lsat_1_v5_gn_4_72681 Lactuca sativa HOM05D005070 ORTHO05D005987 1.8e-21 106.3 103 56.3
Aa31LG4G16490 Aethionema arabicum HOM05D007129 ORTHO05D008680 3.1e-21 105.5 92 57.6
BcaB01g00872 Brassica carinata HOM05D005070 ORTHO05D005987 4.1e-21 105.1 94 57.4
BcaB02g10688 Brassica carinata HOM05D005070 ORTHO05D005987 1.2e-20 103.6 92 57.6
BcaC01g01772 Brassica carinata HOM05D005070 ORTHO05D005987 1.5e-20 103.2 97 55.7
A06p19790 Brassica napus HOM05D005070 ORTHO05D005987 1.5e-20 103.2 94 57.4
BraA06t25059Z Brassica rapa HOM05D005070 ORTHO05D005987 1.5e-20 103.2 94 57.4
BolC3t19504H Brassica oleracea HOM05D005070 ORTHO05D005987 2.6e-20 102.4 94 56.4
CDE10G1084 Ceratophyllum demersum HOM05D005070 ORTHO05D005987 2.6e-20 102.4 98 52.0
DCAR_031298 Daucus carota HOM05D005070 ORTHO05D005987 3.4e-20 102.1 94 60.6
C03p72060 Brassica napus HOM05D005070 ORTHO05D005987 4.5e-20 101.7 94 56.4
HanXRQChr09g0271731 Helianthus annuus HOM05D005070 ORTHO05D005987 4.5e-20 101.7 96 56.2
arahy.Tifrunner.gnm1.ann1.K5B2QX Arachis hypogaea HOM05D005070 ORTHO05D005987 2.2e-19 99.4 108 53.7
ClCG06G016770 Citrullus lanatus HOM05D005070 ORTHO05D005987 2.2e-19 99.4 78 69.2
arahy.Tifrunner.gnm1.ann1.HW74CG Arachis hypogaea HOM05D005070 ORTHO05D005987 3.8e-19 98.6 108 53.7
BcaC01g02293 Brassica carinata HOM05D005070 ORTHO05D005987 5.0e-19 98.2 92 55.4
C03p66960 Brassica napus HOM05D005070 ORTHO05D005987 5.0e-19 98.2 92 55.4
BolC3t18969H Brassica oleracea HOM05D005070 ORTHO05D005987 5.0e-19 98.2 92 55.4
EL10Ac5g10819 Beta vulgaris HOM05D005070 ORTHO05D005987 4.2e-18 95.1 90 54.4
HanXRQChr16g0503551 Helianthus annuus HOM05D005070 ORTHO05D005987 5.5e-18 94.7 90 53.3
CDE10G1207 Ceratophyllum demersum HOM05D005070 ORTHO05D005987 1.6e-17 93.2 88 55.7
SalBow3G2397 Salvia bowleyana HOM05D005070 ORTHO05D005987 4.7e-17 91.7 78 64.1
Psat7g153800 Pisum sativum HOM05D005070 ORTHO05D005987 8.0e-17 90.9 79 62.0
ECA232G1832 Erigeron canadensis HOM05D005070 ORTHO05D005987 1.0e-16 90.5 67 59.7
DCAR_026116 Daucus carota HOM05D000306 ORTHO05D005987 3.0e-16 89.0 74 62.2
Psat7g156680 Pisum sativum HOM05D005070 ORTHO05D005987 3.9e-16 88.6 78 61.5
Manes.14G069501 Manihot esculenta HOM05D005070 ORTHO05D005987 5.2e-16 88.2 99 51.5
PSO832G4075 Papaver somniferum HOM05D005070 ORTHO05D005987 6.7e-16 87.8 87 51.7
PSO017G3759 Papaver somniferum HOM05D005070 ORTHO05D005987 8.8e-16 87.4 91 50.5
HPP92_017066 Vanilla planifolia HOM05D005070 ORTHO05D005987 1.1e-15 87.0 92 50.0
PSO478G4659 Papaver somniferum HOM05D005070 ORTHO05D005987 2.0e-15 86.3 91 49.5
PSO063G7000 Papaver somniferum HOM05D005070 ORTHO05D005987 1.7e-14 83.2 87 50.6
AUR62008276 Chenopodium quinoa HOM05D005070 ORTHO05D005987 4.1e-13 78.6 98 46.9
SEGI_14877 Sequoiadendron giganteum HOM05D005070 ORTHO05D005987 4.5e-12 75.1 75 52.0
arahy.Tifrunner.gnm1.ann1.67M40U Arachis hypogaea HOM05D005070 ORTHO05D005987 2.2e-11 72.8 53 64.2
PGSC0003DMG400027010 Solanum tuberosum HOM05D000366 ORTHO05D001950 2.2e-11 72.8 68 66.2
C08p19280 Brassica napus HOM05D000130 ORTHO05D000257 2.9e-11 72.4 73 52.1
MBI18_g17201_MAGBIO Magnolia biondii HOM05D002807 ORTHO05D005987 2.9e-11 72.4 56 64.3
BolC8t49547H Brassica oleracea HOM05D000130 ORTHO05D000001 2.5e-10 69.3 61 54.1
HPP92_017347 Vanilla planifolia HOM05D005070 ORTHO05D005987 4.2e-10 68.6 61 50.8
CSS0046931 Camellia sinensis var. sinensis HOM05D005070 ORTHO05D005987 5.5e-10 68.2 34 94.1
Mapoly0038s0062 Marchantia polymorpha HOM05D005070 ORTHO05D005987 9.4e-10 67.4 61 52.5
Os09g0382500 Oryza sativa ssp. japonica HOM05D005070 ORTHO05D005987 2.1e-09 66.2 90 44.4
Zm00001eb098990 Zea mays HOM05D005070 ORTHO05D005987 3.6e-09 65.5 58 50.0
Zm00001eb311750 Zea mays HOM05D005070 ORTHO05D005987 3.6e-09 65.5 85 42.4
MBI03_g02704_MAGBIO Magnolia biondii HOM05D001642 ORTHO05D010488 5.2e-08 61.6 37 75.7
MBI05_g13276_MAGBIO Magnolia biondii HOM05D001642 ORTHO05D010488 6.7e-08 61.2 34 82.4
MBI08_g15145_MAGBIO Magnolia biondii HOM05D002807 ORTHO05D004199 6.7e-08 61.2 74 48.6
MBI15_g16478_MAGBIO Magnolia biondii HOM05D005070 ORTHO05D005987 6.7e-08 61.2 36 80.6
AagrBONN_evm.TU.Sc2ySwM_344.5276 Anthoceros agrestis HOM05D005070 ORTHO05D005987 1.7e-06 56.6 66 45.5
AagrBONN_evm.TU.Sc2ySwM_362.1955 Anthoceros agrestis HOM05D005070 ORTHO05D005987 2.8e-06 55.8 66 43.9
CBR_g34554 Chara braunii HOM05D005070 ORTHO05D005987 2.8e-06 55.8 46 58.7
Pp3c7_6970 Physcomitrium patens HOM05D005070 ORTHO05D005987 2.8e-06 55.8 71 43.7

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (2 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (5 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (3 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (2 genes)
Capsella rubella (2 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (2 genes)
Carica papaya (0 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (5 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (6 genes)
Malus domestica (2 genes)
Manihot esculenta (3 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (4 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (1 genes)
Pisum sativum (3 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (2 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings