Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012878 Camellia sinensis var. sinensis HOM05D006729 ORTHO05D008502 3.3e-90 335.1 180 100.0
CSS0038118 Camellia sinensis var. sinensis HOM05D006729 ORTHO05D008502 3.3e-90 335.1 180 100.0
Actinidia06196 Actinidia chinensis HOM05D006729 ORTHO05D008502 2.7e-60 235.7 158 82.9
Nn2g14459 Nelumbo nucifera HOM05D006729 ORTHO05D008502 1.0e-59 233.8 158 81.0
Actinidia07956 Actinidia chinensis HOM05D006729 ORTHO05D008502 2.3e-59 232.6 158 81.0
Dinv25092 Davidia involucrata HOM05D006729 ORTHO05D008502 4.8e-57 224.9 158 79.7
Cpa.g.sc85.5 Carica papaya HOM05D006729 ORTHO05D008502 8.2e-57 224.2 159 77.4
Hma1.2p1_0304F.1_g119210 Hydrangea macrophylla HOM05D006729 ORTHO05D008502 8.2e-57 224.2 158 77.8
Rhsim04G0130300 Rhododendron simsii HOM05D006729 ORTHO05D008502 8.2e-57 224.2 158 78.5
Hma1.2p1_0304F.1_g119200 Hydrangea macrophylla HOM05D006729 ORTHO05D008502 1.1e-56 223.8 157 78.3
Gohir.A09G131400 Gossypium hirsutum HOM05D006729 ORTHO05D008502 1.4e-56 223.4 157 77.1
Gohir.D09G127700 Gossypium hirsutum HOM05D006729 ORTHO05D008502 1.4e-56 223.4 157 77.1
Atru.BG.227.p Acer truncatum HOM05D006729 ORTHO05D008502 1.8e-56 223.0 158 75.9
Cc06_g07110 Coffea canephora HOM05D006729 ORTHO05D008502 2.4e-56 222.6 158 75.9
Gorai.006G146200 Gossypium raimondii HOM05D006729 ORTHO05D008502 2.4e-56 222.6 157 76.4
CiPaw.09G025400 Carya illinoinensis HOM05D006729 ORTHO05D008502 3.1e-56 222.2 159 76.1
GSVIVG01022493001 Vitis vinifera HOM05D006729 ORTHO05D008502 3.1e-56 222.2 159 76.7
Aqoxy1G00566 Aquilegia oxysepala HOM05D006729 ORTHO05D008502 5.3e-56 221.5 158 74.7
Haze_20087 Corylus avellana HOM05D006729 ORTHO05D008502 5.3e-56 221.5 159 76.7
FvH4_6g21260 Fragaria vesca HOM05D006729 ORTHO05D008502 1.5e-55 219.9 158 75.3
FAN14G3257 Fragaria x ananassa HOM05D006729 ORTHO05D008502 1.5e-55 219.9 158 75.3
Thecc.05G181500 Theobroma cacao HOM05D006729 ORTHO05D008502 1.5e-55 219.9 157 77.7
QL07p025843 Quercus lobata HOM05D006729 ORTHO05D008502 2.6e-55 219.2 159 74.2
Sc01g0005190 Simmondsia chinensis HOM05D006729 ORTHO05D008502 2.6e-55 219.2 158 75.9
Potri.006G197900 Populus trichocarpa HOM05D006729 ORTHO05D008502 4.5e-55 218.4 159 74.2
TAR623G1267 Trochodendron aralioides HOM05D006729 ORTHO05D008502 5.9e-55 218.0 158 76.6
Glyma.19G204000 Glycine max HOM05D006729 ORTHO05D008502 7.7e-55 217.6 159 76.1
FAN05G4950 Fragaria x ananassa HOM05D006729 ORTHO05D008502 1.3e-54 216.9 158 73.4
Oeu044686.1 Olea europaea HOM05D006729 ORTHO05D008502 1.3e-54 216.9 159 73.6
VMungo1383G1163 Vigna mungo HOM05D006729 ORTHO05D008502 1.3e-54 216.9 158 76.6
EL10Ac5g11780 Beta vulgaris HOM05D006729 ORTHO05D008502 1.7e-54 216.5 158 72.8
Duzib093G0804 Durio zibethinus HOM05D006729 ORTHO05D008502 1.7e-54 216.5 157 76.4
RcHm_v2.0_Chr3g0477721 Rosa chinensis HOM05D006729 ORTHO05D008502 1.7e-54 216.5 158 74.7
Glyma.03G206200 Glycine max HOM05D006729 ORTHO05D008502 2.2e-54 216.1 159 75.5
Sabra06G0152300 Salix brachista HOM05D006729 ORTHO05D008502 3.8e-54 215.3 159 74.2
Lj1g0010305 Lotus japonicus HOM05D006729 ORTHO05D008502 5.0e-54 214.9 159 75.5
THA.LOC104802817 Tarenaya hassleriana HOM05D006729 ORTHO05D008502 5.0e-54 214.9 159 71.1
Lalb_Chr20g0111151 Lupinus albus HOM05D006729 ORTHO05D008502 6.5e-54 214.5 159 73.6
CDE10G0526 Ceratophyllum demersum HOM05D006729 ORTHO05D008502 8.5e-54 214.2 158 74.1
Manes.08G038800 Manihot esculenta HOM05D006729 ORTHO05D008502 1.1e-53 213.8 159 73.6
Phvul.001G199900 Phaseolus vulgaris HOM05D006729 ORTHO05D008502 1.1e-53 213.8 159 75.5
COL.COLO4_29456 Corchorus olitorius HOM05D006729 ORTHO05D008502 1.4e-53 213.4 156 75.6
HanXRQChr01g0026291 Helianthus annuus HOM05D006729 ORTHO05D008502 1.4e-53 213.4 158 71.5
MD12G1049100 Malus domestica HOM05D006729 ORTHO05D008502 1.4e-53 213.4 155 76.1
TWI53G1785 Tripterygium wilfordii HOM05D006729 ORTHO05D008502 1.4e-53 213.4 158 74.7
CiPaw.10G022200 Carya illinoinensis HOM05D006729 ORTHO05D008502 2.5e-53 212.6 159 72.3
Ca_09095_v3 Cicer arietinum L. HOM05D006729 ORTHO05D008502 2.5e-53 212.6 159 74.2
Lsat_1_v5_gn_1_56360 Lactuca sativa HOM05D006729 ORTHO05D008502 2.5e-53 212.6 158 70.9
TPR.G32290 Trifolium pratense HOM05D006729 ORTHO05D008502 3.2e-53 212.2 159 75.5
ECA248G1919 Erigeron canadensis HOM05D006729 ORTHO05D008502 5.5e-53 211.5 157 71.3
HPP92_017665 Vanilla planifolia HOM05D006729 ORTHO05D008502 7.2e-53 211.1 157 72.0
Solyc10g081600.2 Solanum lycopersicum HOM05D006729 ORTHO05D008502 9.4e-53 210.7 158 73.4
Sopen10g032110 Solanum pennellii HOM05D006729 ORTHO05D008502 9.4e-53 210.7 158 73.4
SGA_v2.0_scaffold392G50667 Striga asiatica HOM05D006729 ORTHO05D008502 9.4e-53 210.7 158 71.5
Prupe.7G087100 Prunus persica HOM05D006729 ORTHO05D008502 1.2e-52 210.3 158 73.4
AL5G40220 Arabidopsis lyrata HOM05D006729 ORTHO05D008502 1.6e-52 209.9 159 69.8
AT3G58460 Arabidopsis thaliana HOM05D006729 ORTHO05D008502 1.6e-52 209.9 159 69.2
BolC8t50983H Brassica oleracea HOM05D006729 ORTHO05D008502 1.6e-52 209.9 157 70.7
CAN.G128.158 Capsicum annuum HOM05D006729 ORTHO05D008502 1.6e-52 209.9 158 72.8
CARHR168850 Cardamine hirsuta HOM05D006729 ORTHO05D008502 2.1e-52 209.5 159 69.8
Sp5g04420 Schrenkiella parvula HOM05D006729 ORTHO05D008502 2.7e-52 209.1 159 69.8
Nitab4.5_0008653g0030 Nicotiana tabacum HOM05D006729 ORTHO05D008502 3.6e-52 208.8 158 74.7
A09p51030 Brassica napus HOM05D006729 ORTHO05D008502 4.7e-52 208.4 157 70.1
AUR62038406 Chenopodium quinoa HOM05D006729 ORTHO05D008502 6.1e-52 208.0 158 69.6
BcaC07g40202 Brassica carinata HOM05D006729 ORTHO05D008502 7.9e-52 207.6 157 69.4
Psat0s2632g0080 Pisum sativum HOM05D006729 ORTHO05D008502 7.9e-52 207.6 159 72.3
C08p33850 Brassica napus HOM05D006729 ORTHO05D008502 1.0e-51 207.2 157 69.4
BraA09t40548Z Brassica rapa HOM05D006729 ORTHO05D008502 1.0e-51 207.2 157 69.4
AUR62036295 Chenopodium quinoa HOM05D006729 ORTHO05D008502 1.0e-51 207.2 158 69.6
Migut.L01859 Erythranthe guttata HOM05D006729 ORTHO05D008502 1.0e-51 207.2 158 71.5
PGSC0003DMG400028130 Solanum tuberosum HOM05D006729 ORTHO05D008502 1.0e-51 207.2 158 72.8
Aa31LG10G13030 Aethionema arabicum HOM05D006729 ORTHO05D008502 1.4e-51 206.8 159 68.6
Eucgr.K01887 Eucalyptus grandis HOM05D006729 ORTHO05D008502 1.4e-51 206.8 168 69.0
FAN05G4583 Fragaria x ananassa HOM05D006729 ORTHO05D008502 1.8e-51 206.5 158 70.3
Thhalv10006012m.g Eutrema salsugineum HOM05D006729 ORTHO05D008502 2.3e-51 206.1 159 69.2
FAN02G0869 Fragaria x ananassa HOM05D006729 ORTHO05D008502 2.3e-51 206.1 158 70.9
DCAR_013470 Daucus carota HOM05D006729 ORTHO05D008502 3.0e-51 205.7 158 70.9
PGR142G3090 Punica granatum HOM05D006729 ORTHO05D008502 3.0e-51 205.7 158 70.9
Medtr7g107390 Medicago truncatula HOM05D006729 ORTHO05D008502 3.9e-51 205.3 159 72.3
BcaC07g40257 Brassica carinata HOM05D006729 ORTHO05D008502 5.2e-51 204.9 157 68.8
arahy.Tifrunner.gnm1.ann1.B8V3X4 Arachis hypogaea HOM05D006729 ORTHO05D008502 6.7e-51 204.5 159 71.1
arahy.Tifrunner.gnm1.ann1.Z8UC8R Arachis hypogaea HOM05D006729 ORTHO05D008502 6.7e-51 204.5 159 71.1
Carub.0005s2520 Capsella rubella HOM05D006729 ORTHO05D008502 6.7e-51 204.5 159 67.9
Lalb_Chr25g0287741 Lupinus albus HOM05D006729 ORTHO05D008502 8.8e-51 204.1 158 70.9
Sed0008871 Sechium edule HOM05D006729 ORTHO05D008502 1.5e-50 203.4 159 69.2
ATR0697G123 Amborella trichopoda HOM05D006729 ORTHO05D008502 2.6e-50 202.6 159 68.6
MSTRG.26567 Avicennia marina HOM05D006729 ORTHO05D008502 2.6e-50 202.6 158 71.5
Peaxi162Scf00060g01414 Petunia axillaris HOM05D006729 ORTHO05D008502 5.7e-50 201.4 158 70.3
MBI05_g37660_MAGBIO Magnolia biondii HOM05D006729 ORTHO05D008502 9.7e-50 200.7 158 70.3
CsaV3_4G013460 Cucumis sativus L. HOM05D006729 ORTHO05D008502 2.2e-49 199.5 159 67.9
MELO3C008786.2 Cucumis melo HOM05D006729 ORTHO05D008502 3.7e-49 198.7 159 67.9
PSO339G2226 Papaver somniferum HOM05D006729 ORTHO05D008502 1.8e-48 196.4 159 69.8
Hund15041 Selenicereus undatus HOM05D006729 ORTHO05D008502 2.4e-48 196.1 159 68.6
Ciclev10011870m.g Citrus clementina HOM05D006729 ORTHO05D008502 4.1e-48 195.3 158 69.0
Zm00001eb052940 Zea mays HOM05D006729 ORTHO05D008502 9.1e-48 194.1 158 67.1
PSO384G1090 Papaver somniferum HOM05D006729 ORTHO05D008502 1.2e-47 193.7 159 69.8
ClCG04G005160 Citrullus lanatus HOM05D006729 ORTHO05D008502 2.2e-46 189.5 159 64.8
unitig_746.g26785 Utricularia gibba HOM05D006729 ORTHO05D008502 8.5e-46 187.6 158 62.7
vmacro08860 Vaccinium macrocarpon HOM05D006729 ORTHO05D008502 2.1e-44 183.0 132 78.0
Atru.chr8.1243 Acer truncatum HOM05D006729 ORTHO05D008502 1.4e-43 180.3 151 68.9
Hma1.2p1_0127F.1_g059610 Hydrangea macrophylla HOM05D006729 ORTHO05D008502 5.2e-43 178.3 143 69.9
SEGI_10602 Sequoiadendron giganteum HOM05D006729 ORTHO05D008502 4.4e-42 175.3 157 60.5
Os03g0651100 Oryza sativa ssp. japonica HOM05D006729 ORTHO05D008502 5.0e-38 161.8 137 64.2
SMO364G0815 Selaginella moellendorffii HOM05D006729 ORTHO05D008502 1.5e-37 160.2 157 57.3
Pp3c8_11670 Physcomitrium patens HOM05D006729 ORTHO05D008502 3.0e-35 152.5 152 55.3
CDE07G1895 Ceratophyllum demersum HOM05D006729 ORTHO05D008502 7.5e-34 147.9 113 71.7
Mapoly0022s0048 Marchantia polymorpha HOM05D006729 ORTHO05D008502 9.8e-34 147.5 157 54.1
AagrBONN_evm.TU.Sc2ySwM_228.4371 Anthoceros agrestis HOM05D006729 ORTHO05D008502 1.6e-31 140.2 157 47.1
CBR_g26284 Chara braunii HOM05D006729 ORTHO05D008502 1.3e-25 120.6 153 47.1
MCO15G048 Micromonas commoda HOM05D006729 ORTHO05D008502 1.8e-16 90.1 159 38.4
Lj2g0026947 Lotus japonicus HOM05D006729 ORTHO05D008502 2.4e-16 89.7 100 58.0
Cre01.g050350 Chlamydomonas reinhardtii HOM05D006729 ORTHO05D008502 3.9e-14 82.4 136 35.3
PRCOL_00006238 Prasinoderma coloniale HOM05D006729 ORTHO05D008502 2.0e-07 60.1 160 29.4
SEGI_40739 Sequoiadendron giganteum HOM05D005353 ORTHO05D006248 2.7e-07 59.7 136 34.6
SalBow7G1146 Salvia bowleyana HOM05D005353 ORTHO05D006248 7.8e-07 58.2 137 40.1
Ciclev10021112m.g Citrus clementina HOM05D005353 ORTHO05D006248 1.3e-06 57.4 135 38.5
Lalb_Chr12g0200451 Lupinus albus HOM05D005353 ORTHO05D006248 2.3e-06 56.6 135 38.5
PSO761G0146 Papaver somniferum HOM05D005353 ORTHO05D006248 2.3e-06 56.6 134 38.1
Solyc07g042930.3 Solanum lycopersicum HOM05D005353 ORTHO05D006248 2.3e-06 56.6 135 38.5
Carub.0003s1733 Capsella rubella HOM05D005353 ORTHO05D006248 3.0e-06 56.2 134 35.8
Peaxi162Scf01347g00135 Petunia axillaris HOM05D005353 ORTHO05D006248 3.9e-06 55.8 135 37.8
PSO210G1641 Papaver somniferum HOM05D005353 ORTHO05D006248 5.0e-06 55.5 133 35.3
Sopen07g022530 Solanum pennellii HOM05D005353 ORTHO05D006248 5.0e-06 55.5 135 37.8
CANSAT78G1361 Cannabis sativa HOM05D005353 ORTHO05D006248 6.6e-06 55.1 135 37.8
Cpa.g.sc146.5 Carica papaya HOM05D005353 ORTHO05D006248 6.6e-06 55.1 135 38.5
PGSC0003DMG401013561 Solanum tuberosum HOM05D005353 ORTHO05D006248 6.6e-06 55.1 135 37.8
GSVIVG01017718001 Vitis vinifera HOM05D005353 ORTHO05D006248 6.6e-06 55.1 134 36.6
Atru.chr4.3195 Acer truncatum HOM05D005353 ORTHO05D006248 8.6e-06 54.7 135 35.6
CARHR092930 Cardamine hirsuta HOM05D005353 ORTHO05D006248 8.6e-06 54.7 134 35.1
CBR_g40142 Chara braunii HOM05D005353 ORTHO05D006248 8.6e-06 54.7 150 35.3
Sc10g0003710 Simmondsia chinensis HOM05D005353 ORTHO05D006248 8.6e-06 54.7 136 36.8

Acer truncatum (3 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (2 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (2 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (2 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (3 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (2 genes)
Lupinus albus (3 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (1 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (4 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (2 genes)
Zea mays (1 genes)

Program Settings