Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036785 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 2.5e-122 442.2 231 100.0
CSS0028122 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 1.2e-121 439.9 231 99.1
vmacro12673 Vaccinium macrocarpon HOM05D006960 ORTHO05D008699 2.1e-97 359.4 233 80.7
Actinidia20248 Actinidia chinensis HOM05D000567 ORTHO05D001981 1.0e-96 357.1 217 84.8
Rhsim01G0172900 Rhododendron simsii HOM05D006960 ORTHO05D008699 6.7e-96 354.4 231 80.5
Rhsim04G0222700 Rhododendron simsii HOM05D006960 ORTHO05D008699 1.5e-95 353.2 231 80.1
ECA236G0577 Erigeron canadensis HOM05D006960 ORTHO05D008699 1.9e-90 336.3 231 77.1
Ciclev10022060m.g Citrus clementina HOM05D006960 ORTHO05D008699 3.6e-89 332.0 232 74.6
DCAR_021504 Daucus carota HOM05D006960 ORTHO05D008699 8.0e-89 330.9 235 74.9
QL04p060559 Quercus lobata HOM05D006960 ORTHO05D008699 8.0e-89 330.9 230 77.0
Atru.chr5.678 Acer truncatum HOM05D006960 ORTHO05D008699 1.0e-88 330.5 231 75.3
Haze_15666 Corylus avellana HOM05D000451 ORTHO05D000351 1.8e-88 329.7 226 77.0
ClCG09G009460 Citrullus lanatus HOM05D006960 ORTHO05D008699 5.2e-88 328.2 230 74.3
TAR629G1073 Trochodendron aralioides HOM05D006960 ORTHO05D008699 1.2e-87 327.0 231 74.5
Gohir.D11G102000 Gossypium hirsutum HOM05D006960 ORTHO05D008699 4.4e-87 325.1 251 68.5
Thecc.01G341400 Theobroma cacao HOM05D006960 ORTHO05D008699 5.7e-87 324.7 251 68.1
Gorai.007G109000 Gossypium raimondii HOM05D006960 ORTHO05D008699 7.5e-87 324.3 251 68.1
Sed0021558 Sechium edule HOM05D006960 ORTHO05D008699 7.5e-87 324.3 231 71.9
Gohir.A11G097200 Gossypium hirsutum HOM05D006960 ORTHO05D008699 2.8e-86 322.4 251 68.1
COL.COLO4_21448 Corchorus olitorius HOM05D006960 ORTHO05D008699 3.7e-86 322.0 250 68.4
Potri.014G099500 Populus trichocarpa HOM05D006960 ORTHO05D008699 8.3e-86 320.9 248 68.5
Prupe.2G189500 Prunus persica HOM05D006960 ORTHO05D008699 1.1e-85 320.5 231 72.7
PGSC0003DMG400007011 Solanum tuberosum HOM05D006960 ORTHO05D008699 1.8e-85 319.7 235 73.2
MELO3C024139.2 Cucumis melo HOM05D006960 ORTHO05D008699 2.4e-85 319.3 230 72.6
Dinv22299 Davidia involucrata HOM05D006960 ORTHO05D008699 4.1e-85 318.5 215 79.1
Nitab4.5_0004506g0020 Nicotiana tabacum HOM05D006960 ORTHO05D008699 9.1e-85 317.4 234 73.5
CAN.G1178.29 Capsicum annuum HOM05D006960 ORTHO05D008699 1.6e-84 316.6 235 73.2
Nitab4.5_0000258g0220 Nicotiana tabacum HOM05D006960 ORTHO05D008699 2.0e-84 316.2 234 73.1
FvH4_7g16680 Fragaria vesca HOM05D006960 ORTHO05D008699 3.5e-84 315.5 234 72.6
FAN06G3195 Fragaria x ananassa HOM05D006960 ORTHO05D008699 5.9e-84 314.7 234 72.2
HanXRQChr06g0170731 Helianthus annuus HOM05D006960 ORTHO05D008699 5.9e-84 314.7 222 74.3
TWI14G0597 Tripterygium wilfordii HOM05D006960 ORTHO05D008699 5.9e-84 314.7 252 67.5
Sopen05g029010 Solanum pennellii HOM05D006960 ORTHO05D008699 7.7e-84 314.3 236 72.9
FAN01G3090 Fragaria x ananassa HOM05D006960 ORTHO05D008699 1.0e-83 313.9 234 72.2
FAN10G0984 Fragaria x ananassa HOM05D006960 ORTHO05D008699 1.0e-83 313.9 234 71.8
Lsat_1_v5_gn_8_13101 Lactuca sativa HOM05D006960 ORTHO05D008699 1.0e-83 313.9 235 72.8
MSTRG.17349 Avicennia marina HOM05D006960 ORTHO05D008699 5.0e-83 311.6 233 70.0
FAN06G2002 Fragaria x ananassa HOM05D006960 ORTHO05D008699 6.5e-83 311.2 233 71.2
CANSAT56G1276 Cannabis sativa HOM05D006960 ORTHO05D008699 8.6e-83 310.8 232 72.0
Solyc05g050570.3 Solanum lycopersicum HOM05D006960 ORTHO05D008699 8.6e-83 310.8 225 74.2
Manes.05G022300 Manihot esculenta HOM05D006960 ORTHO05D008699 1.9e-82 309.7 251 66.1
MD07G1150800 Malus domestica HOM05D006960 ORTHO05D008699 2.5e-82 309.3 232 71.6
GSVIVG01027159001 Vitis vinifera HOM05D006960 ORTHO05D008699 2.5e-82 309.3 231 71.4
Lalb_Chr06g0163941 Lupinus albus HOM05D006960 ORTHO05D008699 3.3e-82 308.9 227 70.5
Aqoxy6G00316 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 1.6e-81 306.6 231 71.9
Oeu007886.1 Olea europaea HOM05D006960 ORTHO05D008699 6.1e-81 304.7 236 69.5
Oeu014974.1 Olea europaea HOM05D006960 ORTHO05D008699 6.1e-81 304.7 236 69.5
FAN10G4095 Fragaria x ananassa HOM05D006960 ORTHO05D008699 1.4e-80 303.5 226 71.7
EL10Ac1g00259 Beta vulgaris HOM05D006960 ORTHO05D008699 4.0e-80 302.0 229 67.7
Eucgr.E00049 Eucalyptus grandis HOM05D006960 ORTHO05D008699 5.2e-80 301.6 231 70.1
Cpa.g.sc46.111 Carica papaya HOM05D006960 ORTHO05D008699 2.0e-79 299.7 234 67.5
RcHm_v2.0_Chr1g0359831 Rosa chinensis HOM05D006960 ORTHO05D008699 2.0e-79 299.7 235 69.4
Glyma.20G102700 Glycine max HOM05D006960 ORTHO05D008699 3.4e-79 298.9 226 70.8
Cc01_g12480 Coffea canephora HOM05D006960 ORTHO05D008699 4.4e-79 298.5 234 69.2
Lj5g0001318 Lotus japonicus HOM05D006960 ORTHO05D008699 7.5e-79 297.7 227 70.0
PSO063G6262 Papaver somniferum HOM05D006960 ORTHO05D008699 7.5e-79 297.7 234 68.8
PGR142G3971 Punica granatum HOM05D006960 ORTHO05D008699 1.7e-78 296.6 238 66.8
VMungo0720G2201 Vigna mungo HOM05D006960 ORTHO05D008699 7.0e-77 291.2 226 69.0
AUR62004502 Chenopodium quinoa HOM05D006960 ORTHO05D008699 1.2e-76 290.4 232 65.5
Migut.B01880 Erythranthe guttata HOM05D006960 ORTHO05D008699 5.9e-76 288.1 236 68.6
Peaxi162Scf00716g00022 Petunia axillaris HOM05D006960 ORTHO05D008699 5.9e-76 288.1 201 75.6
Psat6g234040 Pisum sativum HOM05D006960 ORTHO05D008699 2.3e-75 286.2 227 67.4
Ca_11259_v3 Cicer arietinum L. HOM05D006960 ORTHO05D008699 3.8e-75 285.4 227 67.8
Sc01g0002630 Simmondsia chinensis HOM05D000016 ORTHO05D007083 3.8e-75 285.4 232 64.7
SGA_v2.0_scaffold22G09984 Striga asiatica HOM05D006960 ORTHO05D008699 6.6e-75 284.6 235 67.7
Phvul.007G014400 Phaseolus vulgaris HOM05D006960 ORTHO05D008699 3.3e-74 282.3 226 68.1
SalBow3G0783 Salvia bowleyana HOM05D006960 ORTHO05D008699 3.3e-74 282.3 235 66.4
CAN.G1385.4 Capsicum annuum HOM05D006960 ORTHO05D008699 9.5e-74 280.8 198 75.3
PSO170G4910 Papaver somniferum HOM05D006960 ORTHO05D008699 6.1e-73 278.1 224 67.4
BraA09t42243Z Brassica rapa HOM05D006960 ORTHO05D008699 1.0e-72 277.3 239 63.2
MBI06_g44795_MAGBIO Magnolia biondii HOM05D006960 ORTHO05D008699 1.4e-72 276.9 230 65.2
BolC8t52877H Brassica oleracea HOM05D006960 ORTHO05D008699 1.8e-72 276.6 241 63.9
Sabra14G0073000 Salix brachista HOM05D006960 ORTHO05D008699 5.2e-72 275.0 223 66.4
Medtr5g015740 Medicago truncatula HOM05D006960 ORTHO05D008699 8.9e-72 274.2 235 66.4
Hund16718 Selenicereus undatus HOM05D006960 ORTHO05D008699 1.2e-71 273.9 200 70.0
C08p53630 Brassica napus HOM05D006960 ORTHO05D008699 2.6e-71 272.7 235 63.4
A09p69060 Brassica napus HOM05D006960 ORTHO05D008699 3.4e-71 272.3 235 63.4
Medtr1g114590 Medicago truncatula HOM05D006960 ORTHO05D008699 1.3e-70 270.4 235 65.5
Thhalv10008544m.g Eutrema salsugineum HOM05D006960 ORTHO05D008699 1.7e-70 270.0 245 62.0
Aqoxy3G01066 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 6.4e-70 268.1 198 71.7
Sp1g01000 Schrenkiella parvula HOM05D006960 ORTHO05D008699 8.3e-70 267.7 247 60.7
TPR.G4075 Trifolium pratense HOM05D006960 ORTHO05D008699 2.4e-69 266.2 215 66.5
Nn8g41032 Nelumbo nucifera HOM05D006960 ORTHO05D008699 5.4e-69 265.0 215 68.8
Carub.0001s0093 Capsella rubella HOM05D006960 ORTHO05D008699 1.2e-68 263.8 260 57.7
AT1G01290 Arabidopsis thaliana HOM05D006960 ORTHO05D008699 2.0e-68 263.1 261 57.9
CARHR001180 Cardamine hirsuta HOM05D006960 ORTHO05D008699 5.6e-66 255.0 252 59.5
Aa31LG5G970 Aethionema arabicum HOM05D000451 ORTHO05D000351 3.1e-64 249.2 207 65.2
Zm00001eb080710 Zea mays HOM05D006960 ORTHO05D008699 3.1e-64 249.2 204 66.2
unitig_899.g14796 Utricularia gibba HOM05D006960 ORTHO05D008699 5.2e-64 248.4 202 66.3
AL1G11170 Arabidopsis lyrata HOM05D006960 ORTHO05D008699 6.8e-64 248.1 178 71.9
arahy.Tifrunner.gnm1.ann1.CCVT8N Arachis hypogaea HOM05D006960 ORTHO05D008699 3.4e-63 245.7 228 62.7
arahy.Tifrunner.gnm1.ann1.EW69V8 Arachis hypogaea HOM05D006471 ORTHO05D008157 3.4e-63 245.7 181 70.7
Os04g0460500 Oryza sativa ssp. japonica HOM05D006960 ORTHO05D008699 2.1e-60 236.5 203 63.1
ATR0602G026 Amborella trichopoda HOM05D006960 ORTHO05D008699 6.2e-57 224.9 195 61.0
HPP92_002925 Vanilla planifolia HOM05D006960 ORTHO05D008699 3.4e-55 219.2 160 71.2
AUR62014969 Chenopodium quinoa HOM05D006960 ORTHO05D008699 2.1e-52 209.9 230 50.9
CsaV3_7G025390 Cucumis sativus L. HOM05D006960 ORTHO05D008699 4.0e-48 195.7 160 64.4
Mapoly0053s0024 Marchantia polymorpha HOM05D006960 ORTHO05D008699 9.9e-47 191.0 231 51.1
CDE10G0236 Ceratophyllum demersum HOM05D006960 ORTHO05D008699 3.8e-46 189.1 223 53.8
Pp3c20_11370 Physcomitrium patens HOM05D006960 ORTHO05D008699 8.4e-46 188.0 237 47.7
SMO351G0341 Selaginella moellendorffii HOM05D006960 ORTHO05D008699 1.3e-43 180.6 194 54.6
AUR62023452 Chenopodium quinoa HOM05D000040 ORTHO05D000759 1.5e-42 177.2 208 49.5
HPP92_028636 Vanilla planifolia HOM05D006960 ORTHO05D008699 5.6e-42 175.3 220 50.5
MCO01G113 Micromonas commoda HOM05D006960 ORTHO05D008699 2.2e-38 163.3 157 54.8
Cre08.g361050 Chlamydomonas reinhardtii HOM05D006960 ORTHO05D008699 1.4e-37 160.6 185 49.2
CBR_g23014 Chara braunii HOM05D006960 ORTHO05D008699 1.2e-36 157.5 155 54.8
CDE10G0916 Ceratophyllum demersum HOM05D000108 ORTHO05D001781 3.3e-34 149.4 112 69.6
FAN03G0019 Fragaria x ananassa HOM05D006960 ORTHO05D008699 4.0e-32 142.5 95 74.7
VMungo0964G0001 Vigna mungo HOM05D006960 ORTHO05D008699 9.0e-32 141.4 155 49.0
CiPaw.01G076800 Carya illinoinensis HOM05D006960 ORTHO05D008699 4.3e-26 122.5 110 56.4
TAR636G2744 Trochodendron aralioides HOM05D006960 ORTHO05D008699 2.4e-24 116.7 107 57.0
Cpa.g.sc96.27 Carica papaya HOM05D006960 ORTHO05D008699 3.1e-24 116.3 151 48.3
Cfa022703 Carpinus fangiana HOM05D006960 ORTHO05D008699 2.2e-22 110.2 157 43.9
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 3.3e-18 96.3 116 43.1
PRCOL_00000953 Prasinoderma coloniale HOM05D006960 ORTHO05D008699 4.9e-14 82.4 217 30.0
Gohir.D08G121100 Gossypium hirsutum HOM05D006960 ORTHO05D008699 7.1e-13 78.6 61 67.2
Gohir.D10G162832 Gossypium hirsutum HOM05D006960 ORTHO05D008699 7.1e-13 78.6 61 67.2
Gorai.011G078500 Gossypium raimondii HOM05D006960 ORTHO05D008699 9.3e-13 78.2 61 63.9
Gorai.002G097600 Gossypium raimondii HOM05D006960 ORTHO05D018836 2.1e-12 77.0 60 66.7
Gohir.D05G312133 Gossypium hirsutum HOM05D006960 ORTHO05D008699 2.7e-12 76.6 61 65.6
Gohir.D01G074900 Gossypium hirsutum HOM05D006960 ORTHO05D008699 7.4e-10 68.6 58 58.6
Medtr5g015730 Medicago truncatula HOM05D006960 ORTHO05D008699 5.9e-07 58.9 36 75.0

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (0 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (6 genes)
Glycine max (1 genes)
Gossypium hirsutum (6 genes)
Gossypium raimondii (3 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (3 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings