Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016184 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 1.2e-28 129.0 61 100.0
CSS0036430 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 1.2e-28 129.0 61 100.0
Hma1.2p1_0757F.1_g213300 Hydrangea macrophylla HOM05D007733 ORTHO05D009786 2.9e-22 107.8 58 87.9
Oeu063785.1 Olea europaea HOM05D007733 ORTHO05D009786 6.5e-22 106.7 61 83.6
CSS0035024 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 8.5e-22 106.3 61 85.2
Manes.01G136000 Manihot esculenta HOM05D007733 ORTHO05D009786 4.2e-21 104.0 57 84.2
MD12G1095600 Malus domestica HOM05D007733 ORTHO05D009786 1.2e-20 102.4 59 78.0
MD00G1018100 Malus domestica HOM05D007733 ORTHO05D009786 2.1e-20 101.7 59 78.0
CiPaw.09G048000 Carya illinoinensis HOM05D007733 ORTHO05D009786 3.6e-20 100.9 60 80.0
Prupe.7G032300 Prunus persica HOM05D007733 ORTHO05D009786 6.1e-20 100.1 59 78.0
PGR031G3673 Punica granatum HOM05D007733 ORTHO05D009786 2.3e-19 98.2 63 76.2
MELO3C019082.2 Cucumis melo HOM05D007733 ORTHO05D009786 3.9e-19 97.4 55 81.8
CsaV3_4G029620 Cucumis sativus L. HOM05D007733 ORTHO05D009786 3.9e-19 97.4 55 81.8
Sed0021033 Sechium edule HOM05D007733 ORTHO05D009786 5.1e-19 97.1 55 80.0
Solyc10g078420.2 Solanum lycopersicum HOM05D007733 ORTHO05D009786 5.1e-19 97.1 59 74.6
FAN06G4775 Fragaria x ananassa HOM05D007733 ORTHO05D009786 6.7e-19 96.7 57 78.9
FAN10G3322 Fragaria x ananassa HOM05D000072 ORTHO05D000026 6.7e-19 96.7 57 78.9
Potri.016G036400 Populus trichocarpa HOM05D007733 ORTHO05D009786 8.7e-19 96.3 58 75.9
CAN.G960.60 Capsicum annuum HOM05D007733 ORTHO05D009786 1.5e-18 95.5 59 72.9
Thecc.01G129600 Theobroma cacao HOM05D007733 ORTHO05D009786 1.5e-18 95.5 61 78.7
Potri.006G039100 Populus trichocarpa HOM05D007733 ORTHO05D009786 1.9e-18 95.1 58 79.3
CDE04G2892 Ceratophyllum demersum HOM05D007733 ORTHO05D009786 2.5e-18 94.7 61 72.1
FAN03G1257 Fragaria x ananassa HOM05D000072 ORTHO05D000026 2.5e-18 94.7 55 80.0
RcHm_v2.0_Chr1g0328511 Rosa chinensis HOM05D007733 ORTHO05D009786 2.5e-18 94.7 59 76.3
SGA_v2.0_scaffold3G01720 Striga asiatica HOM05D007733 ORTHO05D009786 2.5e-18 94.7 56 76.8
TWI74G1577 Tripterygium wilfordii HOM05D007733 ORTHO05D009786 2.5e-18 94.7 60 73.3
Atru.chr1.1436 Acer truncatum HOM05D007733 ORTHO05D009786 3.3e-18 94.4 59 78.0
PGSC0003DMG401008361 Solanum tuberosum HOM05D007733 ORTHO05D009786 4.3e-18 94.0 59 72.9
Peaxi162Scf00696g00026 Petunia axillaris HOM05D007733 ORTHO05D009786 5.7e-18 93.6 53 83.0
RcHm_v2.0_Chr1g0328381 Rosa chinensis HOM05D007733 ORTHO05D009786 5.7e-18 93.6 59 76.3
Lalb_Chr06g0173691 Lupinus albus HOM05D007733 ORTHO05D009786 7.4e-18 93.2 57 75.4
Cc06_g19360 Coffea canephora HOM05D007733 ORTHO05D009786 9.7e-18 92.8 59 76.3
Migut.J01653 Erythranthe guttata HOM05D007733 ORTHO05D009786 9.7e-18 92.8 61 72.1
AT5G09225 Arabidopsis thaliana HOM05D007733 ORTHO05D009786 1.6e-17 92.0 54 75.9
SGA_v2.0_scaffold105G30286 Striga asiatica HOM05D007733 ORTHO05D009786 1.6e-17 92.0 55 76.4
Carub.0006s0778 Capsella rubella HOM05D007733 ORTHO05D009786 2.2e-17 91.7 54 75.9
Phvul.005G122800 Phaseolus vulgaris HOM05D007733 ORTHO05D009786 2.2e-17 91.7 57 70.2
THA.LOC104819346 Tarenaya hassleriana HOM05D007733 ORTHO05D009786 2.2e-17 91.7 58 72.4
RcHm_v2.0_Chr1g0328411 Rosa chinensis HOM05D007733 ORTHO05D009786 2.8e-17 91.3 59 74.6
GSVIVG01004069001 Vitis vinifera HOM05D007733 ORTHO05D009786 2.8e-17 91.3 53 79.2
AL6G19610 Arabidopsis lyrata HOM05D007733 ORTHO05D009786 4.8e-17 90.5 54 74.1
arahy.Tifrunner.gnm1.ann1.2TE5XM Arachis hypogaea HOM05D007733 ORTHO05D009786 6.3e-17 90.1 59 67.8
CARHR204200 Cardamine hirsuta HOM05D007733 ORTHO05D009786 6.3e-17 90.1 54 74.1
Thhalv10015230m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 6.3e-17 90.1 59 69.5
Glyma.12G186000 Glycine max HOM05D007733 ORTHO05D009786 6.3e-17 90.1 57 70.2
Gohir.A11G247101 Gossypium hirsutum HOM05D007733 ORTHO05D009786 6.3e-17 90.1 59 71.2
Aa31LG1G18010 Aethionema arabicum HOM05D007733 ORTHO05D009786 8.2e-17 89.7 61 68.9
Aqoxy1G00180 Aquilegia oxysepala HOM05D007733 ORTHO05D009786 1.1e-16 89.4 52 78.8
Duzib264G0681 Durio zibethinus HOM05D007733 ORTHO05D009786 1.1e-16 89.4 59 74.6
Os11g0136701 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 1.1e-16 89.4 60 66.7
Glyma.13G315500 Glycine max HOM05D007733 ORTHO05D009786 2.4e-16 88.2 57 68.4
PSO384G4410 Papaver somniferum HOM05D007733 ORTHO05D009786 2.4e-16 88.2 57 68.4
BcaC03g13244 Brassica carinata HOM05D007733 ORTHO05D009786 3.1e-16 87.8 60 65.0
C02p03760 Brassica napus HOM05D007733 ORTHO05D009786 3.1e-16 87.8 60 65.0
BolC2t06337H Brassica oleracea HOM05D007733 ORTHO05D009786 3.1e-16 87.8 60 65.0
Thhalv10005241m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 3.1e-16 87.8 61 67.2
CANSAT64G1685 Cannabis sativa HOM05D007733 ORTHO05D009786 4.1e-16 87.4 58 70.7
Lsat_1_v5_gn_5_157040 Lactuca sativa HOM05D007733 ORTHO05D009786 4.1e-16 87.4 52 80.8
BcaB05g21564 Brassica carinata HOM05D007733 ORTHO05D009786 5.3e-16 87.0 60 65.0
Medtr1g069390 Medicago truncatula HOM05D007733 ORTHO05D009786 5.3e-16 87.0 52 73.1
Psat4g102040 Pisum sativum HOM05D007733 ORTHO05D009786 5.3e-16 87.0 52 75.0
Sp6g34080 Schrenkiella parvula HOM05D007733 ORTHO05D009786 5.3e-16 87.0 54 70.4
Os12g0133600 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 1.2e-15 85.9 60 63.3
BcaC01g02637 Brassica carinata HOM05D007733 ORTHO05D009786 1.5e-15 85.5 57 64.9
BcaB02g09770 Brassica carinata HOM05D007733 ORTHO05D009786 2.0e-15 85.1 61 62.3
BraA02t04971Z Brassica rapa HOM05D007733 ORTHO05D009786 2.0e-15 85.1 51 72.5
vmacro07790 Vaccinium macrocarpon HOM05D007733 ORTHO05D009786 2.0e-15 85.1 41 92.7
arahy.Tifrunner.gnm1.ann1.05QC9F Arachis hypogaea HOM05D007733 ORTHO05D009786 2.6e-15 84.7 56 69.6
BraA06t25997Z Brassica rapa HOM05D007733 ORTHO05D009786 2.6e-15 84.7 61 63.9
Oeu022972.2 Olea europaea HOM05D007733 ORTHO05D009786 7.7e-15 83.2 41 87.8
HanXRQChr01g0008231 Helianthus annuus HOM05D007733 ORTHO05D009786 1.0e-14 82.8 42 83.3
COL.COLO4_35702 Corchorus olitorius HOM05D007733 ORTHO05D009786 1.7e-14 82.0 41 85.4
Nitab4.5_0000812g0080 Nicotiana tabacum HOM05D007733 ORTHO05D009786 1.7e-14 82.0 41 87.8
Sc19g0008160 Simmondsia chinensis HOM05D007733 ORTHO05D009786 1.7e-14 82.0 41 87.8
FAN01G2779 Fragaria x ananassa HOM05D000072 ORTHO05D000026 2.2e-14 81.6 41 87.8
Nitab4.5_0004588g0050 Nicotiana tabacum HOM05D007733 ORTHO05D009786 2.2e-14 81.6 42 83.3
A06p30480 Brassica napus HOM05D007733 ORTHO05D009786 2.9e-14 81.3 61 62.3
Gohir.D11G257301 Gossypium hirsutum HOM05D007733 ORTHO05D009786 2.9e-14 81.3 41 85.4
Gorai.007G275700 Gossypium raimondii HOM05D007733 ORTHO05D009786 2.9e-14 81.3 41 85.4
Peaxi162Scf00848g00014 Petunia axillaris HOM05D007733 ORTHO05D009786 1.1e-13 79.3 41 82.9
MBI19_g20791_MAGBIO Magnolia biondii HOM05D007733 ORTHO05D009786 2.5e-13 78.2 45 75.6
Manes.02G094502 Manihot esculenta HOM05D007733 ORTHO05D009786 2.5e-13 78.2 50 74.0
Hund24585 Selenicereus undatus HOM05D007733 ORTHO05D009786 3.2e-13 77.8 42 78.6
Peaxi162Scf00696g00024 Petunia axillaris HOM05D007733 ORTHO05D009786 2.1e-12 75.1 39 84.6
SalBow7G0067 Salvia bowleyana HOM05D007733 ORTHO05D009786 7.9e-12 73.2 45 73.3
HPP92_015863 Vanilla planifolia HOM05D007733 ORTHO05D009786 6.7e-11 70.1 40 75.0
HPP92_015865 Vanilla planifolia HOM05D007733 ORTHO05D009786 6.7e-11 70.1 40 75.0
Zm00001eb093420 Zea mays HOM05D007733 ORTHO05D009786 4.4e-10 67.4 44 63.6
DCAR_027120 Daucus carota HOM05D000958 ORTHO05D000786 5.7e-10 67.0 34 88.2
Mapoly0009s0018 Marchantia polymorpha HOM05D007733 ORTHO05D009786 1.4e-08 62.4 47 57.4
RcHm_v2.0_Chr1g0328311 Rosa chinensis HOM05D007733 ORTHO05D009786 1.8e-08 62.0 34 82.4
Gohir.A11G247151 Gossypium hirsutum HOM05D007733 ORTHO05D009786 5.9e-07 57.0 36 77.8
CBR_g21252 Chara braunii HOM05D007733 ORTHO05D009786 1.3e-06 55.8 57 43.9

Acer truncatum (1 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (4 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (0 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (0 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (3 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (1 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (0 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (4 genes)
Salix brachista (0 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings