Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035922 Camellia sinensis var. sinensis HOM05D005663 ORTHO05D007258 4.1e-99 365.2 249 100.0
CSS0003387 Camellia sinensis var. sinensis HOM05D005663 ORTHO05D007258 3.3e-64 249.2 249 80.7
Actinidia06667 Actinidia chinensis HOM05D005663 ORTHO05D007258 3.1e-62 242.7 193 67.9
Prupe.6G163100 Prunus persica HOM05D005663 ORTHO05D007258 5.8e-61 238.4 159 75.5
vmacro18658 Vaccinium macrocarpon HOM05D005663 ORTHO05D007258 6.0e-58 228.4 193 64.8
Hma1.2p1_0006F.1_g004880 Hydrangea macrophylla HOM05D005663 ORTHO05D007258 1.8e-57 226.9 193 62.7
RcHm_v2.0_Chr2g0119121 Rosa chinensis HOM05D005663 ORTHO05D007258 3.0e-57 226.1 192 64.6
FvH4_1g23570 Fragaria vesca HOM05D005663 ORTHO05D007258 2.5e-56 223.0 191 63.9
FAN26G2344 Fragaria x ananassa HOM05D005663 ORTHO05D007258 2.5e-56 223.0 191 63.9
Ciclev10026263m.g Citrus clementina HOM05D005663 ORTHO05D007258 5.3e-54 215.3 188 62.8
Manes.13G086600 Manihot esculenta HOM05D005663 ORTHO05D007258 1.5e-53 213.8 201 57.7
Lsat_1_v5_gn_4_138241 Lactuca sativa HOM05D005663 ORTHO05D007258 2.0e-53 213.4 198 58.1
MD15G1343200 Malus domestica HOM05D005663 ORTHO05D007258 9.9e-53 211.1 189 61.4
GSVIVG01026586001 Vitis vinifera HOM05D005663 ORTHO05D007258 9.9e-53 211.1 186 59.7
Eucgr.I00244 Eucalyptus grandis HOM05D005663 ORTHO05D007258 1.3e-52 210.7 187 59.9
Potri.001G309300 Populus trichocarpa HOM05D005663 ORTHO05D007258 1.3e-52 210.7 191 60.7
HanXRQChr15g0490251 Helianthus annuus HOM05D005663 ORTHO05D007258 2.2e-52 209.9 194 57.2
QL06p051868 Quercus lobata HOM05D005663 ORTHO05D007258 2.9e-52 209.5 188 58.5
Atru.chr4.540 Acer truncatum HOM05D005663 ORTHO05D007258 6.4e-52 208.4 183 62.3
ECA238G2757 Erigeron canadensis HOM05D005663 ORTHO05D007258 6.4e-52 208.4 191 57.1
Haze_25191 Corylus avellana HOM05D005663 ORTHO05D007258 8.4e-52 208.0 184 59.2
Haze_25195 Corylus avellana HOM05D005663 ORTHO05D007258 2.4e-51 206.5 187 58.3
FAN19G1272 Fragaria x ananassa HOM05D005663 ORTHO05D007258 2.4e-51 206.5 223 54.7
SalBow2G3104 Salvia bowleyana HOM05D005663 ORTHO05D007258 2.4e-51 206.5 183 60.7
Nn5g28726 Nelumbo nucifera HOM05D005663 ORTHO05D007258 4.2e-51 205.7 191 57.1
TWI75G0275 Tripterygium wilfordii HOM05D005663 ORTHO05D007258 9.3e-51 204.5 191 58.6
Nitab4.5_0002064g0060 Nicotiana tabacum HOM05D005663 ORTHO05D007258 2.1e-50 203.4 204 56.9
Duzib264G0763 Durio zibethinus HOM05D005663 ORTHO05D007258 4.6e-50 202.2 187 58.8
Thecc.01G121000 Theobroma cacao HOM05D005663 ORTHO05D007258 6.0e-50 201.8 199 56.8
TPR.G2176 Trifolium pratense HOM05D005663 ORTHO05D007258 6.0e-50 201.8 187 57.2
Gohir.A06G149400 Gossypium hirsutum HOM05D005663 ORTHO05D007258 7.9e-50 201.4 188 57.4
Medtr8g092680 Medicago truncatula HOM05D005663 ORTHO05D007258 1.0e-49 201.1 187 57.2
Glyma.08G146300 Glycine max HOM05D005663 ORTHO05D007258 1.3e-49 200.7 187 55.6
Gorai.010G181700 Gossypium raimondii HOM05D005663 ORTHO05D007258 1.3e-49 200.7 188 56.9
CiPaw.03G123800 Carya illinoinensis HOM05D005663 ORTHO05D007258 1.8e-49 200.3 189 57.7
Migut.H01114 Erythranthe guttata HOM05D005663 ORTHO05D007258 3.9e-49 199.1 187 59.4
Phvul.002G269000 Phaseolus vulgaris HOM05D005663 ORTHO05D007258 5.1e-49 198.7 187 55.6
Psat7g048760 Pisum sativum HOM05D005663 ORTHO05D007258 6.7e-49 198.4 192 54.2
Cc07_g17370 Coffea canephora HOM05D005663 ORTHO05D007258 8.7e-49 198.0 183 56.8
Glyma.05G188200 Glycine max HOM05D005663 ORTHO05D007258 8.7e-49 198.0 187 55.6
PSO541G2505 Papaver somniferum HOM05D005663 ORTHO05D007258 1.1e-48 197.6 184 58.2
Gorai.002G151300 Gossypium raimondii HOM05D005663 ORTHO05D007258 2.5e-48 196.4 187 56.7
VMungo0251G2076 Vigna mungo HOM05D005663 ORTHO05D007258 5.6e-48 195.3 188 54.3
PSO675G3544 Papaver somniferum HOM05D005663 ORTHO05D007258 7.4e-48 194.9 184 57.6
MBI09_g18623_MAGBIO Magnolia biondii HOM05D005663 ORTHO05D007258 9.6e-48 194.5 186 57.0
MBI09_g20114_MAGBIO Magnolia biondii HOM05D005663 ORTHO05D007258 1.3e-47 194.1 186 57.5
Solyc11g005340.3 Solanum lycopersicum HOM05D005663 ORTHO05D007258 4.8e-47 192.2 191 57.1
Aqoxy3G02633 Aquilegia oxysepala HOM05D005663 ORTHO05D007258 6.2e-47 191.8 188 54.3
unitig_899.g14706 Utricularia gibba HOM05D005663 ORTHO05D007258 6.2e-47 191.8 183 55.7
Sopen11g001350 Solanum pennellii HOM05D005663 ORTHO05D007258 1.4e-46 190.7 191 57.1
Hund03480 Selenicereus undatus HOM05D005663 ORTHO05D007258 3.1e-46 189.5 188 53.7
PGSC0003DMG400003986 Solanum tuberosum HOM05D005663 ORTHO05D007258 4.5e-45 185.7 175 58.9
SGA_v2.0_scaffold137G35114 Striga asiatica HOM05D005663 ORTHO05D007258 7.6e-45 184.9 201 54.2
Thecc.01G121200 Theobroma cacao HOM05D005663 ORTHO05D007258 1.0e-44 184.5 157 62.4
Lj4g0014342 Lotus japonicus HOM05D005663 ORTHO05D007258 1.7e-44 183.7 216 48.6
Nitab4.5_0009320g0020 Nicotiana tabacum HOM05D005663 ORTHO05D007258 1.7e-44 183.7 208 52.4
Duzib147G1259 Durio zibethinus HOM05D005663 ORTHO05D007258 1.1e-43 181.0 190 52.6
CDE04G2754 Ceratophyllum demersum HOM05D005663 ORTHO05D007258 1.9e-43 180.3 187 52.9
CDE12G0169 Ceratophyllum demersum HOM05D005663 ORTHO05D007258 3.2e-43 179.5 187 52.4
PGR119G0285 Punica granatum HOM05D005663 ORTHO05D007258 2.7e-42 176.4 165 58.8
Lj4A856T34 Lonicera japonica HOM05D005663 ORTHO05D007258 3.5e-42 176.0 154 62.3
AL6G20230 Arabidopsis lyrata HOM05D005663 ORTHO05D007258 7.9e-42 174.9 191 50.3
arahy.Tifrunner.gnm1.ann1.6JE7GZ Arachis hypogaea HOM05D005663 ORTHO05D007258 1.3e-41 174.1 155 60.0
TAR625G0848 Trochodendron aralioides HOM05D005663 ORTHO05D007258 1.3e-41 174.1 168 57.7
AT5G09820 Arabidopsis thaliana HOM05D005663 ORTHO05D007258 2.3e-41 173.3 191 49.7
Haze_25187 Corylus avellana HOM05D005663 ORTHO05D007258 3.0e-41 172.9 165 56.4
Carub.0006s0824 Capsella rubella HOM05D005663 ORTHO05D007258 5.1e-41 172.2 190 49.5
CARHR203580 Cardamine hirsuta HOM05D005663 ORTHO05D007258 8.7e-41 171.4 190 50.0
Os04g0422000 Oryza sativa ssp. japonica HOM05D005663 ORTHO05D007258 1.1e-40 171.0 191 47.6
Zm00001eb083210 Zea mays HOM05D005663 ORTHO05D007258 1.1e-40 171.0 190 50.0
CANSAT01G3211 Cannabis sativa HOM05D005663 ORTHO05D007258 1.5e-40 170.6 159 59.7
arahy.Tifrunner.gnm1.ann1.67XQRG Arachis hypogaea HOM05D005663 ORTHO05D007258 1.9e-40 170.2 155 58.7
Aa31LG3G17290 Aethionema arabicum HOM05D005663 ORTHO05D007258 3.3e-40 169.5 186 48.4
BolC3t13007H Brassica oleracea HOM05D005663 ORTHO05D007258 4.3e-40 169.1 192 46.9
A03p04280 Brassica napus HOM05D005663 ORTHO05D007258 5.7e-40 168.7 192 47.4
Mapoly0058s0022 Marchantia polymorpha HOM05D005663 ORTHO05D007258 5.7e-40 168.7 184 48.4
arahy.Tifrunner.gnm1.ann1.SHST7E Arachis hypogaea HOM05D005663 ORTHO05D007258 9.7e-40 167.9 137 62.8
BraA03t09772Z Brassica rapa HOM05D005663 ORTHO05D007258 1.3e-39 167.5 191 47.6
Pp3c3_12020 Physcomitrium patens HOM05D005663 ORTHO05D007258 1.3e-39 167.5 184 47.8
THA.LOC104818465 Tarenaya hassleriana HOM05D005663 ORTHO05D007258 1.3e-39 167.5 197 47.7
Oeu047646.1 Olea europaea HOM05D005663 ORTHO05D007258 2.2e-39 166.8 182 53.3
Sp6g33590 Schrenkiella parvula HOM05D005663 ORTHO05D007258 3.7e-39 166.0 191 48.2
Thhalv10014407m.g Eutrema salsugineum HOM05D005663 ORTHO05D007258 6.3e-39 165.2 186 48.4
Dinv15112 Davidia involucrata HOM05D005663 ORTHO05D007258 1.4e-38 164.1 94 86.2
SEGI_39378 Sequoiadendron giganteum HOM05D005663 ORTHO05D007258 3.1e-38 162.9 184 47.8
HPP92_016149 Vanilla planifolia HOM05D005663 ORTHO05D007258 3.1e-38 162.9 192 47.9
arahy.Tifrunner.gnm1.ann1.ILAW0V Arachis hypogaea HOM05D005663 ORTHO05D007258 4.1e-38 162.5 155 56.1
DCAR_027256 Daucus carota HOM05D005663 ORTHO05D007258 4.5e-37 159.1 167 53.3
EL10Ac6g15254 Beta vulgaris HOM05D005663 ORTHO05D007258 8.5e-36 154.8 169 52.1
RcHm_v2.0_Chr2g0119061 Rosa chinensis HOM05D005663 ORTHO05D007258 4.2e-35 152.5 165 53.3
Ah.03g146600 Amaranthus hybridus HOM05D005663 ORTHO05D007258 9.4e-35 151.4 141 56.7
Peaxi162Scf00025g02122 Petunia axillaris HOM05D005663 ORTHO05D007258 3.9e-33 146.0 197 46.7
SMO358G0575 Selaginella moellendorffii HOM05D005663 ORTHO05D007258 1.5e-32 144.1 174 45.4
Atru.chr4.1055 Acer truncatum HOM05D005663 ORTHO05D007258 2.2e-31 140.2 160 50.0
Atru.chr4.1044 Acer truncatum HOM05D005663 ORTHO05D007258 3.7e-31 139.4 160 49.4
C03p04720 Brassica napus HOM05D005663 ORTHO05D007258 1.8e-30 137.1 168 45.8
Cre03.g188700 Chlamydomonas reinhardtii HOM05D005663 ORTHO05D007258 7.7e-29 131.7 190 40.0
arahy.Tifrunner.gnm1.ann1.2XR3X5 Arachis hypogaea HOM05D005663 ORTHO05D007258 2.1e-26 123.6 148 50.7
arahy.Tifrunner.gnm1.ann1.B1HTRM Arachis hypogaea HOM05D005663 ORTHO05D007258 4.7e-26 122.5 157 49.0
COL.COLO4_22418 Corchorus olitorius HOM05D005663 ORTHO05D007258 4.7e-26 122.5 139 51.1
Dinv09933 Davidia involucrata HOM05D005663 ORTHO05D007258 5.1e-25 119.0 127 53.5
Sabra16G0195100 Salix brachista HOM05D005663 ORTHO05D007258 1.5e-24 117.5 139 51.1
Gohir.D06G155500 Gossypium hirsutum HOM05D005663 ORTHO05D007258 7.4e-24 115.2 139 47.5
arahy.Tifrunner.gnm1.ann1.YJV2YZ Arachis hypogaea HOM05D005663 ORTHO05D007258 4.8e-23 112.5 138 46.4
Sc03g0004740 Simmondsia chinensis HOM05D005663 ORTHO05D007258 1.0e-20 104.8 138 44.2
TAR381G0497 Trochodendron aralioides HOM05D005663 ORTHO05D007258 6.5e-20 102.1 123 50.4
FAN28G2344 Fragaria x ananassa HOM05D005663 ORTHO05D007258 7.2e-19 98.6 50 90.0
Lalb_Chr12g0203341 Lupinus albus HOM05D005663 ORTHO05D007258 8.0e-18 95.1 52 80.8
FAN23G0034 Fragaria x ananassa HOM05D005663 ORTHO05D007258 8.8e-17 91.7 105 51.4
Ca_17664_v3 Cicer arietinum L. HOM05D005663 ORTHO05D007258 3.3e-16 89.7 122 43.4
PRCOL_00005152 Prasinoderma coloniale HOM05D004534 ORTHO05D005413 7.4e-16 88.6 104 43.3
Lalb_Chr12g0203331 Lupinus albus HOM05D005663 ORTHO05D007258 9.7e-16 88.2 122 42.6
arahy.Tifrunner.gnm1.ann1.4DFA8P Arachis hypogaea HOM05D005663 ORTHO05D007258 3.1e-14 83.2 104 46.2
BcaNung05557 Brassica carinata HOM05D005663 ORTHO05D007258 4.1e-14 82.8 135 37.8
Rhsim08G0003400 Rhododendron simsii HOM05D005663 ORTHO05D007258 2.0e-13 80.5 49 79.6
FAN19G2811 Fragaria x ananassa HOM05D005663 ORTHO05D007258 5.0e-12 75.9 79 55.7
COL.COLO4_22420 Corchorus olitorius HOM05D005663 ORTHO05D007258 1.1e-11 74.7 53 71.7
FvH4_1g28530 Fragaria vesca HOM05D005663 ORTHO05D007258 5.5e-11 72.4 78 53.8
CAN.G249.7 Capsicum annuum HOM05D005663 ORTHO05D007258 7.2e-11 72.0 49 73.5
arahy.Tifrunner.gnm1.ann1.3896ZX Arachis hypogaea HOM05D005663 ORTHO05D007258 1.6e-10 70.9 48 70.8
Cpa.g.c33395.2 Carica papaya HOM05D005663 ORTHO05D007258 1.6e-10 70.9 53 66.0
MD01G1001300 Malus domestica HOM05D005663 ORTHO05D007258 2.0e-08 63.9 50 64.0
Lj1A1237T45 Lonicera japonica HOM05D002234 ORTHO05D002254 4.8e-07 59.3 192 29.7
C07p35050 Brassica napus HOM05D003483 ORTHO05D004101 7.0e-06 55.5 167 29.3
Migut.H01594 Erythranthe guttata HOM05D002234 ORTHO05D002254 7.0e-06 55.5 218 27.5
BcaC06g33930 Brassica carinata HOM05D003483 ORTHO05D004101 9.1e-06 55.1 167 28.7
A06p42270 Brassica napus HOM05D003483 ORTHO05D004101 9.1e-06 55.1 167 28.7

Acer truncatum (3 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (9 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (4 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (0 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (3 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (2 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (2 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings