Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 1.7e-85 319.3 164 100.0
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 2.0e-73 279.3 164 84.1
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 1.4e-66 256.5 164 80.5
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 7.5e-65 250.8 161 79.5
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 7.5e-65 250.8 161 79.5
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 1.0e-61 240.4 165 75.8
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 8.0e-59 230.7 163 71.2
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 1.2e-57 226.9 159 69.2
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 2.6e-57 225.7 159 68.6
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 6.3e-56 221.1 158 67.7
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 6.3e-56 221.1 159 66.0
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 5.4e-55 218.0 159 68.6
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 9.1e-55 217.2 165 66.1
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 2.0e-54 216.1 160 68.1
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 1.0e-53 213.8 146 68.5
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 3.8e-53 211.8 161 65.8
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 5.0e-53 211.5 158 66.5
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 6.5e-53 211.1 142 72.5
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 8.6e-53 210.7 163 64.4
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 4.2e-52 208.4 162 63.6
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 7.2e-52 207.6 161 65.2
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 9.5e-52 207.2 157 65.0
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 9.5e-52 207.2 162 62.3
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.6e-51 206.5 158 64.6
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 3.6e-51 205.3 154 64.9
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 6.1e-51 204.5 165 63.6
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 6.1e-51 204.5 156 64.7
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 8.0e-51 204.1 141 68.1
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 1.4e-50 203.4 148 65.5
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 1.4e-50 203.4 165 62.4
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 1.8e-50 203.0 157 66.2
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 3.0e-50 202.2 157 61.8
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 3.0e-50 202.2 149 66.4
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 5.2e-50 201.4 147 63.3
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 5.2e-50 201.4 159 66.7
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 5.2e-50 201.4 159 66.7
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 6.8e-50 201.1 161 59.6
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 8.9e-50 200.7 158 60.8
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 8.9e-50 200.7 141 66.7
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 8.9e-50 200.7 162 62.3
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 1.2e-49 200.3 159 66.0
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 1.5e-49 199.9 163 62.6
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 1.5e-49 199.9 145 64.1
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 2.0e-49 199.5 159 60.4
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 2.0e-49 199.5 141 66.7
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 2.6e-49 199.1 144 66.7
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 2.6e-49 199.1 154 64.3
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 3.4e-49 198.7 164 61.0
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 3.4e-49 198.7 145 63.4
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 3.4e-49 198.7 159 62.9
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 5.7e-49 198.0 157 59.9
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 5.7e-49 198.0 145 66.2
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 5.7e-49 198.0 161 60.2
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 7.5e-49 197.6 154 63.0
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 7.5e-49 197.6 164 59.8
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 9.8e-49 197.2 162 59.9
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 9.8e-49 197.2 159 61.0
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 1.3e-48 196.8 157 63.1
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 1.7e-48 196.4 144 64.6
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 1.7e-48 196.4 157 62.4
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 3.7e-48 195.3 144 62.5
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 3.7e-48 195.3 143 63.6
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 3.7e-48 195.3 142 64.8
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 4.9e-48 194.9 162 63.0
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 4.9e-48 194.9 163 62.6
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 8.3e-48 194.1 159 62.3
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 8.3e-48 194.1 144 64.6
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 1.1e-47 193.7 144 63.2
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 1.1e-47 193.7 140 65.7
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 1.8e-47 193.0 156 60.9
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 2.4e-47 192.6 144 62.5
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 2.4e-47 192.6 163 61.3
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 3.1e-47 192.2 144 63.2
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 3.1e-47 192.2 154 60.4
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 4.1e-47 191.8 158 61.4
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 5.4e-47 191.4 154 59.7
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 7.0e-47 191.0 160 59.4
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 9.2e-47 190.7 156 57.1
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 2.0e-46 189.5 159 58.5
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 2.0e-46 189.5 137 65.7
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 3.5e-46 188.7 161 55.9
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 7.8e-46 187.6 147 60.5
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 1.0e-45 187.2 157 58.6
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 1.7e-45 186.4 148 62.8
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 5.0e-45 184.9 166 59.0
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 6.6e-45 184.5 154 57.1
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 8.6e-45 184.1 160 56.9
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 8.6e-45 184.1 159 56.0
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 1.1e-44 183.7 140 60.7
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 1.9e-44 183.0 158 57.0
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 1.9e-44 183.0 128 71.9
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.9e-44 183.0 147 56.5
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 2.5e-44 182.6 164 53.0
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 3.3e-44 182.2 144 59.0
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 4.3e-44 181.8 137 62.8
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 5.6e-44 181.4 158 57.0
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 8.0e-43 177.6 133 59.4
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 2.9e-40 169.1 114 72.8
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 2.9e-40 169.1 111 70.3
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 3.7e-40 168.7 114 71.9
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 8.3e-40 167.5 162 53.7
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 1.1e-39 167.2 135 58.5
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.8e-39 166.4 115 69.6
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 3.2e-39 165.6 146 55.5
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 7.0e-39 164.5 127 63.8
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 6.0e-38 161.4 147 55.1
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 2.5e-36 156.0 127 60.6
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 1.1e-34 150.6 166 48.2
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 2.3e-34 149.4 132 53.8
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 2.6e-33 146.0 147 49.7
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 9.8e-33 144.1 160 50.6
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 1.3e-29 133.7 138 42.0
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 3.0e-29 132.5 158 46.2
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 1.6e-27 126.7 77 74.0
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 3.6e-27 125.6 139 44.6
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 1.3e-24 117.1 138 45.7
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 3.7e-24 115.5 139 43.2
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 1.3e-21 107.1 141 42.6
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 1.9e-20 103.2 111 45.9
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 5.6e-20 101.7 103 49.5
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 8.1e-19 97.8 88 54.5
Actinidia20438 Actinidia chinensis HOM05D002419 ORTHO05D008128 1.1e-18 97.4 59 76.3
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05D002419 ORTHO05D008128 1.4e-18 97.1 137 39.4
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 5.2e-18 95.1 90 55.6
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 7.6e-17 91.3 64 68.8
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 2.9e-16 89.4 72 59.7
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 1.4e-15 87.0 89 51.7
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 7.8e-14 81.3 139 34.5
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 7.3e-12 74.7 70 51.4
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 6.2e-11 71.6 76 47.4
Ciclev10029934m.g Citrus clementina HOM05D002419 ORTHO05D008128 2.6e-09 66.2 41 68.3

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (2 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (2 genes)
Olea europaea (3 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (3 genes)
Physcomitrium patens (1 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings