Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035319 Camellia sinensis var. sinensis HOM05D004688 ORTHO05D005490 4.7e-149 531.2 269 100.0
CSS0020442 Camellia sinensis var. sinensis HOM05D004688 ORTHO05D005490 9.2e-145 516.9 261 99.6
Actinidia20087 Actinidia chinensis HOM05D004688 ORTHO05D005490 1.2e-109 400.2 260 80.8
vmacro12865 Vaccinium macrocarpon HOM05D004688 ORTHO05D005490 4.0e-108 395.2 265 78.5
Dinv24334 Davidia involucrata HOM05D004688 ORTHO05D005490 8.9e-108 394.0 264 79.5
RhsimUnG0132900 Rhododendron simsii HOM05D004688 ORTHO05D005490 5.8e-107 391.3 260 79.6
Hma1.2p1_0528F.1_g173050 Hydrangea macrophylla HOM05D004688 ORTHO05D005490 1.1e-105 387.1 260 78.5
CiPaw.05G212300 Carya illinoinensis HOM05D004688 ORTHO05D005490 2.1e-96 356.3 261 72.8
Cfa016079 Carpinus fangiana HOM05D004688 ORTHO05D005490 6.0e-96 354.8 261 72.4
Haze_00366 Corylus avellana HOM05D004688 ORTHO05D005490 9.6e-94 347.4 261 71.6
QL09p020531 Quercus lobata HOM05D004688 ORTHO05D005490 2.8e-93 345.9 268 69.4
Cc04_g10300 Coffea canephora HOM05D004688 ORTHO05D005490 3.6e-93 345.5 249 73.5
DCAR_030965 Daucus carota HOM05D004688 ORTHO05D005490 2.4e-92 342.8 259 71.0
ECA236G0885 Erigeron canadensis HOM05D004688 ORTHO05D005490 2.6e-91 339.3 257 72.0
Oeu047689.1 Olea europaea HOM05D004688 ORTHO05D005490 2.6e-91 339.3 262 71.0
Oeu037809.1 Olea europaea HOM05D004688 ORTHO05D005490 9.9e-91 337.4 262 71.0
SalBow1G7515 Salvia bowleyana HOM05D004688 ORTHO05D005490 2.9e-90 335.9 260 70.8
SGA_v2.0_scaffold163G38052 Striga asiatica HOM05D004688 ORTHO05D005490 6.4e-90 334.7 262 69.5
Migut.E01543 Erythranthe guttata HOM05D004688 ORTHO05D005490 1.1e-89 334.0 261 68.6
HanXRQChr04g0116531 Helianthus annuus HOM05D004688 ORTHO05D005490 1.1e-89 334.0 253 71.5
Manes.08G160300 Manihot esculenta HOM05D004688 ORTHO05D005490 1.9e-89 333.2 261 68.2
Potri.019G042700 Populus trichocarpa HOM05D004688 ORTHO05D005490 2.7e-88 329.3 261 67.4
FAN03G0573 Fragaria x ananassa HOM05D004688 ORTHO05D005490 3.5e-88 328.9 259 70.3
FvH4_7g34310 Fragaria vesca HOM05D004688 ORTHO05D005490 7.9e-88 327.8 259 69.9
FAN01G2619 Fragaria x ananassa HOM05D004688 ORTHO05D005490 7.9e-88 327.8 259 69.9
COL.COLO4_15125 Corchorus olitorius HOM05D004688 ORTHO05D005490 1.3e-87 327.0 262 69.8
Thecc.05G223200 Theobroma cacao HOM05D004688 ORTHO05D005490 1.8e-87 326.6 261 68.6
TAR636G2823 Trochodendron aralioides HOM05D004688 ORTHO05D005490 6.7e-87 324.7 253 70.0
Peaxi162Scf00012g01425 Petunia axillaris HOM05D004688 ORTHO05D005490 8.7e-87 324.3 259 68.3
Lj2A605T63 Lonicera japonica HOM05D004688 ORTHO05D005490 1.9e-86 323.2 307 59.6
RcHm_v2.0_Chr1g0384701 Rosa chinensis HOM05D004688 ORTHO05D005490 3.3e-86 322.4 260 68.1
TAR629G2324 Trochodendron aralioides HOM05D004688 ORTHO05D005490 9.6e-86 320.9 257 67.3
GSVIVG01024321001 Vitis vinifera HOM05D004688 ORTHO05D005490 1.3e-85 320.5 262 65.6
Atru.chr12.1856 Acer truncatum HOM05D004688 ORTHO05D005490 1.6e-85 320.1 266 66.2
Dinv03730 Davidia involucrata HOM05D004688 ORTHO05D005490 1.6e-85 320.1 213 81.2
Ciclev10032005m.g Citrus clementina HOM05D004688 ORTHO05D005490 8.1e-85 317.8 260 67.3
Solyc11g005810.2 Solanum lycopersicum HOM05D004688 ORTHO05D005490 8.1e-85 317.8 259 66.0
Sopen11g001770 Solanum pennellii HOM05D004688 ORTHO05D005490 8.1e-85 317.8 259 66.0
CiPaw.06G036300 Carya illinoinensis HOM05D004688 ORTHO05D005490 1.4e-84 317.0 262 66.8
Aqoxy1G03166 Aquilegia oxysepala HOM05D004688 ORTHO05D005490 3.1e-84 315.8 261 65.9
Duzib128G0049 Durio zibethinus HOM05D004688 ORTHO05D005490 4.0e-84 315.5 274 65.7
PGSC0003DMG400028677 Solanum tuberosum HOM05D004688 ORTHO05D005490 4.0e-84 315.5 259 65.3
MSTRG.1666 Avicennia marina HOM05D004688 ORTHO05D005490 5.3e-84 315.1 260 67.3
Potri.013G076900 Populus trichocarpa HOM05D004688 ORTHO05D005490 6.9e-84 314.7 262 65.6
arahy.Tifrunner.gnm1.ann1.8TRX11 Arachis hypogaea HOM05D004688 ORTHO05D005490 1.5e-83 313.5 263 66.9
arahy.Tifrunner.gnm1.ann1.N6YK28 Arachis hypogaea HOM05D004688 ORTHO05D005490 1.5e-83 313.5 263 66.9
Gohir.D13G162400 Gossypium hirsutum HOM05D004688 ORTHO05D005490 2.0e-83 313.2 253 67.6
Gorai.013G184500 Gossypium raimondii HOM05D004688 ORTHO05D005490 4.5e-83 312.0 256 66.8
Gohir.A13G158100 Gossypium hirsutum HOM05D004688 ORTHO05D005490 7.6e-83 311.2 246 68.7
TWI18G0476 Tripterygium wilfordii HOM05D004688 ORTHO05D005490 1.3e-82 310.5 256 65.2
Prupe.2G329400 Prunus persica HOM05D004688 ORTHO05D005490 2.2e-82 309.7 260 66.9
Gohir.A08G221644 Gossypium hirsutum HOM05D004688 ORTHO05D005490 4.9e-82 308.5 262 66.8
Oeu044132.1 Olea europaea HOM05D004688 ORTHO05D005490 4.9e-82 308.5 260 66.5
Duzib177G0832 Durio zibethinus HOM05D004688 ORTHO05D005490 6.5e-82 308.1 269 65.8
MSTRG.14034 Avicennia marina HOM05D004688 ORTHO05D005490 8.4e-82 307.8 260 66.9
Lj3g0005411 Lotus japonicus HOM05D004688 ORTHO05D005490 8.4e-82 307.8 261 65.5
Duzib106G1350 Durio zibethinus HOM05D004688 ORTHO05D005490 1.4e-81 307.0 262 66.4
TWI12G0369 Tripterygium wilfordii HOM05D004688 ORTHO05D005490 1.4e-81 307.0 258 65.1
Manes.09G130000 Manihot esculenta HOM05D004688 ORTHO05D005490 1.9e-81 306.6 257 65.4
Gohir.D03G055600 Gossypium hirsutum HOM05D004688 ORTHO05D005490 3.2e-81 305.8 261 64.8
Gohir.D08G240400 Gossypium hirsutum HOM05D004688 ORTHO05D005490 3.2e-81 305.8 262 66.4
Gorai.003G058400 Gossypium raimondii HOM05D004688 ORTHO05D005490 3.2e-81 305.8 261 64.8
PSO782G0681 Papaver somniferum HOM05D004688 ORTHO05D005490 4.2e-81 305.4 256 65.2
Gohir.A02G114600 Gossypium hirsutum HOM05D004688 ORTHO05D005490 5.5e-81 305.1 252 65.5
Gorai.004G255700 Gossypium raimondii HOM05D004688 ORTHO05D005490 7.1e-81 304.7 262 66.4
Glyma.12G014100 Glycine max HOM05D004688 ORTHO05D005490 2.1e-80 303.1 264 64.4
PSO063G1904 Papaver somniferum HOM05D004688 ORTHO05D005490 2.7e-80 302.8 256 64.8
HanXRQChr15g0482031 Helianthus annuus HOM05D004688 ORTHO05D005490 2.3e-79 299.7 257 63.8
Glyma.09G222900 Glycine max HOM05D004688 ORTHO05D005490 5.1e-79 298.5 265 64.5
ClCG09G013160 Citrullus lanatus HOM05D004688 ORTHO05D005490 6.7e-79 298.1 260 63.1
Nn3g21937 Nelumbo nucifera HOM05D004688 ORTHO05D005490 1.5e-78 297.0 263 63.5
MBI04_g30768_MAGBIO Magnolia biondii HOM05D004688 ORTHO05D005490 5.7e-78 295.0 250 61.6
Sed0002645 Sechium edule HOM05D004688 ORTHO05D005490 5.7e-78 295.0 260 62.3
CANSAT21G2449 Cannabis sativa HOM05D004688 ORTHO05D005490 2.4e-76 289.7 265 63.0
Eucgr.E02431 Eucalyptus grandis HOM05D004688 ORTHO05D005490 4.1e-76 288.9 251 62.9
VMungo1127G1418 Vigna mungo HOM05D004688 ORTHO05D005490 4.1e-76 288.9 267 62.9
Sabra19G0053300 Salix brachista HOM05D004688 ORTHO05D005490 1.2e-75 287.3 331 51.7
Ca_19600_v3 Cicer arietinum L. HOM05D004688 ORTHO05D005490 1.5e-75 287.0 262 63.0
Nn1g09153 Nelumbo nucifera HOM05D004688 ORTHO05D005490 1.5e-75 287.0 259 62.5
CsaV3_6G036850 Cucumis sativus L. HOM05D004688 ORTHO05D005490 2.0e-75 286.6 254 61.8
Sabra13G0065900 Salix brachista HOM05D004688 ORTHO05D005490 2.6e-75 286.2 327 52.6
TPR.G9830 Trifolium pratense HOM05D004688 ORTHO05D005490 5.9e-75 285.0 266 62.0
MELO3C014341.2 Cucumis melo HOM05D004688 ORTHO05D005490 1.0e-74 284.3 254 61.8
MD07G1032800 Malus domestica HOM05D004688 ORTHO05D005490 3.8e-74 282.3 263 63.1
Sed0013330 Sechium edule HOM05D004688 ORTHO05D005490 5.0e-74 282.0 260 60.4
THA.LOC104805719 Tarenaya hassleriana HOM05D004688 ORTHO05D005490 6.5e-74 281.6 262 61.1
Sc07g0001340 Simmondsia chinensis HOM05D004688 ORTHO05D005490 4.2e-73 278.9 267 58.1
Nn4g25357 Nelumbo nucifera HOM05D004688 ORTHO05D005490 1.0e-71 274.2 262 59.2
FAN10G2489 Fragaria x ananassa HOM05D004688 ORTHO05D005490 1.3e-71 273.9 302 57.0
Lalb_Chr19g0140091 Lupinus albus HOM05D004688 ORTHO05D005490 1.9e-70 270.0 242 65.3
unitig_578.g16583 Utricularia gibba HOM05D004688 ORTHO05D005490 4.3e-70 268.9 256 59.0
CARHR235320 Cardamine hirsuta HOM05D004688 ORTHO05D005490 5.7e-70 268.5 269 57.6
CDE02G1754 Ceratophyllum demersum HOM05D004688 ORTHO05D005490 5.7e-70 268.5 258 57.0
AT4G27620 Arabidopsis thaliana HOM05D004688 ORTHO05D005490 4.8e-69 265.4 254 59.4
Sp7g25570 Schrenkiella parvula HOM05D004688 ORTHO05D005490 8.2e-69 264.6 255 59.2
THA.LOC104823796 Tarenaya hassleriana HOM05D004688 ORTHO05D005490 1.1e-68 264.2 268 59.0
Psat0s643g0040 Pisum sativum HOM05D004688 ORTHO05D005490 1.4e-68 263.8 264 60.2
Nitab4.5_0000877g0060 Nicotiana tabacum HOM05D004688 ORTHO05D005490 1.8e-68 263.5 260 59.6
MD01G1239500 Malus domestica HOM05D004688 ORTHO05D005490 3.1e-68 262.7 256 60.2
Aa31LG5G12060 Aethionema arabicum HOM05D004688 ORTHO05D003121 4.1e-68 262.3 258 57.8
EL10Ac6g14347 Beta vulgaris HOM05D004688 ORTHO05D005490 5.3e-68 261.9 262 57.6
CDE11G1120 Ceratophyllum demersum HOM05D004688 ORTHO05D005490 5.3e-68 261.9 258 56.2
Carub.0007s1324 Capsella rubella HOM05D004688 ORTHO05D005490 9.1e-68 261.2 261 58.2
Carub.0007s1323 Capsella rubella HOM05D004688 ORTHO05D005490 1.2e-67 260.8 253 59.3
Sp7g25560 Schrenkiella parvula HOM05D004688 ORTHO05D005490 4.5e-67 258.8 258 55.8
Medtr0004s0230 Medicago truncatula HOM05D004688 ORTHO05D005490 7.7e-67 258.1 248 62.5
Thhalv10025690m.g Eutrema salsugineum HOM05D004688 ORTHO05D005490 1.0e-66 257.7 253 58.9
Thhalv10025651m.g Eutrema salsugineum HOM05D004688 ORTHO05D005490 1.3e-66 257.3 259 57.5
Lalb_Chr03g0024311 Lupinus albus HOM05D004688 ORTHO05D005490 2.2e-66 256.5 240 63.3
Lalb_Chr01g0000741 Lupinus albus HOM05D004688 ORTHO05D005490 3.8e-66 255.8 267 57.7
AL7G25110 Arabidopsis lyrata HOM05D004688 ORTHO05D005490 1.4e-65 253.8 263 57.4
AT4G27610 Arabidopsis thaliana HOM05D004688 ORTHO05D005490 1.4e-65 253.8 262 57.6
CARHR235310 Cardamine hirsuta HOM05D004688 ORTHO05D005490 1.4e-65 253.8 260 58.8
THA.LOC104821693 Tarenaya hassleriana HOM05D004688 ORTHO05D005490 3.2e-65 252.7 251 59.0
AUR62002842 Chenopodium quinoa HOM05D004688 ORTHO05D005490 1.2e-64 250.8 271 53.5
AUR62037307 Chenopodium quinoa HOM05D004688 ORTHO05D005490 1.2e-64 250.8 261 54.0
BcaNung01654 Brassica carinata HOM05D004688 ORTHO05D005490 3.0e-63 246.1 260 54.6
Ah.02g127670 Amaranthus hybridus HOM05D004688 ORTHO05D005490 1.1e-62 244.2 259 55.6
PGR142G2085 Punica granatum HOM05D004688 ORTHO05D005490 5.7e-62 241.9 250 56.8
BcaC06g32678 Brassica carinata HOM05D004688 ORTHO05D005490 1.3e-61 240.7 263 53.6
Lsat_1_v5_gn_7_27441 Lactuca sativa HOM05D005861 ORTHO05D007151 2.8e-61 239.6 187 72.2
BolC7t46040H Brassica oleracea HOM05D004688 ORTHO05D005490 1.1e-60 237.7 258 55.4
A01p18910 Brassica napus HOM05D004688 ORTHO05D005490 1.4e-60 237.3 253 57.7
BraA01t01832Z Brassica rapa HOM05D004688 ORTHO05D005490 1.8e-60 236.9 253 57.7
BcaC09g50575 Brassica carinata HOM05D004688 ORTHO05D005490 3.1e-60 236.1 255 54.9
BraA01t01828Z Brassica rapa HOM05D004688 ORTHO05D005490 3.1e-60 236.1 255 55.3
Ah.03g138260 Amaranthus hybridus HOM05D004688 ORTHO05D005490 4.1e-60 235.7 261 54.0
BolC1t02329H Brassica oleracea HOM05D004688 ORTHO05D005490 5.3e-60 235.3 255 55.7
A01p18850 Brassica napus HOM05D004688 ORTHO05D005490 6.9e-60 235.0 255 55.3
A03p57380 Brassica napus HOM05D004688 ORTHO05D005490 6.9e-60 235.0 255 53.7
BraA03t14804Z Brassica rapa HOM05D004688 ORTHO05D005490 6.9e-60 235.0 255 53.7
C01p23780 Brassica napus HOM05D004688 ORTHO05D005490 4.5e-59 232.3 256 55.9
Phvul.011G017000 Phaseolus vulgaris HOM05D004688 ORTHO05D005490 5.9e-59 231.9 195 69.2
BcaC09g50567 Brassica carinata HOM05D004688 ORTHO05D005490 1.0e-58 231.1 253 55.3
BolC1t02331H Brassica oleracea HOM05D004688 ORTHO05D005490 1.0e-58 231.1 253 55.3
Actinidia06638 Actinidia chinensis HOM05D004688 ORTHO05D005490 5.0e-58 228.8 167 76.6
C07p55600 Brassica napus HOM05D004688 ORTHO05D005490 5.0e-58 228.8 258 54.3
C01p23860 Brassica napus HOM05D004688 ORTHO05D005490 5.5e-57 225.3 253 55.3
BcaNung01652 Brassica carinata HOM05D004688 ORTHO05D005490 1.2e-56 224.2 253 54.5
Zm00001eb245400 Zea mays HOM05D004688 ORTHO05D005490 2.1e-56 223.4 241 53.9
Os02g0582200 Oryza sativa ssp. japonica HOM05D004688 ORTHO05D005490 1.4e-55 220.7 254 51.2
Zm00001eb183340 Zea mays HOM05D004688 ORTHO05D005490 1.1e-52 211.1 240 50.8
Migut.A00176 Erythranthe guttata HOM05D004688 ORTHO05D005490 2.2e-50 203.4 248 53.2
AL7G25100 Arabidopsis lyrata HOM05D004688 ORTHO05D005490 6.8e-39 165.2 116 74.1
ATR0829G074 Amborella trichopoda HOM05D004688 ORTHO05D005490 6.3e-37 158.7 241 44.4
Nitab4.5_0000805g0040 Nicotiana tabacum HOM05D004688 ORTHO05D005490 1.7e-34 150.6 145 56.6
HPP92_022761 Vanilla planifolia HOM05D004688 ORTHO05D005490 2.6e-30 136.7 251 38.6
SEGI_37617 Sequoiadendron giganteum HOM05D004688 ORTHO05D005490 5.9e-27 125.6 240 36.7
BcaC06g32679 Brassica carinata HOM05D006163 ORTHO05D007625 7.5e-22 108.6 147 46.9
Oeu004249.1 Olea europaea HOM05D004688 ORTHO05D005490 8.3e-21 105.1 238 34.9
HPP92_004939 Vanilla planifolia HOM05D004688 ORTHO05D005490 2.3e-18 97.1 148 43.2
SGA_v2.0_scaffold249G44960 Striga asiatica HOM05D004688 ORTHO05D005490 3.9e-18 96.3 101 54.5
unitig_8.g5063 Utricularia gibba HOM05D004688 ORTHO05D005490 1.7e-13 80.9 153 37.9
Mapoly0010s0074 Marchantia polymorpha HOM05D017133 ORTHO05D005490 5.0e-10 69.3 295 24.4
SMO367G0918 Selaginella moellendorffii HOM05D004688 ORTHO05D005490 2.5e-09 67.0 72 48.6
HPP92_004940 Vanilla planifolia HOM05D004688 ORTHO05D005490 2.5e-09 67.0 74 50.0
Peaxi162Scf00120g01119 Petunia axillaris HOM05D002883 ORTHO05D003116 1.4e-07 61.2 42 76.2
unitig_8.g5064 Utricularia gibba HOM05D004688 ORTHO05D005490 1.4e-07 61.2 44 72.7

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (6 genes)
Brassica napus (6 genes)
Brassica oleracea (3 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (2 genes)
Carica papaya (0 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (3 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (6 genes)
Gossypium raimondii (3 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (3 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (3 genes)
Nicotiana tabacum (2 genes)
Olea europaea (4 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (2 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (3 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (3 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (3 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings