Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035224 Camellia sinensis var. sinensis HOM05D006471 ORTHO05D008157 1.6e-216 755.7 377 100.0
CSS0032634 Camellia sinensis var. sinensis HOM05D006471 ORTHO05D008157 9.0e-215 750.0 377 98.9
Actinidia04343 Actinidia chinensis HOM05D006471 ORTHO05D008157 1.5e-153 546.6 328 82.3
Hma1.2p1_0044F.1_g026290 Hydrangea macrophylla HOM05D006471 ORTHO05D008157 1.7e-144 516.5 382 70.9
Dinv17647 Davidia involucrata HOM05D000200 ORTHO05D001546 3.2e-143 512.3 382 70.9
Ciclev10031833m.g Citrus clementina HOM05D006471 ORTHO05D008157 6.4e-128 461.5 381 64.8
TAR628G0373 Trochodendron aralioides HOM05D006471 ORTHO05D008157 1.2e-126 457.2 383 64.5
Potri.007G075500 Populus trichocarpa HOM05D006471 ORTHO05D008157 1.7e-125 453.4 384 63.5
CiPaw.05G172000 Carya illinoinensis HOM05D006471 ORTHO05D008157 5.1e-125 451.8 378 61.9
DCAR_002605 Daucus carota HOM05D000200 ORTHO05D001546 5.6e-124 448.4 335 67.2
Atru.chr11.1240 Acer truncatum HOM05D006471 ORTHO05D008157 1.2e-123 447.2 377 63.9
Thecc.02G154800 Theobroma cacao HOM05D006471 ORTHO05D008157 2.8e-123 446.0 359 66.9
Rhsim12G0193800 Rhododendron simsii HOM05D006471 ORTHO05D008157 1.1e-122 444.1 291 75.3
Manes.04G162800 Manihot esculenta HOM05D006471 ORTHO05D008157 5.2e-122 441.8 373 62.7
TWI77G0721 Tripterygium wilfordii HOM05D006471 ORTHO05D008157 2.0e-121 439.9 382 62.0
Haze_11788 Corylus avellana HOM05D006471 ORTHO05D008157 3.4e-121 439.1 377 61.8
vmacro16923 Vaccinium macrocarpon HOM05D006471 ORTHO05D008157 1.3e-120 437.2 273 78.0
TWI74G1585 Tripterygium wilfordii HOM05D006471 ORTHO05D008157 2.9e-120 436.0 381 61.9
Duzib132G0448 Durio zibethinus HOM05D006471 ORTHO05D008157 8.4e-120 434.5 367 63.5
Cfa008776 Carpinus fangiana HOM05D006471 ORTHO05D008157 1.1e-119 434.1 377 61.3
COL.COLO4_33107 Corchorus olitorius HOM05D006471 ORTHO05D008157 1.4e-119 433.7 365 63.3
Gohir.A04G109424 Gossypium hirsutum HOM05D006471 ORTHO05D008157 1.0e-117 427.6 365 61.9
Sopen04g004170 Solanum pennellii HOM05D006471 ORTHO05D008157 3.0e-117 426.0 330 65.8
Solyc04g008990.3 Solanum lycopersicum HOM05D006471 ORTHO05D008157 3.9e-117 425.6 330 65.8
Gorai.012G135400 Gossypium raimondii HOM05D006471 ORTHO05D008157 6.6e-117 424.9 365 61.1
PGSC0003DMG400011512 Solanum tuberosum HOM05D006471 ORTHO05D008157 6.6e-117 424.9 330 66.1
Gohir.D04G148900 Gossypium hirsutum HOM05D006471 ORTHO05D008157 1.1e-116 424.1 365 61.1
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 3.3e-116 422.5 356 62.4
Duzib248G0471 Durio zibethinus HOM05D000200 ORTHO05D001546 2.1e-115 419.9 290 71.4
EL10Ac9g22981 Beta vulgaris HOM05D006471 ORTHO05D008157 1.1e-114 417.5 379 59.9
Cpa.g.sc60.91 Carica papaya HOM05D006471 ORTHO05D008157 3.1e-114 416.0 360 62.5
Thhalv10013886m.g Eutrema salsugineum HOM05D006471 ORTHO05D008157 4.0e-114 415.6 376 59.0
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 9.0e-114 414.5 374 58.3
Lj3A846G60 Lonicera japonica HOM05D006471 ORTHO05D008157 1.2e-113 414.1 272 73.9
PGR142G1667 Punica granatum HOM05D006471 ORTHO05D008157 1.2e-113 414.1 386 58.5
Peaxi162Scf00681g00221 Petunia axillaris HOM05D006471 ORTHO05D008157 1.5e-113 413.7 378 60.1
Psat6g234000 Pisum sativum HOM05D006471 ORTHO05D008157 1.5e-113 413.7 381 58.8
Glyma.10G286400 Glycine max HOM05D006471 ORTHO05D008157 2.0e-113 413.3 376 60.9
RcHm_v2.0_Chr4g0446941 Rosa chinensis HOM05D006471 ORTHO05D008157 2.0e-113 413.3 344 63.7
Phvul.007G014500 Phaseolus vulgaris HOM05D006471 ORTHO05D008157 3.4e-113 412.5 375 59.5
Medtr1g114560 Medicago truncatula HOM05D006471 ORTHO05D008157 4.4e-113 412.1 376 59.0
TPR.G4059 Trifolium pratense HOM05D006471 ORTHO05D008157 4.4e-113 412.1 375 58.7
CAN.G274.15 Capsicum annuum HOM05D006471 ORTHO05D008157 5.8e-113 411.8 331 64.7
AL6G18780 Arabidopsis lyrata HOM05D006471 ORTHO05D008157 7.6e-113 411.4 376 58.2
Eucgr.G02586 Eucalyptus grandis HOM05D006471 ORTHO05D008157 1.3e-112 410.6 386 56.0
Lj5g0013377 Lotus japonicus HOM05D006471 ORTHO05D008157 1.7e-112 410.2 379 59.4
MSTRG.428 Avicennia marina HOM05D006471 ORTHO05D008157 2.9e-112 409.5 352 61.1
Nitab4.5_0004979g0070 Nicotiana tabacum HOM05D006471 ORTHO05D008157 2.9e-112 409.5 348 62.9
Nitab4.5_0005997g0050 Nicotiana tabacum HOM05D006471 ORTHO05D008157 2.9e-112 409.5 348 63.5
CARHR204730 Cardamine hirsuta HOM05D006471 ORTHO05D008157 4.9e-112 408.7 374 58.0
Sp6g34600 Schrenkiella parvula HOM05D006471 ORTHO05D008157 4.9e-112 408.7 373 57.9
VMungo0720G2382 Vigna mungo HOM05D006471 ORTHO05D008157 6.4e-112 408.3 377 59.4
CANSAT78G1799 Cannabis sativa HOM05D006471 ORTHO05D008157 1.4e-111 407.1 373 58.2
FvH4_4g37140 Fragaria vesca HOM05D006471 ORTHO05D008157 4.2e-111 405.6 382 58.6
MSTRG.8091 Avicennia marina HOM05D006471 ORTHO05D008157 7.1e-111 404.8 365 60.5
GSVIVG01034416001 Vitis vinifera HOM05D006471 ORTHO05D008157 2.1e-110 403.3 276 72.1
AT5G08340 Arabidopsis thaliana HOM05D006471 ORTHO05D008157 2.7e-110 402.9 373 57.6
MD16G1004200 Malus domestica HOM05D006471 ORTHO05D008157 2.7e-110 402.9 321 64.8
Sabra07G0063800 Salix brachista HOM05D006471 ORTHO05D008157 3.5e-110 402.5 294 70.4
SalBow2G1748 Salvia bowleyana HOM05D006471 ORTHO05D008157 3.5e-110 402.5 327 64.8
AUR62032950 Chenopodium quinoa HOM05D006471 ORTHO05D008157 2.3e-109 399.8 290 67.6
Carub.0006s0724 Capsella rubella HOM05D006471 ORTHO05D008157 6.6e-109 398.3 374 57.8
CsaV3_5G029010 Cucumis sativus L. HOM05D006471 ORTHO05D008157 6.6e-109 398.3 357 58.0
Ca_11258_v3 Cicer arietinum L. HOM05D000200 ORTHO05D001546 1.3e-107 394.0 290 68.3
Migut.L00869 Erythranthe guttata HOM05D006471 ORTHO05D008157 2.1e-107 393.3 301 67.1
HanXRQChr03g0076951 Helianthus annuus HOM05D006471 ORTHO05D008157 8.1e-107 391.3 288 67.7
Sed0003381 Sechium edule HOM05D006471 ORTHO05D008157 8.1e-107 391.3 306 63.7
AUR62017731 Chenopodium quinoa HOM05D006471 ORTHO05D008157 1.1e-106 391.0 296 65.2
BcaB01g05611 Brassica carinata HOM05D006471 ORTHO05D008157 2.4e-106 389.8 378 55.3
A03p03780 Brassica napus HOM05D006471 ORTHO05D008157 2.4e-106 389.8 379 55.1
Nn8g40194 Nelumbo nucifera HOM05D006471 ORTHO05D008157 3.1e-106 389.4 272 69.9
BraA03t09725Z Brassica rapa HOM05D006471 ORTHO05D008157 4.0e-106 389.0 379 55.4
PSO782G0560 Papaver somniferum HOM05D006471 ORTHO05D008157 4.0e-106 389.0 390 54.6
C03p04260 Brassica napus HOM05D006471 ORTHO05D008157 1.2e-105 387.5 379 55.4
BolC3t12958H Brassica oleracea HOM05D006471 ORTHO05D008157 1.2e-105 387.5 379 55.4
Nn2g12513 Nelumbo nucifera HOM05D006471 ORTHO05D008157 1.5e-105 387.1 377 55.7
arahy.Tifrunner.gnm1.ann1.EW69V8 Arachis hypogaea HOM05D006471 ORTHO05D008157 2.0e-105 386.7 354 59.6
Sc10g0006980 Simmondsia chinensis HOM05D006471 ORTHO05D008157 2.0e-105 386.7 308 63.6
Lalb_Chr06g0163931 Lupinus albus HOM05D006471 ORTHO05D008157 9.9e-105 384.4 309 64.7
MBI06_g44273_MAGBIO Magnolia biondii HOM05D006471 ORTHO05D008157 9.9e-105 384.4 376 56.9
ClCG02G014150 Citrullus lanatus HOM05D006471 ORTHO05D008157 1.3e-104 384.0 411 50.6
PSO170G1614 Papaver somniferum HOM05D006471 ORTHO05D008157 3.8e-104 382.5 388 54.1
Lsat_1_v5_gn_0_15460 Lactuca sativa HOM05D006471 ORTHO05D008157 8.4e-104 381.3 292 66.4
BcaB01g05607 Brassica carinata HOM05D006471 ORTHO05D008157 1.9e-103 380.2 295 63.1
SGA_v2.0_scaffold92G28263 Striga asiatica HOM05D006471 ORTHO05D008157 7.1e-103 378.3 396 54.8
THA.LOC104818378 Tarenaya hassleriana HOM05D006471 ORTHO05D008157 1.6e-102 377.1 379 54.9
THA.LOC104800739 Tarenaya hassleriana HOM05D006471 ORTHO05D008157 3.5e-102 375.9 358 56.1
Cc00_g09970 Coffea canephora HOM05D006471 ORTHO05D008157 1.8e-101 373.6 297 64.3
Ah.16g106450 Amaranthus hybridus HOM05D000154 ORTHO05D000092 2.3e-101 373.2 293 63.5
Oeu006329.1 Olea europaea HOM05D006471 ORTHO05D008157 5.1e-101 372.1 386 55.2
Aqoxy2G01235 Aquilegia oxysepala HOM05D006471 ORTHO05D008157 8.7e-101 371.3 293 63.1
AT5G23330 Arabidopsis thaliana HOM05D006471 ORTHO05D008157 8.7e-101 371.3 344 58.4
Aqoxy2G00030 Aquilegia oxysepala HOM05D006471 ORTHO05D008157 4.3e-100 369.0 293 62.8
SGA_v2.0_scaffold580G53041 Striga asiatica HOM05D006471 ORTHO05D004488 8.1e-99 364.8 341 59.2
AL6G34590 Arabidopsis lyrata HOM05D006471 ORTHO05D008157 2.6e-97 359.8 346 57.2
unitig_749.g13340 Utricularia gibba HOM05D006471 ORTHO05D008157 4.5e-97 359.0 395 51.4
CARHR190210 Cardamine hirsuta HOM05D006471 ORTHO05D008157 1.4e-95 354.0 291 62.2
MELO3C011756.2 Cucumis melo HOM05D006471 ORTHO05D008157 7.1e-95 351.7 469 45.0
CDE02G4670 Ceratophyllum demersum HOM05D006471 ORTHO05D008157 1.6e-91 340.5 291 60.1
ECA240G3241 Erigeron canadensis HOM05D006471 ORTHO05D008157 2.1e-91 340.1 246 66.7
FAN17G0671 Fragaria x ananassa HOM05D006471 ORTHO05D008157 4.8e-91 339.0 258 66.3
SGA_v2.0_scaffold42G16129 Striga asiatica HOM05D006471 ORTHO05D008157 1.4e-90 337.4 408 49.5
ATR0665G473 Amborella trichopoda HOM05D006471 ORTHO05D008157 1.8e-90 337.0 275 63.6
FAN07G1501 Fragaria x ananassa HOM05D002605 ORTHO05D002842 4.5e-89 332.4 257 65.4
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 5.9e-89 332.0 244 68.0
arahy.Tifrunner.gnm1.ann1.V4ETXF Arachis hypogaea HOM05D006471 ORTHO05D008157 1.4e-87 327.4 344 54.1
QL08p056974 Quercus lobata HOM05D006471 ORTHO05D008157 4.2e-87 325.9 227 68.7
Os03g0801700 Oryza sativa ssp. japonica HOM05D006471 ORTHO05D008157 2.1e-86 323.6 273 59.3
Prupe.1G349200 Prunus persica HOM05D006471 ORTHO05D008157 6.1e-86 322.0 238 66.0
Zm00001eb061200 Zea mays HOM05D006471 ORTHO05D008157 6.1e-86 322.0 274 60.9
HPP92_017784 Vanilla planifolia HOM05D006471 ORTHO05D008157 3.2e-79 299.7 277 55.6
MD13G1003200 Malus domestica HOM05D006471 ORTHO05D008157 9.1e-74 281.6 241 62.7
SEGI_40912 Sequoiadendron giganteum HOM05D006471 ORTHO05D008157 1.3e-72 277.7 225 63.1
Carub.0006s2111 Capsella rubella HOM05D006471 ORTHO05D008157 1.5e-68 264.2 230 59.6
Pp3c5_28930 Physcomitrium patens HOM05D006471 ORTHO05D008157 4.4e-68 262.7 228 57.5
Mapoly0019s0104 Marchantia polymorpha HOM05D006471 ORTHO05D008157 7.2e-63 245.4 232 53.4
Pp3c14_5150 Physcomitrium patens HOM05D006471 ORTHO05D008157 7.2e-63 245.4 274 47.8
Glyma.20G102800 Glycine max HOM05D006471 ORTHO05D008157 2.6e-60 236.9 306 46.7
SMO141G0020 Selaginella moellendorffii HOM05D006471 ORTHO05D008157 2.2e-59 233.8 190 57.4
AagrBONN_evm.TU.Sc2ySwM_362.1554 Anthoceros agrestis HOM05D006471 ORTHO05D008157 2.7e-41 173.7 140 58.6
FAN12G2193 Fragaria x ananassa HOM05D006471 ORTHO05D008157 2.3e-40 170.6 138 64.5
MCO07G267 Micromonas commoda HOM05D006471 ORTHO05D008157 3.8e-40 169.9 203 44.8
Sc06g0004050 Simmondsia chinensis HOM05D006471 ORTHO05D008157 1.1e-34 151.8 146 58.2
QL08p056966 Quercus lobata HOM05D006471 ORTHO05D008157 3.3e-23 113.6 68 79.4
Carub.0006s2110 Capsella rubella HOM05D006471 ORTHO05D008157 8.1e-22 109.0 122 55.7
Cre13.g607600 Chlamydomonas reinhardtii HOM05D006471 ORTHO05D008157 5.2e-21 106.3 296 29.7
arahy.Tifrunner.gnm1.ann1.SQAN1F Arachis hypogaea HOM05D006471 ORTHO05D008157 3.8e-11 73.6 47 72.3
BolC9t53696H Brassica oleracea HOM05D006471 ORTHO05D008157 3.2e-10 70.5 80 43.8
SEGI_34336 Sequoiadendron giganteum HOM05D006471 ORTHO05D008157 2.1e-06 57.8 33 87.9

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (3 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (3 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (4 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings