Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035089 Camellia sinensis var. sinensis HOM05D022698 ORTHO05D004160 4.1e-63 244.6 127 100.0
CSS0045012 Camellia sinensis var. sinensis HOM05D022698 ORTHO05D004160 1.8e-58 229.2 130 93.8
CSS0043297 Camellia sinensis var. sinensis HOM05D022698 ORTHO05D004160 1.8e-42 176.0 218 53.2
CSS0032101 Camellia sinensis var. sinensis HOM05D022698 ORTHO05D004160 1.3e-27 126.7 127 60.6
CSS0010226 Camellia sinensis var. sinensis HOM05D022698 ORTHO05D004160 1.6e-27 126.3 126 60.3
Hma1.2p1_1936F.1_g308180 Hydrangea macrophylla HOM05D003700 ORTHO05D004160 3.8e-24 115.2 130 56.2
Hma1.2p1_1936F.1_g308170 Hydrangea macrophylla HOM05D003700 ORTHO05D004160 6.5e-24 114.4 128 56.2
Hma1.2p1_2516F.1_g323665 Hydrangea macrophylla HOM05D003700 ORTHO05D004160 6.5e-24 114.4 128 56.2
Dinv19966 Davidia involucrata HOM05D003700 ORTHO05D004160 1.4e-23 113.2 135 54.1
Actinidia37626 Actinidia chinensis HOM05D003700 ORTHO05D004160 3.3e-20 102.1 130 51.5
Dinv38714 Davidia involucrata HOM05D003700 ORTHO05D004160 4.3e-20 101.7 134 52.2
Sc12g0006380 Simmondsia chinensis HOM05D003700 ORTHO05D004160 1.3e-19 100.1 115 47.8
PGSC0003DMG400033045 Solanum tuberosum HOM05D003700 ORTHO05D004160 1.3e-19 100.1 124 50.8
TAR622G0031 Trochodendron aralioides HOM05D003700 ORTHO05D004160 1.6e-19 99.8 91 60.4
Prupe.5G193800 Prunus persica HOM05D003700 ORTHO05D004160 1.4e-18 96.7 127 49.6
Nitab4.5_0011015g0030 Nicotiana tabacum HOM05D003700 ORTHO05D004160 2.4e-18 95.9 106 52.8
TAR371G1074 Trochodendron aralioides HOM05D003700 ORTHO05D004160 4.1e-18 95.1 84 59.5
Sopen06g027060 Solanum pennellii HOM05D003700 ORTHO05D004160 5.3e-18 94.7 123 48.0
FAN08G2213 Fragaria x ananassa HOM05D003700 ORTHO05D004160 9.0e-18 94.0 123 51.2
Actinidia04888 Actinidia chinensis HOM05D003700 ORTHO05D004160 2.0e-17 92.8 128 49.2
Solyc06g069770.3 Solanum lycopersicum HOM05D003700 ORTHO05D004160 2.6e-17 92.4 123 47.2
CAN.G628.1 Capsicum annuum HOM05D003700 ORTHO05D004160 4.5e-17 91.7 113 50.4
MD14G1200600 Malus domestica HOM05D003700 ORTHO05D004160 5.9e-17 91.3 127 48.0
Atru.chr11.2689 Acer truncatum HOM05D003700 ORTHO05D004160 1.7e-16 89.7 107 53.3
Haze_07324 Corylus avellana HOM05D003700 ORTHO05D004160 1.7e-16 89.7 132 43.9
Cfa018940 Carpinus fangiana HOM05D003700 ORTHO05D004160 2.2e-16 89.4 133 45.9
Sabra05G0035300 Salix brachista HOM05D003700 ORTHO05D004160 2.2e-16 89.4 129 45.7
AUR62021675 Chenopodium quinoa HOM05D003700 ORTHO05D004160 2.9e-16 89.0 117 50.4
Nitab4.5_0007189g0070 Nicotiana tabacum HOM05D003700 ORTHO05D004160 3.8e-16 88.6 128 48.4
FAN18G4275 Fragaria x ananassa HOM05D003700 ORTHO05D004160 6.5e-16 87.8 125 46.4
Sed0020544 Sechium edule HOM05D003700 ORTHO05D004160 6.5e-16 87.8 128 46.9
CiPaw.11G044800 Carya illinoinensis HOM05D003700 ORTHO05D004160 1.1e-15 87.0 130 43.8
PSO832G2691 Papaver somniferum HOM05D003700 ORTHO05D004160 1.9e-15 86.3 106 50.0
CsaV3_1G002330 Cucumis sativus L. HOM05D003700 ORTHO05D004160 2.5e-15 85.9 128 46.1
Duzib205G1944 Durio zibethinus HOM05D003700 ORTHO05D004160 7.2e-15 84.3 125 45.6
FvH4_5g14920 Fragaria vesca HOM05D003700 ORTHO05D004160 9.4e-15 84.0 125 45.6
MELO3C017173.2 Cucumis melo HOM05D003700 ORTHO05D004160 1.2e-14 83.6 112 46.4
AUR62008420 Chenopodium quinoa HOM05D003700 ORTHO05D004160 2.1e-14 82.8 123 47.2
FAN04G3111 Fragaria x ananassa HOM05D003700 ORTHO05D004160 2.1e-14 82.8 125 44.8
FAN13G0273 Fragaria x ananassa HOM05D003700 ORTHO05D004160 2.1e-14 82.8 125 44.8
Nn3g17245 Nelumbo nucifera HOM05D003700 ORTHO05D004160 4.6e-14 81.6 126 41.3
FAN13G0167 Fragaria x ananassa HOM05D003700 ORTHO05D004160 6.1e-14 81.3 125 44.0
CANSAT56G3341 Cannabis sativa HOM05D003700 ORTHO05D004160 7.9e-14 80.9 111 44.1
TWI81G0244 Tripterygium wilfordii HOM05D003700 ORTHO05D004160 7.9e-14 80.9 127 44.1
RcHm_v2.0_Chr7g0181461 Rosa chinensis HOM05D003700 ORTHO05D004160 1.0e-13 80.5 124 46.0
PGR083G2029 Punica granatum HOM05D003700 ORTHO05D004160 1.8e-13 79.7 141 40.4
vmacro11460 Vaccinium macrocarpon HOM05D003700 ORTHO05D004160 1.8e-13 79.7 59 64.4
ECA247G0346 Erigeron canadensis HOM05D003700 ORTHO05D004160 3.9e-13 78.6 117 46.2
ClCG06G016210 Citrullus lanatus HOM05D003700 ORTHO05D004160 5.1e-13 78.2 133 42.1
SGA_v2.0_scaffold7G04064 Striga asiatica HOM05D003700 ORTHO05D004160 6.7e-13 77.8 119 44.5
MSTRG.9629 Avicennia marina HOM05D003700 ORTHO05D004160 1.1e-12 77.0 92 48.9
CDE04G0998 Ceratophyllum demersum HOM05D004763 ORTHO05D007492 1.5e-12 76.6 81 50.6
Ciclev10022133m.g Citrus clementina HOM05D003700 ORTHO05D004160 3.3e-12 75.5 117 42.7
Lalb_Chr08g0235721 Lupinus albus HOM05D003700 ORTHO05D004160 3.3e-12 75.5 82 54.9
CDE08G0283 Ceratophyllum demersum HOM05D003700 ORTHO05D004160 5.7e-12 74.7 81 45.7
Gohir.D03G093300 Gossypium hirsutum HOM05D003700 ORTHO05D004160 5.7e-12 74.7 121 43.8
Gorai.003G097200 Gossypium raimondii HOM05D003700 ORTHO05D004160 5.7e-12 74.7 121 43.8
Nitab4.5_0001128g0150 Nicotiana tabacum HOM05D003700 ORTHO05D004160 5.7e-12 74.7 73 56.2
Cc04_g16600 Coffea canephora HOM05D003700 ORTHO05D004160 7.4e-12 74.3 141 40.4
Nitab4.5_0006000g0030 Nicotiana tabacum HOM05D003700 ORTHO05D004160 7.4e-12 74.3 127 44.1
QL10p017042 Quercus lobata HOM05D003700 ORTHO05D004160 9.7e-12 73.9 74 54.1
Gohir.D11G035000 Gossypium hirsutum HOM05D003700 ORTHO05D004160 1.7e-11 73.2 125 41.6
Sabra13G0024600 Salix brachista HOM05D003700 ORTHO05D004160 1.7e-11 73.2 131 40.5
Thecc.03G087800 Theobroma cacao HOM05D003700 ORTHO05D004160 1.7e-11 73.2 125 42.4
Gohir.A11G031331 Gossypium hirsutum HOM05D003700 ORTHO05D004160 2.2e-11 72.8 122 41.0
Gorai.007G037700 Gossypium raimondii HOM05D003700 ORTHO05D004160 2.2e-11 72.8 116 41.4
HanXRQChr04g0107321 Helianthus annuus HOM05D003700 ORTHO05D004160 2.8e-11 72.4 106 45.3
Lj5A110T129 Lonicera japonica HOM05D003700 ORTHO05D004160 3.7e-11 72.0 88 53.4
Atru.chr9.273 Acer truncatum HOM05D003700 ORTHO05D004160 4.8e-11 71.6 99 45.5
Sed0006743 Sechium edule HOM05D003700 ORTHO05D004160 4.8e-11 71.6 105 44.8
PSO013G0046 Papaver somniferum HOM05D003700 ORTHO05D004160 8.2e-11 70.9 106 42.5
THA.LOC104821421 Tarenaya hassleriana HOM05D003700 ORTHO05D004160 8.2e-11 70.9 124 42.7
Gohir.A03G066800 Gossypium hirsutum HOM05D003700 ORTHO05D004160 1.1e-10 70.5 121 42.1
Medtr3g435580 Medicago truncatula HOM05D003700 ORTHO05D004160 1.4e-10 70.1 129 40.3
Eucgr.B00508 Eucalyptus grandis HOM05D003700 ORTHO05D004160 1.8e-10 69.7 58 58.6
MD06G1193500 Malus domestica HOM05D003700 ORTHO05D004160 1.8e-10 69.7 43 74.4
PGSC0003DMG400019531 Solanum tuberosum HOM05D003700 ORTHO05D004160 2.4e-10 69.3 121 43.0
SGA_v2.0_scaffold114G31908 Striga asiatica HOM05D003700 ORTHO05D004160 2.4e-10 69.3 118 44.1
HPP92_005935 Vanilla planifolia HOM05D003700 ORTHO05D004160 3.1e-10 68.9 43 65.1
Lsat_1_v5_gn_1_13920 Lactuca sativa HOM05D003700 ORTHO05D004160 4.1e-10 68.6 131 40.5
Gohir.A11G031511 Gossypium hirsutum HOM05D003700 ORTHO05D004160 6.9e-10 67.8 79 49.4
Oeu047295.1 Olea europaea HOM05D003700 ORTHO05D004160 6.9e-10 67.8 109 42.2
arahy.Tifrunner.gnm1.ann1.4WDU0A Arachis hypogaea HOM05D003700 ORTHO05D004160 1.2e-09 67.0 109 36.7
Sc04g0002660 Simmondsia chinensis HOM05D003700 ORTHO05D004160 1.2e-09 67.0 129 41.1
EL10Ac5g11021 Beta vulgaris HOM05D003700 ORTHO05D004160 1.5e-09 66.6 125 41.6
SalBow7G0736 Salvia bowleyana HOM05D003700 ORTHO05D004160 1.5e-09 66.6 121 41.3
Solyc03g116020.3 Solanum lycopersicum HOM05D003700 ORTHO05D004160 1.5e-09 66.6 121 42.1
Peaxi162Scf00013g00333 Petunia axillaris HOM05D003700 ORTHO05D004160 2.0e-09 66.2 117 36.8
Potri.005G033100 Populus trichocarpa HOM05D003700 ORTHO05D004160 2.6e-09 65.9 148 36.5
Nn4g23176 Nelumbo nucifera HOM05D003700 ORTHO05D004160 4.5e-09 65.1 38 71.1
Lj4g0000044 Lotus japonicus HOM05D003700 ORTHO05D004160 5.9e-09 64.7 121 42.1
Manes.06G092100 Manihot esculenta HOM05D003700 ORTHO05D004160 7.7e-09 64.3 127 38.6
unitig_62.g23549 Utricularia gibba HOM05D003700 ORTHO05D004160 7.7e-09 64.3 39 71.8
HanXRQChr02g0043591 Helianthus annuus HOM05D003700 ORTHO05D004160 1.3e-08 63.5 75 46.7
COL.COLO4_32291 Corchorus olitorius HOM05D003700 ORTHO05D004160 1.7e-08 63.2 116 36.2
A06p29150 Brassica napus HOM05D003700 ORTHO05D004160 2.2e-08 62.8 104 36.5
Lalb_Chr23g0273811 Lupinus albus HOM05D003700 ORTHO05D004160 2.2e-08 62.8 83 48.2
Sopen03g035010 Solanum pennellii HOM05D003700 ORTHO05D004160 2.2e-08 62.8 121 40.5
CAN.G837.20 Capsicum annuum HOM05D003700 ORTHO05D004160 2.9e-08 62.4 104 40.4
TPR.G11909 Trifolium pratense HOM05D003700 ORTHO05D004160 2.9e-08 62.4 71 50.7
Potri.013G021800 Populus trichocarpa HOM05D003700 ORTHO05D004160 5.0e-08 61.6 54 50.0
Phvul.003G190000 Phaseolus vulgaris HOM05D003700 ORTHO05D004160 6.5e-08 61.2 112 42.0
Aa31LG4G16330 Aethionema arabicum HOM05D003700 ORTHO05D004160 8.5e-08 60.8 122 38.5
Phvul.009G187000 Phaseolus vulgaris HOM05D003700 ORTHO05D004160 8.5e-08 60.8 140 37.1
COL.COLO4_35537 Corchorus olitorius HOM05D003700 ORTHO05D004160 1.4e-07 60.1 42 59.5
Migut.D01816 Erythranthe guttata HOM05D003700 ORTHO05D004160 1.4e-07 60.1 126 38.1
DCAR_016563 Daucus carota HOM05D003700 ORTHO05D004160 1.9e-07 59.7 118 37.3
Lj1g0000196 Lotus japonicus HOM05D003700 ORTHO05D004160 1.9e-07 59.7 130 37.7
Psat5g193120 Pisum sativum HOM05D003700 ORTHO05D004160 1.9e-07 59.7 43 62.8
arahy.Tifrunner.gnm1.ann1.6Q68A3 Arachis hypogaea HOM05D003700 ORTHO05D004160 2.5e-07 59.3 128 32.8
Hund02648 Selenicereus undatus HOM05D003700 ORTHO05D004160 3.2e-07 58.9 129 37.2
Glyma.05G026600 Glycine max HOM05D003700 ORTHO05D004160 4.2e-07 58.5 121 40.5
ATR1127G116 Amborella trichopoda HOM05D003700 ORTHO05D004160 7.2e-07 57.8 54 48.1
Potri.013G022500 Populus trichocarpa HOM05D003700 ORTHO05D004160 7.2e-07 57.8 119 38.7
SEGI_41222 Sequoiadendron giganteum HOM05D003700 ORTHO05D004160 7.2e-07 57.8 75 42.7
BraA06t25863Z Brassica rapa HOM05D003700 ORTHO05D004160 9.4e-07 57.4 104 35.6
BolC3t18700H Brassica oleracea HOM05D003700 ORTHO05D004160 1.2e-06 57.0 94 36.2
A02p42310 Brassica napus HOM05D003700 ORTHO05D004160 1.6e-06 56.6 120 40.0
BraA02t09160Z Brassica rapa HOM05D003700 ORTHO05D004160 1.6e-06 56.6 120 40.0
Carub.0008s2312 Capsella rubella HOM05D003700 ORTHO05D004160 1.6e-06 56.6 104 37.5
Glyma.17G100300 Glycine max HOM05D003700 ORTHO05D004160 2.1e-06 56.2 109 38.5
arahy.Tifrunner.gnm1.ann1.G7C7PJ Arachis hypogaea HOM05D003700 ORTHO05D004160 2.7e-06 55.8 127 36.2
arahy.Tifrunner.gnm1.ann1.N073K6 Arachis hypogaea HOM05D003700 ORTHO05D004160 2.7e-06 55.8 112 32.1
COL.COLO4_05649 Corchorus olitorius HOM05D001496 ORTHO05D007453 2.7e-06 55.8 101 38.6
Gohir.D11G034700 Gossypium hirsutum HOM05D003700 ORTHO05D004160 2.7e-06 55.8 136 36.0
VMungo1309G1081 Vigna mungo HOM05D003700 ORTHO05D004160 2.7e-06 55.8 141 33.3
BcaC01g02471 Brassica carinata HOM05D003700 ORTHO05D004160 3.6e-06 55.5 104 35.6
C03p64440 Brassica napus HOM05D003700 ORTHO05D004160 3.6e-06 55.5 104 35.6
Zm00001eb401550 Zea mays HOM05D003700 ORTHO05D004160 3.6e-06 55.5 33 66.7
BolC2t12276H Brassica oleracea HOM05D003700 ORTHO05D004160 4.7e-06 55.1 120 40.0
Medtr2g094530 Medicago truncatula HOM05D003700 ORTHO05D004160 4.7e-06 55.1 83 43.4
Pp3c23_7150 Physcomitrium patens HOM05D003700 ORTHO05D004160 4.7e-06 55.1 90 43.3
VMungo1215G2263 Vigna mungo HOM05D003700 ORTHO05D004160 4.7e-06 55.1 109 37.6
BcaC03g18149 Brassica carinata HOM05D003700 ORTHO05D004160 7.9e-06 54.3 38 57.9
C02p62180 Brassica napus HOM05D003700 ORTHO05D004160 7.9e-06 54.3 38 57.9

Acer truncatum (2 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (5 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (3 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (6 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (3 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (2 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (4 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (3 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (0 genes)
Zea mays (1 genes)

Program Settings