Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034897 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 2.2e-100 369.0 189 100.0
CSS0007838 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 1.5e-37 160.2 193 54.9
CSS0024470 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 2.6e-13 79.7 52 78.8
CSS0037546 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 1.0e-12 77.8 58 72.4
CSS0018520 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 2.9e-12 76.3 63 68.3
CSS0018436 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 3.8e-12 75.9 91 51.6
CSS0000457 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 6.5e-12 75.1 53 83.0
CSS0002516 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D014145 2.5e-11 73.2 93 51.6
CSS0024000 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 9.3e-11 71.2 130 40.8
CSS0037793 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 3.0e-09 66.2 54 74.1
CSS0000571 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D014145 6.7e-09 65.1 58 65.5
Migut.L00037 Erythranthe guttata HOM05D002906 ORTHO05D003211 9.7e-08 61.2 43 76.7
MD15G1249300 Malus domestica HOM05D002906 ORTHO05D003211 9.7e-08 61.2 43 76.7
Psat0s765g0200 Pisum sativum HOM05D002906 ORTHO05D003211 9.7e-08 61.2 43 76.7
Rhsim02G0110000 Rhododendron simsii HOM05D000561 ORTHO05D000514 1.3e-07 60.8 58 56.9
TAR376G0542 Trochodendron aralioides HOM05D000561 ORTHO05D000514 1.3e-07 60.8 58 55.2
CSS0029324 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 1.6e-07 60.5 54 70.4
PGR102G3213 Punica granatum HOM05D002906 ORTHO05D003211 1.6e-07 60.5 43 76.7
Aa31LG8G15270 Aethionema arabicum HOM05D002906 ORTHO05D003211 2.2e-07 60.1 43 76.7
BcaC04g22930 Brassica carinata HOM05D002906 ORTHO05D003211 2.2e-07 60.1 43 76.7
BraA09t36816Z Brassica rapa HOM05D002906 ORTHO05D003211 2.2e-07 60.1 43 76.7
RcHm_v2.0_Chr2g0099941 Rosa chinensis HOM05D002906 ORTHO05D003211 2.2e-07 60.1 43 74.4
TWI38G1654 Tripterygium wilfordii HOM05D000561 ORTHO05D000514 2.2e-07 60.1 58 53.4
vmacro15814 Vaccinium macrocarpon HOM05D000561 ORTHO05D000514 2.2e-07 60.1 58 56.9
Potri.007G016100 Populus trichocarpa HOM05D002906 ORTHO05D003211 2.8e-07 59.7 43 74.4
AL3G51270 Arabidopsis lyrata HOM05D002906 ORTHO05D003211 3.7e-07 59.3 43 76.7
EL10Ac4g07825 Beta vulgaris HOM05D000561 ORTHO05D000514 3.7e-07 59.3 58 55.2
A09p11710 Brassica napus HOM05D002906 ORTHO05D003211 3.7e-07 59.3 82 48.8
CSS0012027 Camellia sinensis var. sinensis HOM05D004755 ORTHO05D014145 3.7e-07 59.3 58 62.1
HanXRQChr01g0004251 Helianthus annuus HOM05D000561 ORTHO05D000514 3.7e-07 59.3 58 55.2
Hma1.2p1_1142F.1_g261000 Hydrangea macrophylla HOM05D000561 ORTHO05D000514 3.7e-07 59.3 58 56.9
Eucgr.J02394 Eucalyptus grandis HOM05D002906 ORTHO05D003211 4.8e-07 58.9 43 74.4
HanXRQChr14g0441611 Helianthus annuus HOM05D002906 ORTHO05D003211 4.8e-07 58.9 43 74.4
Manes.01G142700 Manihot esculenta HOM05D002906 ORTHO05D003211 4.8e-07 58.9 43 74.4
Manes.02G101100 Manihot esculenta HOM05D002906 ORTHO05D003211 4.8e-07 58.9 43 74.4
Oeu021940.2 Olea europaea HOM05D002906 ORTHO05D003211 4.8e-07 58.9 43 74.4
BcaB02g10717 Brassica carinata HOM05D002906 ORTHO05D003211 6.3e-07 58.5 43 74.4
BcaNung00749 Brassica carinata HOM05D002906 ORTHO05D003211 6.3e-07 58.5 43 74.4
Cfa000238 Carpinus fangiana HOM05D000561 ORTHO05D000514 6.3e-07 58.5 60 55.0
Haze_06784 Corylus avellana HOM05D000561 ORTHO05D000514 6.3e-07 58.5 60 55.0
Dinv13881 Davidia involucrata HOM05D000561 ORTHO05D000514 6.3e-07 58.5 58 55.2
Nn004s41401 Nelumbo nucifera HOM05D000561 ORTHO05D000514 6.3e-07 58.5 58 53.4
Sp3g31530 Schrenkiella parvula HOM05D002906 ORTHO05D003211 6.3e-07 58.5 43 74.4
AL7G14840 Arabidopsis lyrata HOM05D002906 ORTHO05D003211 8.2e-07 58.2 43 72.1
AT4G36210 Arabidopsis thaliana HOM05D002906 ORTHO05D003211 8.2e-07 58.2 43 72.1
Carub.0003s3223 Capsella rubella HOM05D002906 ORTHO05D003211 8.2e-07 58.2 43 74.4
ECA248G3614 Erigeron canadensis HOM05D000561 ORTHO05D000514 8.2e-07 58.2 58 51.7
TAR629G1691 Trochodendron aralioides HOM05D000561 ORTHO05D000514 8.2e-07 58.2 58 51.7
GSVIVG01018828001 Vitis vinifera HOM05D002906 ORTHO05D003211 8.2e-07 58.2 73 52.1
GSVIVG01037635001 Vitis vinifera HOM05D000561 ORTHO05D000514 8.2e-07 58.2 58 53.4
BolC9t54266H Brassica oleracea HOM05D002906 ORTHO05D003211 1.1e-06 57.8 43 74.4
CSS0032337 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D111661 1.1e-06 57.8 46 65.2
AUR62015756 Chenopodium quinoa HOM05D000561 ORTHO05D000514 1.1e-06 57.8 57 54.4
AUR62020459 Chenopodium quinoa HOM05D000561 ORTHO05D000514 1.1e-06 57.8 57 54.4
PGR119G1069 Punica granatum HOM05D000561 ORTHO05D000514 1.1e-06 57.8 60 56.7
TWI63G1003 Tripterygium wilfordii HOM05D000561 ORTHO05D000514 1.1e-06 57.8 58 51.7
CSS0015791 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 1.4e-06 57.4 58 53.4
CSS0025985 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 1.4e-06 57.4 58 53.4
CSS0036243 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 1.4e-06 57.4 58 53.4
Ca_24895_v3 Cicer arietinum L. HOM05D002906 ORTHO05D003211 1.4e-06 57.4 43 74.4
ClCG07G008870 Citrullus lanatus HOM05D002906 ORTHO05D003211 1.4e-06 57.4 43 72.1
Ciclev10025097m.g Citrus clementina HOM05D002906 ORTHO05D003211 1.4e-06 57.4 43 72.1
COL.COLO4_21964 Corchorus olitorius HOM05D002906 ORTHO05D003211 1.4e-06 57.4 43 72.1
MELO3C017538.2 Cucumis melo HOM05D002906 ORTHO05D003211 1.4e-06 57.4 43 72.1
CsaV3_4G005320 Cucumis sativus L. HOM05D002906 ORTHO05D003211 1.4e-06 57.4 43 72.1
Dinv40056 Davidia involucrata HOM05D002906 ORTHO05D003211 1.4e-06 57.4 43 72.1
Oeu007584.1 Olea europaea HOM05D000561 ORTHO05D000514 1.4e-06 57.4 99 39.4
Sed0023539 Sechium edule HOM05D002906 ORTHO05D003211 1.4e-06 57.4 43 72.1
Solyc07g064510.3 Solanum lycopersicum HOM05D000561 ORTHO05D000514 1.4e-06 57.4 60 50.0
Sopen07g032710 Solanum pennellii HOM05D000561 ORTHO05D000514 1.4e-06 57.4 60 50.0
PGSC0003DMG400022220 Solanum tuberosum HOM05D000561 ORTHO05D000514 1.4e-06 57.4 60 50.0
CSS0004530 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D014145 1.8e-06 57.0 91 41.8
Glyma.11G074300 Glycine max HOM05D002906 ORTHO05D003211 1.8e-06 57.0 43 72.1
Manes.03G128501 Manihot esculenta HOM05D000561 ORTHO05D000514 1.8e-06 57.0 58 55.2
Manes.15G072700 Manihot esculenta HOM05D000561 ORTHO05D000514 1.8e-06 57.0 58 55.2
Nn1g03553 Nelumbo nucifera HOM05D000561 ORTHO05D000514 1.8e-06 57.0 58 51.7
Solyc02g084540.3 Solanum lycopersicum HOM05D002906 ORTHO05D003211 1.8e-06 57.0 85 47.1
HPP92_022296 Vanilla planifolia HOM05D002906 ORTHO05D003211 1.8e-06 57.0 43 74.4
Zm00001eb219820 Zea mays HOM05D000561 ORTHO05D000514 1.8e-06 57.0 58 50.0
Atru.chr2.3353 Acer truncatum HOM05D000561 ORTHO05D000514 2.4e-06 56.6 63 49.2
AT2G18100 Arabidopsis thaliana HOM05D002906 ORTHO05D003211 2.4e-06 56.6 43 74.4
CSS0010447 Camellia sinensis var. sinensis HOM05D000740 ORTHO05D014145 2.4e-06 56.6 45 75.6
CARHR108580 Cardamine hirsuta HOM05D002906 ORTHO05D003211 2.4e-06 56.6 43 74.4
Cc07_g10390 Coffea canephora HOM05D002906 ORTHO05D003211 2.4e-06 56.6 43 74.4
Duzib235G1019 Durio zibethinus HOM05D000561 ORTHO05D000514 2.4e-06 56.6 63 46.0
Lsat_1_v5_gn_7_17700 Lactuca sativa HOM05D000561 ORTHO05D000514 2.4e-06 56.6 58 51.7
QL08p010560 Quercus lobata HOM05D000561 ORTHO05D000514 2.4e-06 56.6 58 53.4
Thecc.06G218500 Theobroma cacao HOM05D000561 ORTHO05D000514 2.4e-06 56.6 63 47.6
Zm00001eb404060 Zea mays HOM05D002906 ORTHO05D003211 2.4e-06 56.6 43 72.1
BcaB07g31685 Brassica carinata HOM05D002906 ORTHO05D003211 3.1e-06 56.2 82 47.6
Medtr3g113090 Medicago truncatula HOM05D002906 ORTHO05D003211 3.1e-06 56.2 43 69.8
QL05p073542 Quercus lobata HOM05D000561 ORTHO05D000514 3.1e-06 56.2 60 51.7
QL05p073781 Quercus lobata HOM05D000561 ORTHO05D000514 3.1e-06 56.2 60 51.7
SGA_v2.0_scaffold51G18781 Striga asiatica HOM05D002906 ORTHO05D003211 3.1e-06 56.2 43 69.8
TPR.G31196 Trifolium pratense HOM05D002906 ORTHO05D003211 3.1e-06 56.2 43 69.8
TAR627G0058 Trochodendron aralioides HOM05D000561 ORTHO05D000514 3.1e-06 56.2 58 50.0
unitig_736.g22362 Utricularia gibba HOM05D002906 ORTHO05D003211 3.1e-06 56.2 43 72.1
Gohir.A10G013600 Gossypium hirsutum HOM05D000561 ORTHO05D000514 4.1e-06 55.8 58 50.0
Gohir.D10G013500 Gossypium hirsutum HOM05D000561 ORTHO05D000514 4.1e-06 55.8 58 50.0
Gorai.011G015300 Gossypium raimondii HOM05D000561 ORTHO05D000514 4.1e-06 55.8 58 50.0
Lj1A1228G74 Lonicera japonica HOM05D000561 ORTHO05D000514 4.1e-06 55.8 58 51.7
Os03g0569900 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D000514 4.1e-06 55.8 58 48.3
HPP92_005831 Vanilla planifolia HOM05D000561 ORTHO05D000514 4.1e-06 55.8 66 45.5
HPP92_005856 Vanilla planifolia HOM05D000561 ORTHO05D000514 4.1e-06 55.8 66 45.5
HPP92_005912 Vanilla planifolia HOM05D000561 ORTHO05D000514 4.1e-06 55.8 66 45.5
arahy.Tifrunner.gnm1.ann1.3CX1XJ Arachis hypogaea HOM05D000561 ORTHO05D000514 5.3e-06 55.5 65 49.2
arahy.Tifrunner.gnm1.ann1.A2FF76 Arachis hypogaea HOM05D002906 ORTHO05D003211 5.3e-06 55.5 43 67.4
arahy.Tifrunner.gnm1.ann1.K7AB56 Arachis hypogaea HOM05D002906 ORTHO05D003211 5.3e-06 55.5 43 67.4
Eucgr.F03462 Eucalyptus grandis HOM05D000561 ORTHO05D000514 5.3e-06 55.5 58 55.2
Nn6g32236 Nelumbo nucifera HOM05D002906 ORTHO05D003211 5.3e-06 55.5 43 72.1
Phvul.006G150400 Phaseolus vulgaris HOM05D000561 ORTHO05D000514 5.3e-06 55.5 59 50.8
SHI08582 Sapria himalayana HOM05D002906 ORTHO05D003211 5.3e-06 55.5 43 67.4
Ah.06g186280 Amaranthus hybridus HOM05D000561 ORTHO05D000514 6.9e-06 55.1 69 44.9
CSS0005865 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D111724 6.9e-06 55.1 40 70.0
Ca_09159_v3 Cicer arietinum L. HOM05D000561 ORTHO05D000514 6.9e-06 55.1 60 51.7
COL.COLO4_31755 Corchorus olitorius HOM05D000561 ORTHO05D000514 6.9e-06 55.1 58 50.0
Duzib187G0760 Durio zibethinus HOM05D002906 ORTHO05D003211 6.9e-06 55.1 43 69.8
C09p13780 Brassica napus HOM05D002906 ORTHO05D003211 9.0e-06 54.7 43 72.1
CiPaw.10G069900 Carya illinoinensis HOM05D000561 ORTHO05D000514 9.0e-06 54.7 60 51.7
CiPaw.11G188400 Carya illinoinensis HOM05D000561 ORTHO05D000514 9.0e-06 54.7 58 51.7
Ca_14896_v3 Cicer arietinum L. HOM05D000280 ORTHO05D000514 9.0e-06 54.7 63 47.6
Thhalv10022586m.g Eutrema salsugineum HOM05D002906 ORTHO05D003211 9.0e-06 54.7 43 72.1
Gohir.A13G138500 Gossypium hirsutum HOM05D000561 ORTHO05D000514 9.0e-06 54.7 58 50.0
Hma1.2p1_0673F.1_g201260 Hydrangea macrophylla HOM05D000561 ORTHO05D000514 9.0e-06 54.7 58 50.0
Hma1.2p1_0743F.1_g211410 Hydrangea macrophylla HOM05D002906 ORTHO05D003211 9.0e-06 54.7 43 67.4
Lsat_1_v5_gn_2_78381 Lactuca sativa HOM05D002906 ORTHO05D003211 9.0e-06 54.7 43 67.4
MD03G1202200 Malus domestica HOM05D000561 ORTHO05D000514 9.0e-06 54.7 58 51.7
MD11G1219500 Malus domestica HOM05D000561 ORTHO05D000514 9.0e-06 54.7 58 51.7
Oeu020118.2 Olea europaea HOM05D000561 ORTHO05D000514 9.0e-06 54.7 58 48.3

Acer truncatum (1 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (3 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (20 genes)
Cannabis sativa (0 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (3 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (1 genes)
Gossypium hirsutum (3 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (3 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (3 genes)
Manihot esculenta (4 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (3 genes)
Nicotiana tabacum (0 genes)
Olea europaea (3 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (0 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (2 genes)
Quercus lobata (3 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (4 genes)
Vigna mungo (0 genes)
Vitis vinifera (2 genes)
Zea mays (2 genes)

Program Settings