Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034809 Camellia sinensis var. sinensis HOM05D005306 ORTHO05D006158 3.1e-212 741.5 369 100.0
Actinidia36600 Actinidia chinensis HOM05D005306 ORTHO05D006158 2.1e-152 542.7 375 72.8
Dinv21926 Davidia involucrata HOM05D005306 ORTHO05D006158 7.9e-131 471.1 378 65.9
Dinv16302 Davidia involucrata HOM05D005306 ORTHO05D006158 3.1e-111 406.0 360 62.5
vmacro12947 Vaccinium macrocarpon HOM05D005306 ORTHO05D006158 7.2e-108 394.8 347 61.4
TAR625G0717 Trochodendron aralioides HOM05D005306 ORTHO05D006158 2.8e-83 313.2 392 46.2
QL06p049976 Quercus lobata HOM05D005306 ORTHO05D006158 1.8e-82 310.5 377 49.3
TAR381G0610 Trochodendron aralioides HOM05D005306 ORTHO05D006158 5.2e-82 308.9 390 46.2
Lj4A885T20 Lonicera japonica HOM05D005306 ORTHO05D006158 1.2e-81 307.8 372 49.2
CiPaw.04G097600 Carya illinoinensis HOM05D005306 ORTHO05D006158 8.3e-80 301.6 377 47.7
Manes.12G136900 Manihot esculenta HOM05D005306 ORTHO05D006158 1.8e-74 283.9 377 47.2
Cc07_g15400 Coffea canephora HOM05D005306 ORTHO05D006158 2.6e-73 280.0 379 44.6
Haze_24956 Corylus avellana HOM05D005306 ORTHO05D006158 8.3e-72 275.0 396 42.2
QL04p017893 Quercus lobata HOM05D005306 ORTHO05D006158 8.3e-72 275.0 379 45.9
Cfa002685 Carpinus fangiana HOM05D005306 ORTHO05D006158 1.4e-71 274.2 381 43.0
CiPaw.03G140300 Carya illinoinensis HOM05D005306 ORTHO05D006158 2.4e-71 273.5 332 47.0
Ciclev10025982m.g Citrus clementina HOM05D005306 ORTHO05D006158 2.4e-71 273.5 369 43.9
Cpa.g.sc20.237 Carica papaya HOM05D005306 ORTHO05D006158 1.7e-69 267.3 370 43.8
Atru.chr4.126 Acer truncatum HOM05D005306 ORTHO05D006158 3.3e-68 263.1 385 45.5
Nn5g29063 Nelumbo nucifera HOM05D005306 ORTHO05D006158 1.5e-65 254.2 375 42.4
Prupe.6G182000 Prunus persica HOM05D005306 ORTHO05D006158 2.9e-64 250.0 393 42.7
Potri.007G090500 Populus trichocarpa HOM05D005306 ORTHO05D006158 4.9e-64 249.2 367 43.6
Sabra07G0074200 Salix brachista HOM05D005306 ORTHO05D006158 1.2e-62 244.6 366 43.2
TWI77G0207 Tripterygium wilfordii HOM05D005306 ORTHO05D006158 3.5e-62 243.0 373 42.9
Nn1g05302 Nelumbo nucifera HOM05D005306 ORTHO05D006158 6.0e-62 242.3 387 40.1
Thecc.01G104400 Theobroma cacao HOM05D005306 ORTHO05D006158 6.6e-61 238.8 375 42.1
Potri.005G077400 Populus trichocarpa HOM05D005306 ORTHO05D006158 8.6e-61 238.4 367 43.1
MD01G1027000 Malus domestica HOM05D005306 ORTHO05D006158 2.1e-59 233.8 388 41.8
TWI53G1353 Tripterygium wilfordii HOM05D005306 ORTHO05D006158 6.2e-59 232.3 361 42.1
GSVIVG01004251001 Vitis vinifera HOM05D005306 ORTHO05D006158 1.1e-58 231.5 312 48.4
Oeu032161.1 Olea europaea HOM05D005306 ORTHO05D006158 1.8e-58 230.7 401 40.1
Oeu032163.1 Olea europaea HOM05D005306 ORTHO05D006158 1.8e-58 230.7 401 40.1
FAN28G0785 Fragaria x ananassa HOM05D005306 ORTHO05D006158 4.0e-58 229.6 377 40.3
FAN23G1139 Fragaria x ananassa HOM05D005306 ORTHO05D006158 3.4e-57 226.5 373 40.2
Gohir.D12G096600 Gossypium hirsutum HOM05D005306 ORTHO05D006158 4.4e-57 226.1 375 41.6
Gorai.008G104700 Gossypium raimondii HOM05D005306 ORTHO05D006158 4.4e-57 226.1 375 41.6
Gohir.A12G079125 Gossypium hirsutum HOM05D005306 ORTHO05D006158 5.8e-57 225.7 375 41.9
FAN26G1901 Fragaria x ananassa HOM05D005306 ORTHO05D006158 7.6e-57 225.3 378 40.7
FvH4_1g21240 Fragaria vesca HOM05D005306 ORTHO05D006158 2.2e-56 223.8 378 40.7
Eucgr.H04811 Eucalyptus grandis HOM05D005306 ORTHO05D006158 4.9e-56 222.6 385 38.7
ClCG01G018910 Citrullus lanatus HOM05D005306 ORTHO05D006158 8.3e-56 221.9 371 41.8
MD15G1327000 Malus domestica HOM05D005306 ORTHO05D006158 3.2e-55 219.9 388 40.5
RcHm_v2.0_Chr2g0115081 Rosa chinensis HOM05D005306 ORTHO05D006158 5.4e-55 219.2 380 42.1
Sed0001570 Sechium edule HOM05D005306 ORTHO05D006158 1.2e-54 218.0 382 39.0
Gohir.A11G052900 Gossypium hirsutum HOM05D005306 ORTHO05D006158 1.6e-54 217.6 368 42.1
Duzib147G0288 Durio zibethinus HOM05D005306 ORTHO05D006158 2.3e-53 213.8 171 64.3
COL.COLO4_09939 Corchorus olitorius HOM05D005306 ORTHO05D006158 3.0e-53 213.4 368 39.9
PGSC0003DMG400020626 Solanum tuberosum HOM05D005306 ORTHO05D006158 3.9e-53 213.0 388 37.9
DCAR_014236 Daucus carota HOM05D005306 ORTHO05D006158 8.6e-53 211.8 355 42.0
Gorai.007G061500 Gossypium raimondii HOM05D005306 ORTHO05D006158 1.9e-52 210.7 368 40.5
AUR62003775 Chenopodium quinoa HOM05D005306 ORTHO05D006158 2.1e-51 207.2 395 36.2
Sopen04g024710 Solanum pennellii HOM05D005306 ORTHO05D006158 3.6e-51 206.5 389 36.5
Solyc04g054900.3 Solanum lycopersicum HOM05D005306 ORTHO05D006158 1.1e-50 204.9 387 37.0
Peaxi162Scf00422g00025 Petunia axillaris HOM05D005306 ORTHO05D006158 1.4e-50 204.5 376 37.8
MELO3C007770.2 Cucumis melo HOM05D005306 ORTHO05D006158 5.2e-50 202.6 375 40.0
AUR62002025 Chenopodium quinoa HOM05D005306 ORTHO05D006158 7.6e-49 198.7 392 34.7
Migut.H02371 Erythranthe guttata HOM05D005306 ORTHO05D006158 4.2e-47 193.0 439 34.2
FAN19G0499 Fragaria x ananassa HOM05D005306 ORTHO05D006158 7.1e-47 192.2 356 38.8
Lsat_1_v5_gn_4_141700 Lactuca sativa HOM05D005306 ORTHO05D006158 1.6e-46 191.0 367 37.9
MBI05_g34472_MAGBIO Magnolia biondii HOM05D005306 ORTHO05D006158 1.0e-45 188.3 423 33.6
CsaV3_6G045590 Cucumis sativus L. HOM05D005306 ORTHO05D006158 1.7e-45 187.6 368 38.6
THA.LOC104819305 Tarenaya hassleriana HOM05D005306 ORTHO05D006158 4.3e-44 183.0 380 33.2
HanXRQChr15g0484181 Helianthus annuus HOM05D005306 ORTHO05D006158 7.3e-44 182.2 390 36.7
THA.LOC104818490 Tarenaya hassleriana HOM05D005306 ORTHO05D006158 2.1e-43 180.6 367 32.7
Gohir.D11G056300 Gossypium hirsutum HOM05D005306 ORTHO05D006158 6.2e-43 179.1 340 39.4
SalBow3G4455 Salvia bowleyana HOM05D005306 ORTHO05D006158 3.1e-42 176.8 486 31.1
Nitab4.5_0004120g0030 Nicotiana tabacum HOM05D005306 ORTHO05D006158 4.0e-42 176.4 363 37.7
Aa31LG1G16850 Aethionema arabicum HOM05D005306 ORTHO05D006158 1.5e-41 174.5 375 34.1
PGR102G1853 Punica granatum HOM05D005306 ORTHO05D006158 1.5e-41 174.5 343 38.2
ECA232G0837 Erigeron canadensis HOM05D005306 ORTHO05D006158 2.6e-41 173.7 165 56.4
CAN.G113.1 Capsicum annuum HOM05D005306 ORTHO05D006158 4.4e-41 172.9 389 33.9
Hund13638 Selenicereus undatus HOM05D005306 ORTHO05D006158 7.6e-41 172.2 328 36.3
Aqoxy6G00585 Aquilegia oxysepala HOM05D005306 ORTHO05D006158 2.2e-40 170.6 375 36.5
MSTRG.23333 Avicennia marina HOM05D005306 ORTHO05D006158 2.2e-40 170.6 287 39.0
Nitab4.5_0000104g0330 Nicotiana tabacum HOM05D005306 ORTHO05D006158 8.4e-40 168.7 357 36.4
CANSAT01G2249 Cannabis sativa HOM05D005306 ORTHO05D006158 9.3e-39 165.2 229 44.5
PSO210G6319 Papaver somniferum HOM05D005306 ORTHO05D006158 9.3e-39 165.2 168 50.6
EL10Ac6g15084 Beta vulgaris HOM05D005306 ORTHO05D006158 1.6e-38 164.5 392 33.2
MSTRG.2558 Avicennia marina HOM05D005306 ORTHO05D006158 7.8e-38 162.2 360 34.4
Lsat_1_v5_gn_5_43440 Lactuca sativa HOM05D005306 ORTHO05D006158 7.8e-38 162.2 332 38.0
Phvul.002G254400 Phaseolus vulgaris HOM05D005306 ORTHO05D006158 3.9e-37 159.8 369 32.8
AL8G42620 Arabidopsis lyrata HOM05D005306 ORTHO05D006158 5.1e-37 159.5 370 33.0
Thhalv10004547m.g Eutrema salsugineum HOM05D005306 ORTHO05D006158 1.5e-36 157.9 365 32.3
BraA06t26127Z Brassica rapa HOM05D005306 ORTHO05D006158 1.6e-35 154.5 365 31.8
Sp2g28200 Schrenkiella parvula HOM05D005306 ORTHO05D006158 6.2e-35 152.5 364 31.6
arahy.Tifrunner.gnm1.ann1.U0X1YR Arachis hypogaea HOM05D005306 ORTHO05D006158 8.1e-35 152.1 355 35.5
BcaC01g02741 Brassica carinata HOM05D005306 ORTHO05D006158 8.1e-35 152.1 365 32.1
C03p61010 Brassica napus HOM05D005306 ORTHO05D006158 8.1e-35 152.1 365 32.1
BolC3t18363H Brassica oleracea HOM05D005306 ORTHO05D006158 8.1e-35 152.1 365 32.1
VMungo0251G2777 Vigna mungo HOM05D005306 ORTHO05D006158 8.1e-35 152.1 371 31.5
A06p31940 Brassica napus HOM05D005306 ORTHO05D006158 1.8e-34 151.0 365 30.7
arahy.Tifrunner.gnm1.ann1.H9PZRL Arachis hypogaea HOM05D005306 ORTHO05D006158 3.1e-34 150.2 355 35.8
Carub.0008s2596 Capsella rubella HOM05D005306 ORTHO05D006158 3.1e-34 150.2 360 33.6
BcaB02g09863 Brassica carinata HOM05D005306 ORTHO05D006158 1.5e-33 147.9 368 30.4
Ah.02g122180 Amaranthus hybridus HOM05D005306 ORTHO05D006158 2.0e-33 147.5 384 35.2
Carub.0006s0857 Capsella rubella HOM05D005306 ORTHO05D006158 2.0e-33 147.5 355 31.0
SGA_v2.0_scaffold47G17761 Striga asiatica HOM05D005306 ORTHO05D006158 3.4e-33 146.7 407 30.7
Medtr8g090365 Medicago truncatula HOM05D005306 ORTHO05D006158 4.5e-33 146.4 367 34.9
Sp6g33290 Schrenkiella parvula HOM05D005306 ORTHO05D006158 4.5e-33 146.4 207 40.6
Psat7g054080 Pisum sativum HOM05D005306 ORTHO05D006158 7.6e-33 145.6 368 35.1
Thhalv10014214m.g Eutrema salsugineum HOM05D005306 ORTHO05D006158 4.9e-32 142.9 142 50.7
AT5G10110 Arabidopsis thaliana HOM05D005306 ORTHO05D006158 7.1e-31 139.0 365 30.1
Lalb_Chr07g0185101 Lupinus albus HOM05D005306 ORTHO05D006158 2.1e-30 137.5 210 40.0
Ca_17725_v3 Cicer arietinum L. HOM05D005306 ORTHO05D006158 6.0e-30 136.0 363 33.3
AL6G20570 Arabidopsis lyrata HOM05D005306 ORTHO05D006158 7.9e-30 135.6 365 29.3
CARHR203180 Cardamine hirsuta HOM05D005306 ORTHO05D006158 1.0e-29 135.2 143 46.9
Lalb_Chr13g0296051 Lupinus albus HOM05D005306 ORTHO05D006158 1.0e-29 135.2 133 54.9
A03p04410 Brassica napus HOM05D005306 ORTHO05D006158 1.8e-29 134.4 151 49.7
BraA03t09786Z Brassica rapa HOM05D005306 ORTHO05D006158 1.8e-29 134.4 151 49.7
AT5G65120 Arabidopsis thaliana HOM05D005306 ORTHO05D006158 5.1e-29 132.9 151 47.7
C03p04880 Brassica napus HOM05D005306 ORTHO05D006158 6.7e-29 132.5 151 48.3
BolC3t13020H Brassica oleracea HOM05D005306 ORTHO05D006158 6.7e-29 132.5 151 48.3
CARHR279030 Cardamine hirsuta HOM05D005306 ORTHO05D006158 8.7e-29 132.1 358 32.1
Sed0017418 Sechium edule HOM05D005306 ORTHO05D006158 3.3e-28 130.2 357 33.9
BcaC04g23269 Brassica carinata HOM05D005306 ORTHO05D006158 7.4e-28 129.0 368 30.7
BraA09t36544Z Brassica rapa HOM05D005306 ORTHO05D006158 1.3e-27 128.3 128 50.8
TWI74G0266 Tripterygium wilfordii HOM05D005306 ORTHO05D006158 3.7e-27 126.7 268 35.1
Lj4g0005197 Lotus japonicus HOM05D005306 ORTHO05D006158 4.8e-27 126.3 347 33.1
BcaB04g20004 Brassica carinata HOM05D005306 ORTHO05D006158 4.0e-26 123.2 278 31.7
C09p10370 Brassica napus HOM05D005306 ORTHO05D006158 4.0e-26 123.2 118 50.8
BolC9t53937H Brassica oleracea HOM05D005306 ORTHO05D006158 4.0e-26 123.2 118 50.8
TPR.G2173 Trifolium pratense HOM05D005306 ORTHO05D006158 3.4e-25 120.2 115 55.7
Os02g0752300 Oryza sativa ssp. japonica HOM05D005306 ORTHO05D006158 6.5e-24 115.9 138 44.9
Lj2C552G1 Lonicera japonica HOM05D005306 ORTHO05D006158 3.2e-23 113.6 212 40.1
Glyma.08G137700 Glycine max HOM05D005306 ORTHO05D006158 1.6e-22 111.3 364 28.3
THA.LOC104801720 Tarenaya hassleriana HOM05D005306 ORTHO05D006158 2.7e-22 110.5 284 30.6
A09p08930 Brassica napus HOM05D005306 ORTHO05D006158 2.5e-20 104.0 106 50.9
Aa31LG3G17030 Aethionema arabicum HOM05D005306 ORTHO05D006158 1.6e-19 101.3 239 31.0
Hund16271 Selenicereus undatus HOM05D005306 ORTHO05D006158 1.8e-18 97.8 376 29.3
Ah.03g142470 Amaranthus hybridus HOM05D005306 ORTHO05D006158 3.1e-18 97.1 293 31.7
Zm00001eb194230 Zea mays HOM05D005306 ORTHO05D006158 2.6e-17 94.0 119 43.7
PSO447G0179 Papaver somniferum HOM05D005306 ORTHO05D006158 3.4e-17 93.6 168 35.1
ATR0564G355 Amborella trichopoda HOM05D005306 ORTHO05D006158 2.2e-16 90.9 132 42.4
Glyma.05G180000 Glycine max HOM05D005306 ORTHO05D006158 1.9e-15 87.8 359 26.5
CDE10G0726 Ceratophyllum demersum HOM05D005306 ORTHO05D006158 9.3e-15 85.5 105 46.7
unitig_27.g25362 Utricularia gibba HOM05D033148 ORTHO05D006158 6.1e-14 82.8 225 30.2
SGA_v2.0_scaffold34G13602 Striga asiatica HOM05D005306 ORTHO05D006158 6.7e-13 79.3 396 26.5
BcaB02g09865 Brassica carinata HOM05D005306 ORTHO05D006158 8.2e-11 72.4 88 43.2
SEGI_16914 Sequoiadendron giganteum HOM05D003400 ORTHO05D003687 1.8e-10 71.2 129 34.9
Sc16g0005560 Simmondsia chinensis HOM05D005306 ORTHO05D006158 2.4e-10 70.9 106 37.7
HPP92_004303 Vanilla planifolia HOM05D005306 ORTHO05D006158 1.7e-08 64.7 120 35.0
CDE10G0861 Ceratophyllum demersum HOM05D005306 ORTHO05D006158 4.2e-07 60.1 69 46.4
AagrBONN_evm.TU.Sc2ySwM_344.4066 Anthoceros agrestis HOM05D003400 ORTHO05D003687 1.6e-06 58.2 136 32.4
Nn5g26847 Nelumbo nucifera HOM05D003400 ORTHO05D003687 7.9e-06 55.8 142 28.9

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (2 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (5 genes)
Brassica napus (6 genes)
Brassica oleracea (3 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (2 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (3 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (2 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (3 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings