Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034260 Camellia sinensis var. sinensis HOM05D006420 ORTHO05D008009 8.8e-145 516.9 259 100.0
CSS0037657 Camellia sinensis var. sinensis HOM05D006420 ORTHO05D008009 5.7e-144 514.2 259 99.6
Actinidia05697 Actinidia chinensis HOM05D006420 ORTHO05D008009 1.1e-113 413.7 266 76.7
Dinv23938 Davidia involucrata HOM05D006420 ORTHO05D008009 1.4e-110 403.3 281 74.4
Lj9A85G78 Lonicera japonica HOM05D006420 ORTHO05D008009 1.5e-107 393.3 269 72.5
Lj9A86G16 Lonicera japonica HOM05D006420 ORTHO05D008009 1.9e-107 392.9 269 72.5
Hma1.2p1_0928F.1_g237740 Hydrangea macrophylla HOM05D006420 ORTHO05D008009 9.5e-107 390.6 265 72.8
RhsimUnG0226900 Rhododendron simsii HOM05D006420 ORTHO05D008009 1.3e-103 380.2 256 75.8
GSVIVG01000081001 Vitis vinifera HOM05D006420 ORTHO05D008009 4.1e-102 375.2 268 69.4
Hund21694 Selenicereus undatus HOM05D006420 ORTHO05D008009 3.5e-101 372.1 265 71.3
Solyc01g099130.3 Solanum lycopersicum HOM05D006420 ORTHO05D008009 3.9e-100 368.6 270 67.0
Sopen01g042690 Solanum pennellii HOM05D006420 ORTHO05D008009 3.9e-100 368.6 270 67.0
MSTRG.5100 Avicennia marina HOM05D006420 ORTHO05D008009 6.6e-100 367.9 270 66.3
PGSC0003DMG400024687 Solanum tuberosum HOM05D006420 ORTHO05D008009 8.6e-100 367.5 270 66.7
TAR636G1821 Trochodendron aralioides HOM05D006420 ORTHO05D008009 5.6e-99 364.8 284 65.8
TAR365G0270 Trochodendron aralioides HOM05D006420 ORTHO05D008009 9.5e-99 364.0 281 67.3
Aqoxy5G00493 Aquilegia oxysepala HOM05D006420 ORTHO05D008009 2.1e-98 362.8 271 65.3
Manes.08G120400 Manihot esculenta HOM05D006420 ORTHO05D008009 6.2e-98 361.3 263 65.8
Nitab4.5_0000137g0140 Nicotiana tabacum HOM05D006420 ORTHO05D008009 6.2e-98 361.3 270 65.6
Lsat_1_v5_gn_9_123421 Lactuca sativa HOM05D006420 ORTHO05D008009 1.1e-97 360.5 264 68.2
vmacro05011 Vaccinium macrocarpon HOM05D006420 ORTHO05D008009 1.8e-97 359.8 224 79.0
Gohir.A08G210900 Gossypium hirsutum HOM05D006420 ORTHO05D008009 3.1e-97 359.0 261 68.2
Gohir.D08G227700 Gossypium hirsutum HOM05D006420 ORTHO05D008009 3.1e-97 359.0 261 68.2
Gorai.004G241900 Gossypium raimondii HOM05D006420 ORTHO05D008009 3.1e-97 359.0 261 68.2
COL.COLO4_13456 Corchorus olitorius HOM05D006420 ORTHO05D008009 8.9e-97 357.5 261 68.6
Nn1g02269 Nelumbo nucifera HOM05D006420 ORTHO05D008009 1.3e-95 353.6 280 65.4
Oeu010909.1 Olea europaea HOM05D006420 ORTHO05D008009 1.3e-95 353.6 263 66.5
Nn4g26277 Nelumbo nucifera HOM05D006420 ORTHO05D008009 4.9e-95 351.7 231 75.3
Thecc.05G302400 Theobroma cacao HOM05D006420 ORTHO05D008009 4.9e-95 351.7 237 71.7
Sed0005627 Sechium edule HOM05D006420 ORTHO05D008009 3.2e-94 349.0 267 67.4
EL10Ac4g09358 Beta vulgaris HOM05D006420 ORTHO05D008009 4.2e-94 348.6 261 62.8
CAN.G1034.41 Capsicum annuum HOM05D006420 ORTHO05D008009 5.4e-94 348.2 242 68.6
AUR62000819 Chenopodium quinoa HOM05D006420 ORTHO05D008009 5.4e-94 348.2 261 64.4
PGR083G0891 Punica granatum HOM05D006420 ORTHO05D008009 7.1e-94 347.8 263 65.0
Peaxi162Scf00037g00513 Petunia axillaris HOM05D006420 ORTHO05D008009 9.2e-94 347.4 228 71.5
Duzib177G0348 Durio zibethinus HOM05D006420 ORTHO05D008009 1.2e-93 347.1 259 65.6
Cc02_g33350 Coffea canephora HOM05D006420 ORTHO05D008009 2.7e-93 345.9 227 71.8
PSO210G7816 Papaver somniferum HOM05D006420 ORTHO05D008009 4.6e-93 345.1 267 64.8
Cfa006594 Carpinus fangiana HOM05D006420 ORTHO05D008009 1.7e-92 343.2 224 73.7
AUR62005152 Chenopodium quinoa HOM05D006420 ORTHO05D008009 6.6e-92 341.3 272 62.5
CANSAT54G1557 Cannabis sativa HOM05D006420 ORTHO05D008009 1.5e-91 340.1 263 63.9
DCAR_029409 Daucus carota HOM05D006420 ORTHO05D008009 4.3e-91 338.6 224 72.8
Prupe.6G324800 Prunus persica HOM05D006420 ORTHO05D008009 9.6e-91 337.4 267 62.2
FAN14G2531 Fragaria x ananassa HOM05D006420 ORTHO05D008009 2.1e-90 336.3 269 62.5
Sc06g0003280 Simmondsia chinensis HOM05D006420 ORTHO05D008009 4.7e-90 335.1 224 73.2
CiPaw.07G020700 Carya illinoinensis HOM05D006420 ORTHO05D008009 8.1e-90 334.3 224 71.9
Glyma.20G234300 Glycine max HOM05D006420 ORTHO05D008009 8.1e-90 334.3 258 63.6
Ah.04g160290 Amaranthus hybridus HOM05D006420 ORTHO05D008009 1.1e-89 334.0 256 64.8
Psat6g150480 Pisum sativum HOM05D006420 ORTHO05D008009 2.4e-89 332.8 261 64.4
Cfa006595 Carpinus fangiana HOM05D006420 ORTHO05D008009 3.1e-89 332.4 224 71.4
Migut.N01987 Erythranthe guttata HOM05D006420 ORTHO05D008009 3.1e-89 332.4 275 61.5
Migut.N02012 Erythranthe guttata HOM05D006420 ORTHO05D008009 3.1e-89 332.4 275 61.5
Lalb_Chr21g0310681 Lupinus albus HOM05D006420 ORTHO05D008009 9.0e-89 330.9 262 63.7
MD04G1204800 Malus domestica HOM05D006420 ORTHO05D008009 9.0e-89 330.9 264 62.9
Phvul.007G179700 Phaseolus vulgaris HOM05D006420 ORTHO05D008009 9.0e-89 330.9 257 63.0
CsaV3_2G005340 Cucumis sativus L. HOM05D006420 ORTHO05D008009 1.2e-88 330.5 272 63.2
Cpa.g.sc48.61 Carica papaya HOM05D006420 ORTHO05D008009 1.5e-88 330.1 261 63.2
Ciclev10002177m.g Citrus clementina HOM05D006420 ORTHO05D008009 1.5e-88 330.1 267 64.8
HPP92_020377 Vanilla planifolia HOM05D006420 ORTHO05D008009 3.4e-88 328.9 260 63.5
MD12G1218500 Malus domestica HOM05D006420 ORTHO05D008009 5.8e-88 328.2 263 61.6
Duzib106G1877 Durio zibethinus HOM05D006420 ORTHO05D008009 9.9e-88 327.4 224 70.5
Ca_10114_v3 Cicer arietinum L. HOM05D006420 ORTHO05D008009 6.4e-87 324.7 227 69.2
Glyma.10G154000 Glycine max HOM05D006420 ORTHO05D008009 8.4e-87 324.3 261 60.9
RcHm_v2.0_Chr3g0454981 Rosa chinensis HOM05D006420 ORTHO05D008009 8.4e-87 324.3 281 59.4
arahy.Tifrunner.gnm1.ann1.GHU2GX Arachis hypogaea HOM05D006420 ORTHO05D008009 1.1e-86 323.9 227 70.5
ClCG02G015760 Citrullus lanatus HOM05D006420 ORTHO05D008009 1.1e-86 323.9 272 61.8
FAN09G3808 Fragaria x ananassa HOM05D006420 ORTHO05D008009 5.4e-86 321.6 271 59.0
FvH4_6g06020 Fragaria vesca HOM05D006420 ORTHO05D008009 9.3e-86 320.9 269 60.2
THA.LOC104820863 Tarenaya hassleriana HOM05D006420 ORTHO05D008009 9.3e-86 320.9 262 59.9
QL03p007116 Quercus lobata HOM05D006420 ORTHO05D008009 1.2e-85 320.5 267 60.7
arahy.Tifrunner.gnm1.ann1.7ESY4D Arachis hypogaea HOM05D006420 ORTHO05D008009 1.6e-85 320.1 227 69.6
TWI56G0424 Tripterygium wilfordii HOM05D006420 ORTHO05D008009 2.1e-85 319.7 270 60.7
TPR.G6113 Trifolium pratense HOM05D006420 ORTHO05D008009 6.0e-85 318.2 228 66.7
ATR0332G062 Amborella trichopoda HOM05D006420 ORTHO05D008009 1.0e-84 317.4 269 58.4
Atru.chr2.393 Acer truncatum HOM05D006420 ORTHO05D008009 1.7e-84 316.6 266 60.5
VMungo0720G1765 Vigna mungo HOM05D006420 ORTHO05D008009 5.1e-84 315.1 260 60.0
FAN05G3282 Fragaria x ananassa HOM05D006420 ORTHO05D008009 2.5e-83 312.8 270 58.5
ECA232G4325 Erigeron canadensis HOM05D006420 ORTHO05D008009 2.1e-82 309.7 222 69.8
Nitab4.5_0005541g0070 Nicotiana tabacum HOM05D006420 ORTHO05D008009 8.1e-82 307.8 270 57.8
FAN02G2504 Fragaria x ananassa HOM05D006420 ORTHO05D008009 1.1e-81 307.4 233 64.4
Lj5g0015213 Lotus japonicus HOM05D006420 ORTHO05D008009 1.1e-81 307.4 228 65.4
MBI04_g29616_MAGBIO Magnolia biondii HOM05D006420 ORTHO05D008009 1.4e-81 307.0 186 77.4
Medtr1g082950 Medicago truncatula HOM05D006420 ORTHO05D008009 1.4e-81 307.0 227 65.2
FAN05G1000 Fragaria x ananassa HOM05D006420 ORTHO05D008009 4.0e-81 305.4 288 55.2
A03p68650 Brassica napus HOM05D006420 ORTHO05D008009 1.2e-80 303.9 236 61.0
BraSC39t46193Z Brassica rapa HOM05D006420 ORTHO05D008009 1.2e-80 303.9 236 61.0
Thhalv10023646m.g Eutrema salsugineum HOM05D006420 ORTHO05D008009 1.3e-79 300.4 257 57.2
Aa31LG2G11700 Aethionema arabicum HOM05D006774 ORTHO05D008411 2.9e-79 299.3 260 56.9
BcaC06g31763 Brassica carinata HOM05D006420 ORTHO05D008009 4.9e-79 298.5 262 56.1
HanXRQChr16g0524621 Helianthus annuus HOM05D006420 ORTHO05D008009 1.4e-78 297.0 218 67.0
Haze_04190 Corylus avellana HOM05D006420 ORTHO05D008009 9.3e-78 294.3 323 50.2
Potri.013G021600 Populus trichocarpa HOM05D006420 ORTHO05D008009 2.7e-77 292.7 219 66.7
BcaC02g10755 Brassica carinata HOM05D006420 ORTHO05D008009 6.0e-77 291.6 260 55.0
C04p25420 Brassica napus HOM05D006420 ORTHO05D008009 6.0e-77 291.6 260 55.0
BolC4t24060H Brassica oleracea HOM05D006420 ORTHO05D008009 6.0e-77 291.6 260 55.0
CARHR287540 Cardamine hirsuta HOM05D006420 ORTHO05D008009 3.3e-75 285.8 221 63.3
SpUn0004_0090 Schrenkiella parvula HOM05D006420 ORTHO05D008009 9.6e-75 284.3 221 62.4
Carub.0002s0818 Capsella rubella HOM05D006420 ORTHO05D008009 2.4e-73 279.6 220 61.8
Zm00001eb054020 Zea mays HOM05D006420 ORTHO05D008009 3.1e-73 279.3 228 57.9
AL1G65580 Arabidopsis lyrata HOM05D006420 ORTHO05D008009 6.9e-73 278.1 221 61.5
SGA_v2.0_scaffold81G26063 Striga asiatica HOM05D006420 ORTHO05D000105 9.0e-73 277.7 470 38.9
Sabra13G0024000 Salix brachista HOM05D006420 ORTHO05D008009 3.4e-72 275.8 219 62.6
AT1G55000 Arabidopsis thaliana HOM05D006420 ORTHO05D008009 7.6e-72 274.6 220 60.0
MELO3C004253.2 Cucumis melo HOM05D000208 ORTHO05D000130 2.1e-69 266.5 219 63.0
Os03g0699600 Oryza sativa ssp. japonica HOM05D006420 ORTHO05D008009 1.9e-67 260.0 208 57.7
Pp3c16_5370 Physcomitrium patens HOM05D006420 ORTHO05D008009 7.4e-59 231.5 210 56.2
AagrBONN_evm.TU.Sc2ySwM_368.542 Anthoceros agrestis HOM05D006420 ORTHO05D008009 1.8e-52 210.3 214 48.1
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 1.3e-50 204.1 164 61.6
Rhsim07G0185100 Rhododendron simsii HOM05D006420 ORTHO05D008009 1.3e-50 204.1 125 82.4
SMO356G0643 Selaginella moellendorffii HOM05D006420 ORTHO05D008009 1.7e-47 193.7 208 46.2
Potri.005G032100 Populus trichocarpa HOM05D006420 ORTHO05D008009 1.4e-44 184.1 155 58.7
MD10G1167700 Malus domestica HOM05D006420 ORTHO05D008009 1.2e-40 171.0 117 68.4
QL03p007970 Quercus lobata HOM05D006420 ORTHO05D008009 2.5e-38 163.3 115 69.6
QL03p007144 Quercus lobata HOM05D006420 ORTHO05D008009 2.7e-37 159.8 116 69.0
vmacro23281 Vaccinium macrocarpon HOM05D006420 ORTHO05D008009 3.6e-37 159.5 99 75.8
Eucgr.B01949 Eucalyptus grandis HOM05D006420 ORTHO05D008009 1.8e-36 157.1 111 65.8
Eucgr.B01859 Eucalyptus grandis HOM05D006420 ORTHO05D008009 4.4e-35 152.5 107 65.4
Eucgr.B01946 Eucalyptus grandis HOM05D006420 ORTHO05D008009 7.4e-35 151.8 104 67.3
Sabra05G0034600 Salix brachista HOM05D006420 ORTHO05D008009 4.0e-28 129.4 134 50.0
SEGI_28170 Sequoiadendron giganteum HOM05D006420 ORTHO05D008009 5.9e-24 115.5 83 62.7
Cre16.g667100 Chlamydomonas reinhardtii HOM05D006420 ORTHO05D008009 2.5e-22 110.2 231 29.4
vmacro23282 Vaccinium macrocarpon HOM05D006420 ORTHO05D008009 2.4e-17 93.6 104 54.8
QL03p007977 Quercus lobata HOM05D006420 ORTHO05D008009 2.6e-11 73.6 76 46.1
QL03p007137 Quercus lobata HOM05D006420 ORTHO05D008009 9.8e-11 71.6 67 50.7
GSVIVG01012047001 Vitis vinifera HOM05D002624 ORTHO05D002796 1.6e-08 64.3 87 40.2
Thhalv10024156m.g Eutrema salsugineum HOM05D006420 ORTHO05D008009 1.3e-07 61.2 84 39.3

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (3 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (3 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (5 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (3 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (2 genes)
Zea mays (1 genes)

Program Settings