Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034119 Camellia sinensis var. sinensis HOM05D004962 ORTHO05D006249 0.0e+00 1691.0 812 100.0
CSS0022436 Camellia sinensis var. sinensis HOM05D004962 ORTHO05D006249 0.0e+00 1663.3 823 97.6
Dinv16141 Davidia involucrata HOM05D004962 ORTHO05D006249 0.0e+00 1438.3 832 84.5
Rhsim09G0103500 Rhododendron simsii HOM05D004962 ORTHO05D006249 0.0e+00 1399.4 831 81.7
Lj3A879T38 Lonicera japonica HOM05D004962 ORTHO05D006249 0.0e+00 1360.1 830 78.6
QL01p010772 Quercus lobata HOM05D004962 ORTHO05D006249 0.0e+00 1359.4 836 77.5
Sabra10G0090000 Salix brachista HOM05D004962 ORTHO05D006249 0.0e+00 1354.0 826 78.6
Atru.chr11.243 Acer truncatum HOM05D004962 ORTHO05D006249 0.0e+00 1350.5 826 77.8
Potri.010G119600 Populus trichocarpa HOM05D004962 ORTHO05D006249 0.0e+00 1350.5 826 78.3
CiPaw.05G242900 Carya illinoinensis HOM05D004962 ORTHO05D006249 0.0e+00 1350.1 835 77.5
Manes.14G107300 Manihot esculenta HOM05D004962 ORTHO05D006249 0.0e+00 1348.6 829 77.1
Ciclev10014261m.g Citrus clementina HOM05D004962 ORTHO05D006249 0.0e+00 1340.9 833 76.4
Actinidia14925 Actinidia chinensis HOM05D004962 ORTHO05D006249 0.0e+00 1326.2 776 83.0
TWI31G0370 Tripterygium wilfordii HOM05D004962 ORTHO05D006249 0.0e+00 1320.8 831 76.5
Prupe.1G317200 Prunus persica HOM05D004962 ORTHO05D006249 0.0e+00 1318.1 835 76.6
DCAR_007266 Daucus carota HOM05D004962 ORTHO05D006249 0.0e+00 1317.4 819 77.8
Nitab4.5_0002112g0120 Nicotiana tabacum HOM05D004962 ORTHO05D006249 0.0e+00 1317.4 824 76.2
GSVIVG01011835001 Vitis vinifera HOM05D004962 ORTHO05D006249 0.0e+00 1315.8 828 76.3
Nn4g23964 Nelumbo nucifera HOM05D004962 ORTHO05D006249 0.0e+00 1310.0 836 75.4
Haze_00658 Corylus avellana HOM05D004962 ORTHO05D006249 0.0e+00 1309.3 965 67.2
Duzib248G1599 Durio zibethinus HOM05D004962 ORTHO05D006249 0.0e+00 1308.1 834 75.2
MD13G1035000 Malus domestica HOM05D004962 ORTHO05D006249 0.0e+00 1308.1 832 75.6
Thecc.02G221200 Theobroma cacao HOM05D004962 ORTHO05D006249 0.0e+00 1308.1 835 74.9
SalBow8G2488 Salvia bowleyana HOM05D004962 ORTHO05D006249 0.0e+00 1307.4 828 74.2
FvH4_4g26660 Fragaria vesca HOM05D004962 ORTHO05D006249 0.0e+00 1301.2 829 76.0
Peaxi162Scf00179g00544 Petunia axillaris HOM05D004962 ORTHO05D006249 0.0e+00 1301.2 827 75.0
FAN12G3194 Fragaria x ananassa HOM05D004962 ORTHO05D006249 0.0e+00 1299.3 829 75.9
FAN12G0536 Fragaria x ananassa HOM05D004962 ORTHO05D006249 0.0e+00 1298.9 829 75.9
MD16G1036900 Malus domestica HOM05D004962 ORTHO05D006249 0.0e+00 1298.5 833 75.4
Nitab4.5_0000694g0070 Nicotiana tabacum HOM05D004962 ORTHO05D006249 0.0e+00 1298.5 825 75.3
PGSC0003DMG400025502 Solanum tuberosum HOM05D004962 ORTHO05D006249 0.0e+00 1298.5 825 74.9
RcHm_v2.0_Chr4g0434371 Rosa chinensis HOM05D004962 ORTHO05D006249 0.0e+00 1295.8 829 76.1
Hund20741 Selenicereus undatus HOM05D004962 ORTHO05D006249 0.0e+00 1295.4 826 75.2
FAN07G0368 Fragaria x ananassa HOM05D004962 ORTHO05D006249 0.0e+00 1293.5 835 75.3
Solyc06g008310.3 Solanum lycopersicum HOM05D004962 ORTHO05D006249 0.0e+00 1293.5 828 75.0
Gohir.D10G184801 Gossypium hirsutum HOM05D004962 ORTHO05D006249 0.0e+00 1293.1 831 74.6
Sopen06g003160 Solanum pennellii HOM05D004962 ORTHO05D006249 0.0e+00 1292.7 827 74.7
Cc11_g09620 Coffea canephora HOM05D004962 ORTHO05D006249 0.0e+00 1291.2 825 74.9
Gorai.011G207200 Gossypium raimondii HOM05D004962 ORTHO05D006249 0.0e+00 1290.0 831 74.4
FAN22G2325 Fragaria x ananassa HOM05D004962 ORTHO05D006249 0.0e+00 1289.6 829 75.5
Sc04g0005990 Simmondsia chinensis HOM05D004962 ORTHO05D006249 0.0e+00 1289.6 829 74.7
Medtr1g109490 Medicago truncatula HOM05D004962 ORTHO05D006249 0.0e+00 1287.3 832 74.6
FAN17G1054 Fragaria x ananassa HOM05D004962 ORTHO05D006249 0.0e+00 1286.6 835 75.0
Aqoxy3G04030 Aquilegia oxysepala HOM05D004962 ORTHO05D006249 0.0e+00 1285.8 837 74.7
Glyma.20G121000 Glycine max HOM05D004962 ORTHO05D006249 0.0e+00 1285.8 836 74.3
MSTRG.2215 Avicennia marina HOM05D004962 ORTHO05D006249 0.0e+00 1285.4 828 73.7
VMungo0720G3109 Vigna mungo HOM05D004962 ORTHO05D006249 0.0e+00 1284.6 832 74.3
CANSAT01G1665 Cannabis sativa HOM05D004962 ORTHO05D006249 0.0e+00 1281.2 827 75.3
Phvul.007G032400 Phaseolus vulgaris HOM05D004962 ORTHO05D006249 0.0e+00 1280.0 832 73.9
PGR119G1728 Punica granatum HOM05D004962 ORTHO05D006249 0.0e+00 1279.6 832 74.5
Psat6g224120 Pisum sativum HOM05D004962 ORTHO05D006249 0.0e+00 1278.5 828 74.3
Eucgr.G02236 Eucalyptus grandis HOM05D004962 ORTHO05D006249 0.0e+00 1278.1 836 73.6
Glyma.10G270300 Glycine max HOM05D004962 ORTHO05D006249 0.0e+00 1272.7 836 73.6
vmacro10604 Vaccinium macrocarpon HOM05D004962 ORTHO05D006249 0.0e+00 1271.5 732 83.5
Ca_06893_v3 Cicer arietinum L. HOM05D004962 ORTHO05D006249 0.0e+00 1268.8 836 73.6
Lalb_Chr06g0165831 Lupinus albus HOM05D004962 ORTHO05D006249 0.0e+00 1266.9 833 73.1
AUR62014113 Chenopodium quinoa HOM05D004962 ORTHO05D006249 0.0e+00 1263.4 828 73.6
Lj5g0019473 Lotus japonicus HOM05D004962 ORTHO05D006249 0.0e+00 1260.0 835 72.9
MELO3C012277.2 Cucumis melo HOM05D004962 ORTHO05D006249 0.0e+00 1255.0 835 73.2
Migut.E00376 Erythranthe guttata HOM05D004962 ORTHO05D006249 0.0e+00 1252.7 821 72.4
arahy.Tifrunner.gnm1.ann1.HFR8A2 Arachis hypogaea HOM05D004962 ORTHO05D006249 0.0e+00 1251.9 836 72.0
AUR62002806 Chenopodium quinoa HOM05D004962 ORTHO05D006249 0.0e+00 1250.7 832 72.7
arahy.Tifrunner.gnm1.ann1.I79V4W Arachis hypogaea HOM05D004962 ORTHO05D006249 0.0e+00 1248.4 836 72.1
Sed0022508 Sechium edule HOM05D004962 ORTHO05D006249 0.0e+00 1247.6 829 72.3
CsaV3_5G034620 Cucumis sativus L. HOM05D004962 ORTHO05D006249 0.0e+00 1246.5 835 72.6
SGA_v2.0_scaffold170G38808 Striga asiatica HOM05D004962 ORTHO05D006249 0.0e+00 1243.8 834 71.8
MBI09_g25150_MAGBIO Magnolia biondii HOM05D004962 ORTHO05D006249 0.0e+00 1241.5 829 72.1
HanXRQChr08g0213241 Helianthus annuus HOM05D004962 ORTHO05D006249 0.0e+00 1239.9 831 72.3
PSO063G7634 Papaver somniferum HOM05D004962 ORTHO05D006249 0.0e+00 1238.8 848 71.8
QL01p010697 Quercus lobata HOM05D004962 ORTHO05D006249 0.0e+00 1236.1 823 72.9
EL10Ac6g14300 Beta vulgaris HOM05D004962 ORTHO05D006249 0.0e+00 1235.3 851 69.8
ClCG05G022460 Citrullus lanatus HOM05D004962 ORTHO05D006249 0.0e+00 1235.3 871 69.3
ECA233G5272 Erigeron canadensis HOM05D004962 ORTHO05D006249 0.0e+00 1232.2 829 72.6
PSO782G5688 Papaver somniferum HOM05D004962 ORTHO05D006249 0.0e+00 1220.3 855 70.4
Oeu048367.1 Olea europaea HOM05D004962 ORTHO05D006249 0.0e+00 1209.1 928 65.4
Lsat_1_v5_gn_8_42541 Lactuca sativa HOM05D004962 ORTHO05D006249 0.0e+00 1196.0 823 71.0
Thhalv10011237m.g Eutrema salsugineum HOM05D004962 ORTHO05D006249 0.0e+00 1163.7 830 67.5
TPR.G18855 Trifolium pratense HOM05D004962 ORTHO05D006249 0.0e+00 1158.7 761 73.3
AL1G56890 Arabidopsis lyrata HOM05D004962 ORTHO05D006249 0.0e+00 1149.8 831 66.9
C06p04260 Brassica napus HOM05D004962 ORTHO05D006249 0.0e+00 1148.7 828 66.8
Carub.0001s3872 Capsella rubella HOM05D004962 ORTHO05D006249 0.0e+00 1147.9 830 66.6
Sp1g36410 Schrenkiella parvula HOM05D004962 ORTHO05D006249 0.0e+00 1147.9 830 66.9
Aa31LG10G4460 Aethionema arabicum HOM05D004962 ORTHO05D006249 0.0e+00 1147.5 825 66.7
BolC6t35550H Brassica oleracea HOM05D004962 ORTHO05D006249 0.0e+00 1146.0 829 66.7
BraA06t23589Z Brassica rapa HOM05D004962 ORTHO05D006249 0.0e+00 1144.0 827 66.7
BcaB04g17325 Brassica carinata HOM05D004962 ORTHO05D006249 0.0e+00 1143.3 828 66.7
BcaC08g43144 Brassica carinata HOM05D004962 ORTHO05D006249 0.0e+00 1140.9 828 66.4
A06p03820 Brassica napus HOM05D004962 ORTHO05D006249 0.0e+00 1138.3 827 66.5
THA.LOC104811357 Tarenaya hassleriana HOM05D004962 ORTHO05D006249 0.0e+00 1135.9 832 65.6
BcaB07g33669 Brassica carinata HOM05D004962 ORTHO05D006249 0.0e+00 1134.0 827 66.4
CARHR039570 Cardamine hirsuta HOM05D004962 ORTHO05D006249 0.0e+00 1132.5 831 66.5
AT1G49540 Arabidopsis thaliana HOM05D004962 ORTHO05D006249 0.0e+00 1124.8 831 65.8
ATR0759G035 Amborella trichopoda HOM05D004962 ORTHO05D006249 0.0e+00 1117.8 829 65.5
Zm00001eb033820 Zea mays HOM05D004962 ORTHO05D006249 0.0e+00 1105.9 828 64.5
Os08g0493900 Oryza sativa ssp. japonica HOM05D004962 ORTHO05D006249 0.0e+00 1105.5 831 63.2
CDE06G0233 Ceratophyllum demersum HOM05D004962 ORTHO05D006249 0.0e+00 1100.1 816 65.1
Ah.03g138470 Amaranthus hybridus HOM05D004962 ORTHO05D006249 1.1e-299 1033.1 666 74.0
SHI16242 Sapria himalayana HOM05D004962 ORTHO05D006249 1.3e-290 1003.0 826 60.3
Gohir.A10G178200 Gossypium hirsutum HOM05D004962 ORTHO05D006249 3.1e-281 971.8 638 72.6
Cpa.g.sc65.71 Carica papaya HOM05D004962 ORTHO05D006249 1.8e-273 946.0 818 59.0
TAR371G0254 Trochodendron aralioides HOM05D004962 ORTHO05D006249 9.5e-270 933.7 571 78.8
Mapoly0064s0032 Marchantia polymorpha HOM05D004962 ORTHO05D006249 2.7e-248 862.4 891 50.8
Pp3c16_8750 Physcomitrium patens HOM05D004962 ORTHO05D005286 1.0e-239 833.9 857 49.7
SMO364G0112 Selaginella moellendorffii HOM05D004962 ORTHO05D006249 4.0e-236 822.0 850 51.3
unitig_699.g19525 Utricularia gibba HOM05D004962 ORTHO05D006249 3.2e-233 812.4 808 52.5
COL.COLO4_32126 Corchorus olitorius HOM05D004962 ORTHO05D006249 1.0e-178 631.3 402 72.9
COL.COLO4_32127 Corchorus olitorius HOM05D004962 ORTHO05D006249 7.2e-177 625.2 447 68.5
HPP92_023439 Vanilla planifolia HOM05D004962 ORTHO05D006249 4.3e-153 546.2 401 67.6
Aa31LG10G4060 Aethionema arabicum HOM05D004962 ORTHO05D006249 1.3e-133 481.5 359 64.3
HPP92_023440 Vanilla planifolia HOM05D004962 ORTHO05D006249 1.3e-130 471.5 350 62.3
Actinidia16688 Actinidia chinensis HOM05D004962 ORTHO05D006249 1.6e-128 464.5 264 83.0
TAR371G0924 Trochodendron aralioides HOM05D004962 ORTHO05D006249 3.4e-110 403.7 230 81.7
Sed0004719 Sechium edule HOM05D004962 ORTHO05D006249 1.2e-107 395.2 811 34.9
MD07G1142000 Malus domestica HOM05D004962 ORTHO05D006249 3.1e-103 380.6 298 67.8
ClCG04G012840 Citrullus lanatus HOM05D004962 ORTHO05D001482 7.6e-102 375.9 472 46.4
Cfa023883 Carpinus fangiana HOM05D004962 ORTHO05D006249 3.9e-98 363.6 867 31.5
Dinv31590 Davidia involucrata HOM05D004962 ORTHO05D006249 1.9e-97 361.3 193 86.0
SEGI_20231 Sequoiadendron giganteum HOM05D004962 ORTHO05D006249 1.3e-96 358.6 304 57.2
Dinv31591 Davidia involucrata HOM05D004962 ORTHO05D006249 5.5e-92 343.2 239 72.8
Cre10.g462750 Chlamydomonas reinhardtii HOM05D004962 ORTHO05D006249 7.1e-92 342.8 1177 26.3
SEGI_12856 Sequoiadendron giganteum HOM05D004962 ORTHO05D006249 3.4e-86 323.9 250 62.8
MCO16G399 Micromonas commoda HOM05D004962 ORTHO05D006249 8.7e-82 309.3 853 29.3
TAR371G1111 Trochodendron aralioides HOM05D004962 ORTHO05D006249 1.5e-81 308.5 195 74.4
MD07G1141900 Malus domestica HOM05D004962 ORTHO05D006249 2.0e-78 298.1 192 74.5
BcaC07g37033 Brassica carinata HOM05D004962 ORTHO05D006249 1.5e-70 271.9 549 35.0
C08p04030 Brassica napus HOM05D004962 ORTHO05D006249 7.2e-52 209.9 193 52.8
A08p03840 Brassica napus HOM05D004962 ORTHO05D006249 1.0e-50 206.1 551 29.9
BraA08t32413Z Brassica rapa HOM05D004962 ORTHO05D006249 1.0e-50 206.1 551 29.9
SEGI_09159 Sequoiadendron giganteum HOM05D004962 ORTHO05D006249 1.0e-45 189.5 154 61.7
TAR371G0141 Trochodendron aralioides HOM05D004962 ORTHO05D006249 9.8e-41 172.9 102 76.5
vmacro10603 Vaccinium macrocarpon HOM05D004962 ORTHO05D006249 1.3e-40 172.6 109 78.0
PGSC0003DMG400024407 Solanum tuberosum HOM05D004962 ORTHO05D006249 6.3e-40 170.2 99 79.8
PGSC0003DMG400031444 Solanum tuberosum HOM05D004962 ORTHO05D006249 6.4e-32 143.7 78 84.6
Dinv31589 Davidia involucrata HOM05D004962 ORTHO05D006249 2.3e-29 135.2 96 68.8
TAR371G0959 Trochodendron aralioides HOM05D004962 ORTHO05D006249 6.6e-29 133.7 70 88.6
CBR_g37253 Chara braunii HOM05D004962 ORTHO05D000048 2.3e-26 125.2 209 38.8
TPR.G18842 Trifolium pratense HOM05D004962 ORTHO05D006249 2.0e-25 122.1 69 79.7
C08p04020 Brassica napus HOM05D004962 ORTHO05D006249 3.2e-23 114.8 69 76.8
Actinidia16687 Actinidia chinensis HOM05D004962 ORTHO05D006249 7.8e-22 110.2 53 84.9
TAR371G1015 Trochodendron aralioides HOM05D004962 ORTHO05D006249 1.3e-21 109.4 64 76.6
BcaB02g11086 Brassica carinata HOM05D004962 ORTHO05D006249 3.0e-21 108.2 93 54.8
SEGI_19116 Sequoiadendron giganteum HOM05D004962 ORTHO05D006249 1.1e-20 106.3 65 66.2
A05p20570 Brassica napus HOM05D004962 ORTHO05D040710 4.3e-20 104.4 114 52.6
BolC8t47195H Brassica oleracea HOM05D004962 ORTHO05D006249 4.3e-20 104.4 131 44.3
BraA05t20967Z Brassica rapa HOM05D004962 ORTHO05D040710 3.4e-17 94.7 113 48.7
BolC8t47194H Brassica oleracea HOM05D004962 ORTHO05D006249 9.9e-17 93.2 139 39.6
Psat5g186320 Pisum sativum HOM05D000280 ORTHO05D004446 1.8e-10 72.4 44 63.6
RcHm_v2.0_Chr7g0200531 Rosa chinensis HOM05D004962 ORTHO05D006249 1.3e-08 66.2 86 45.3
ECA247G3798 Erigeron canadensis HOM05D000464 ORTHO05D006292 4.1e-07 61.2 146 30.1
SEGI_06199 Sequoiadendron giganteum HOM05D005323 ORTHO05D006820 7.1e-07 60.5 120 30.8
DCAR_026196 Daucus carota HOM05D000464 ORTHO05D006292 1.2e-06 59.7 148 29.7
Rhsim12G0170400 Rhododendron simsii HOM05D000464 ORTHO05D006292 1.2e-06 59.7 176 27.8
SHI17349 Sapria himalayana HOM05D000464 ORTHO05D006292 1.2e-06 59.7 147 27.9
Mapoly0049s0059 Marchantia polymorpha HOM05D005323 ORTHO05D006820 3.5e-06 58.2 120 29.2
SHI06205 Sapria himalayana HOM05D005323 ORTHO05D000023 4.6e-06 57.8 133 27.1
DCAR_007461 Daucus carota HOM05D000464 ORTHO05D006292 6.0e-06 57.4 146 27.4

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (2 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (5 genes)
Brassica napus (6 genes)
Brassica oleracea (3 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (2 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (3 genes)
Davidia involucrata (4 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (4 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (2 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (3 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (5 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (3 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (6 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings