Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034104 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 3.7e-54 214.5 103 100.0
CSS0029214 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.1e-53 213.0 103 99.0
Actinidia14945 Actinidia chinensis HOM05D004972 ORTHO05D006309 9.2e-45 183.3 100 88.0
Actinidia15243 Actinidia chinensis HOM05D004972 ORTHO05D006309 1.2e-44 183.0 100 86.0
Actinidia36689 Actinidia chinensis HOM05D004972 ORTHO05D006309 1.2e-44 183.0 100 86.0
CSS0013445 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 2.0e-44 182.2 103 83.5
CSS0024462 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 2.0e-44 182.2 103 83.5
Dinv05881 Davidia involucrata HOM05D004972 ORTHO05D006309 4.6e-44 181.0 99 84.8
vmacro01431 Vaccinium macrocarpon HOM05D004972 ORTHO05D006309 4.6e-44 181.0 103 86.4
Rhsim09G0068400 Rhododendron simsii HOM05D004972 ORTHO05D006309 6.6e-43 177.2 102 83.3
TAR629G1532 Trochodendron aralioides HOM05D004972 ORTHO05D006309 2.5e-42 175.3 100 82.0
COL.COLO4_10156 Corchorus olitorius HOM05D004972 ORTHO05D006309 5.6e-42 174.1 100 80.0
Nn6g34668 Nelumbo nucifera HOM05D004972 ORTHO05D006309 5.6e-42 174.1 100 81.0
Hma1.2p1_0114F.1_g055290 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 9.5e-42 173.3 100 83.0
GSVIVG01011786001 Vitis vinifera HOM05D004972 ORTHO05D006309 1.2e-41 172.9 100 81.0
Gohir.D12G057200 Gossypium hirsutum HOM05D004972 ORTHO05D006309 3.6e-41 171.4 100 79.0
Gorai.001G201700 Gossypium raimondii HOM05D004972 ORTHO05D006309 4.7e-41 171.0 100 78.0
Manes.06G062200 Manihot esculenta HOM05D004972 ORTHO05D006309 8.0e-41 170.2 100 77.0
Dinv16188 Davidia involucrata HOM05D004972 ORTHO05D006309 1.1e-40 169.9 100 81.0
Gohir.A07G173000 Gossypium hirsutum HOM05D004972 ORTHO05D006309 1.1e-40 169.9 100 77.0
Gohir.D07G180500 Gossypium hirsutum HOM05D004972 ORTHO05D006309 1.1e-40 169.9 100 77.0
Ciclev10016597m.g Citrus clementina HOM05D004972 ORTHO05D006309 1.8e-40 169.1 100 80.0
Nitab4.5_0004692g0050 Nicotiana tabacum HOM05D004972 ORTHO05D006309 1.8e-40 169.1 98 78.6
Migut.L00755 Erythranthe guttata HOM05D004972 ORTHO05D006309 4.0e-40 167.9 100 78.0
FAN17G1326 Fragaria x ananassa HOM05D004972 ORTHO05D006309 4.0e-40 167.9 105 77.1
Potri.010G115800 Populus trichocarpa HOM05D004972 ORTHO05D006309 4.0e-40 167.9 100 78.0
Haze_11044 Corylus avellana HOM05D004972 ORTHO05D006309 5.2e-40 167.5 100 80.0
Lj6C749G10 Lonicera japonica HOM05D004972 ORTHO05D006309 6.8e-40 167.2 99 80.8
Gohir.A12G057400 Gossypium hirsutum HOM05D004972 ORTHO05D006309 8.9e-40 166.8 100 77.0
Thecc.04G114900 Theobroma cacao HOM05D004972 ORTHO05D006309 1.5e-39 166.0 100 77.0
MD16G1031300 Malus domestica HOM05D004972 ORTHO05D006309 2.0e-39 165.6 100 77.0
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 2.6e-39 165.2 99 76.8
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 2.6e-39 165.2 99 76.8
DCAR_030202 Daucus carota HOM05D004972 ORTHO05D006309 4.4e-39 164.5 101 76.2
FvH4_4g26160 Fragaria vesca HOM05D004972 ORTHO05D006309 4.4e-39 164.5 105 76.2
QL01p002347 Quercus lobata HOM05D004972 ORTHO05D006309 4.4e-39 164.5 98 79.6
Cfa008573 Carpinus fangiana HOM05D004972 ORTHO05D006309 7.5e-39 163.7 100 79.0
Nn2g14330 Nelumbo nucifera HOM05D004972 ORTHO05D006309 7.5e-39 163.7 100 76.0
Peaxi162Scf00205g00614 Petunia axillaris HOM05D004972 ORTHO05D006309 7.5e-39 163.7 100 75.0
FAN07G2072 Fragaria x ananassa HOM05D004972 ORTHO05D006309 9.8e-39 163.3 105 76.2
FAN12G1431 Fragaria x ananassa HOM05D004972 ORTHO05D006309 9.8e-39 163.3 105 76.2
FAN12G3562 Fragaria x ananassa HOM05D004972 ORTHO05D006309 9.8e-39 163.3 105 76.2
Prupe.1G321700 Prunus persica HOM05D004972 ORTHO05D006309 1.3e-38 162.9 100 79.0
CiPaw.05G247000 Carya illinoinensis HOM05D004972 ORTHO05D006309 1.7e-38 162.5 100 76.0
HanXRQChr07g0189871 Helianthus annuus HOM05D004972 ORTHO05D006309 1.7e-38 162.5 100 73.0
MD13G1028600 Malus domestica HOM05D004972 ORTHO05D006309 1.7e-38 162.5 100 76.0
Sopen05g004230 Solanum pennellii HOM05D004972 ORTHO05D006309 1.7e-38 162.5 100 74.0
PGSC0003DMG400030511 Solanum tuberosum HOM05D004972 ORTHO05D006309 2.2e-38 162.2 100 74.0
Lsat_1_v5_gn_8_42761 Lactuca sativa HOM05D004972 ORTHO05D006309 2.9e-38 161.8 100 74.0
Solyc05g008400.4 Solanum lycopersicum HOM05D004972 ORTHO05D006309 2.9e-38 161.8 100 73.0
AUR62014195 Chenopodium quinoa HOM05D004972 ORTHO05D006309 4.9e-38 161.0 100 76.0
AUR62041239 Chenopodium quinoa HOM05D004972 ORTHO05D006309 4.9e-38 161.0 100 76.0
RcHm_v2.0_Chr4g0433731 Rosa chinensis HOM05D004972 ORTHO05D006309 4.9e-38 161.0 105 74.3
CANSAT01G2336 Cannabis sativa HOM05D004972 ORTHO05D006309 6.4e-38 160.6 100 77.0
Cc11_g09090 Coffea canephora HOM05D004972 ORTHO05D006309 6.4e-38 160.6 100 77.0
HanXRQChr08g0212881 Helianthus annuus HOM05D004972 ORTHO05D006309 1.1e-37 159.8 100 71.0
Aqoxy3G04360 Aquilegia oxysepala HOM05D004972 ORTHO05D006309 1.9e-37 159.1 100 74.0
CsaV3_5G034860 Cucumis sativus L. HOM05D004972 ORTHO05D006309 2.4e-37 158.7 100 75.0
Hund24992 Selenicereus undatus HOM05D004972 ORTHO05D006309 2.4e-37 158.7 101 76.2
Atru.chr11.981 Acer truncatum HOM05D004972 ORTHO05D006309 3.2e-37 158.3 100 73.0
CAN.G1693.8 Capsicum annuum HOM05D004972 ORTHO05D006309 3.2e-37 158.3 100 73.0
Sed0026570 Sechium edule HOM05D004972 ORTHO05D006309 3.2e-37 158.3 100 75.0
Nitab4.5_0004092g0040 Nicotiana tabacum HOM05D004972 ORTHO05D006309 4.1e-37 157.9 123 64.2
TWI79G0317 Tripterygium wilfordii HOM05D004972 ORTHO05D006309 4.1e-37 157.9 100 80.0
SGA_v2.0_scaffold50G18531 Striga asiatica HOM05D004972 ORTHO05D006309 9.2e-37 156.8 100 72.0
CiPaw.06G013900 Carya illinoinensis HOM05D004972 ORTHO05D006309 1.6e-36 156.0 102 76.5
FAN22G0152 Fragaria x ananassa HOM05D004972 ORTHO05D006309 1.6e-36 156.0 105 73.3
ECA233G6099 Erigeron canadensis HOM05D004972 ORTHO05D006309 2.1e-36 155.6 100 74.0
Sc04g0005680 Simmondsia chinensis HOM05D004972 ORTHO05D006309 2.1e-36 155.6 101 74.3
MSTRG.882 Avicennia marina HOM05D004972 ORTHO05D006309 2.7e-36 155.2 100 72.0
FAN17G1863 Fragaria x ananassa HOM05D004972 ORTHO05D006309 3.5e-36 154.8 98 76.5
Eucgr.G02212 Eucalyptus grandis HOM05D004972 ORTHO05D006309 1.3e-35 152.9 100 74.0
THA.LOC104825471 Tarenaya hassleriana HOM05D004972 ORTHO05D006309 1.7e-35 152.5 100 70.0
Oeu044327.1 Olea europaea HOM05D004972 ORTHO05D006309 3.0e-35 151.8 100 76.0
EL10Ac6g14241 Beta vulgaris HOM05D004972 ORTHO05D006309 3.9e-35 151.4 100 71.0
SalBow8G2598 Salvia bowleyana HOM05D004972 ORTHO05D006309 5.1e-35 151.0 101 72.3
arahy.Tifrunner.gnm1.ann1.YXX0BK Arachis hypogaea HOM05D004972 ORTHO05D006309 2.5e-34 148.7 100 69.0
arahy.Tifrunner.gnm1.ann1.F2FLG1 Arachis hypogaea HOM05D004972 ORTHO05D006309 5.6e-34 147.5 100 70.0
MBI07_g18719_MAGBIO Magnolia biondii HOM05D004972 ORTHO05D006309 5.6e-34 147.5 103 68.0
arahy.Tifrunner.gnm1.ann1.DS7XTJ Arachis hypogaea HOM05D004972 ORTHO05D006309 7.3e-34 147.1 100 69.0
arahy.Tifrunner.gnm1.ann1.UKIC3J Arachis hypogaea HOM05D004972 ORTHO05D006309 7.3e-34 147.1 100 68.0
Phvul.007G035700 Phaseolus vulgaris HOM05D004972 ORTHO05D006309 7.3e-34 147.1 100 68.0
VMungo0720G3073 Vigna mungo HOM05D004972 ORTHO05D006309 1.2e-33 146.4 100 68.0
PSO063G1195 Papaver somniferum HOM05D004972 ORTHO05D006309 2.1e-33 145.6 104 68.3
PSO782G3547 Papaver somniferum HOM05D004972 ORTHO05D006309 2.1e-33 145.6 104 67.3
AT5G13240 Arabidopsis thaliana HOM05D004972 ORTHO05D006309 4.7e-33 144.4 100 69.0
Carub.0006s1141 Capsella rubella HOM05D004972 ORTHO05D006309 8.1e-33 143.7 100 68.0
Lalb_Chr06g0165661 Lupinus albus HOM05D004972 ORTHO05D006309 8.1e-33 143.7 100 67.0
SGA_v2.0_scaffold38G15047 Striga asiatica HOM05D004972 ORTHO05D006309 1.8e-32 142.5 99 65.7
Aa31LG3G14420 Aethionema arabicum HOM05D004972 ORTHO05D006309 3.1e-32 141.7 100 66.0
AL6G23850 Arabidopsis lyrata HOM05D004972 ORTHO05D006309 5.2e-32 141.0 100 67.0
Thhalv10014602m.g Eutrema salsugineum HOM05D004972 ORTHO05D006309 6.8e-32 140.6 100 67.0
Medtr1g108610 Medicago truncatula HOM05D004972 ORTHO05D006309 8.9e-32 140.2 100 65.0
Ca_11105_v3 Cicer arietinum L. HOM05D004972 ORTHO05D006309 1.2e-31 139.8 100 66.0
Sp6g30750 Schrenkiella parvula HOM05D004972 ORTHO05D006309 1.5e-31 139.4 100 66.0
Glyma.20G124600 Glycine max HOM05D004972 ORTHO05D006309 3.4e-31 138.3 101 65.3
Lj5g0002039 Lotus japonicus HOM05D004972 ORTHO05D006309 4.4e-31 137.9 100 64.0
Psat6g222200 Pisum sativum HOM05D004972 ORTHO05D006309 5.8e-31 137.5 100 65.0
TPR.G4886 Trifolium pratense HOM05D004972 ORTHO05D006309 1.3e-30 136.3 100 64.0
Glyma.10G266000 Glycine max HOM05D004972 ORTHO05D006309 1.7e-30 136.0 100 64.0
Ah.02g128040 Amaranthus hybridus HOM05D004972 ORTHO05D006309 2.9e-30 135.2 109 64.2
CARHR200210 Cardamine hirsuta HOM05D004972 ORTHO05D006309 3.7e-30 134.8 102 64.7
BcaC04g19133 Brassica carinata HOM05D004972 ORTHO05D006309 4.9e-30 134.4 100 63.0
A10p24970 Brassica napus HOM05D004972 ORTHO05D006309 4.9e-30 134.4 100 63.0
BolC9t59224H Brassica oleracea HOM05D004972 ORTHO05D006309 4.9e-30 134.4 100 63.0
BraA10t44559Z Brassica rapa HOM05D004972 ORTHO05D006309 4.9e-30 134.4 100 63.0
Hma1.2p1_1593F.1_g292560 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 8.3e-30 133.7 72 84.7
C09p63840 Brassica napus HOM05D004972 ORTHO05D006309 1.1e-29 133.3 100 62.0
Duzib133G0650 Durio zibethinus HOM05D004972 ORTHO05D006309 2.7e-28 128.6 72 81.9
Zm00001eb246210 Zea mays HOM05D004972 ORTHO05D006309 3.5e-28 128.3 100 58.0
unitig_0.g2334 Utricularia gibba HOM05D004972 ORTHO05D006309 3.0e-27 125.2 100 59.0
Cpa.g.sc65.108 Carica papaya HOM05D004972 ORTHO05D006309 5.1e-27 124.4 72 77.8
BcaNung01872 Brassica carinata HOM05D004972 ORTHO05D006309 6.6e-27 124.0 97 61.9
Os04g0662900 Oryza sativa ssp. japonica HOM05D004972 ORTHO05D006309 1.1e-26 123.2 100 54.0
CDE09G0103 Ceratophyllum demersum HOM05D004972 ORTHO05D006309 9.5e-26 120.2 102 59.8
SEGI_23519 Sequoiadendron giganteum HOM05D004972 ORTHO05D006309 2.1e-25 119.0 101 54.5
ATR0315G127 Amborella trichopoda HOM05D004972 ORTHO05D006309 8.1e-25 117.1 102 57.8
Duzib138G1958 Durio zibethinus HOM05D004972 ORTHO05D006309 2.9e-22 108.6 67 77.6
HPP92_015449 Vanilla planifolia HOM05D004972 ORTHO05D006309 3.8e-22 108.2 102 52.0
Zm00001eb219440 Zea mays HOM05D009386 ORTHO05D011419 1.9e-21 105.9 65 70.8
Gorai.001G193400 Gossypium raimondii HOM05D004972 ORTHO05D029864 1.6e-20 102.8 100 56.0
ClCG05G022260 Citrullus lanatus HOM05D004972 ORTHO05D006309 7.8e-20 100.5 100 53.0
Pp3c11_22300 Physcomitrium patens HOM05D004972 ORTHO05D006309 2.3e-19 99.0 100 44.0
Gorai.010G145600 Gossypium raimondii HOM05D004972 ORTHO05D029864 6.6e-19 97.4 79 63.3
Zm00001eb025950 Zea mays HOM05D004972 ORTHO05D006309 4.3e-18 94.7 81 60.5
Mapoly0012s0169 Marchantia polymorpha HOM05D004972 ORTHO05D006309 2.8e-17 92.0 100 44.0
PGR119G0027 Punica granatum HOM05D004972 ORTHO05D006309 6.9e-16 87.4 100 49.0
AagrBONN_evm.TU.Sc2ySwM_344.4231 Anthoceros agrestis HOM05D004972 ORTHO05D006309 9.0e-16 87.0 100 40.0
MELO3C012297.2 Cucumis melo HOM05D004972 ORTHO05D006309 1.3e-14 83.2 52 71.2
Gorai.008G060200 Gossypium raimondii HOM05D004972 ORTHO05D006309 1.7e-14 82.8 103 43.7
Migut.L00658 Erythranthe guttata HOM05D004972 ORTHO05D006309 2.9e-14 82.0 52 75.0
SHI16322 Sapria himalayana HOM05D004972 ORTHO05D006309 3.2e-13 78.6 99 46.5
PRCOL_00004209 Prasinoderma coloniale HOM05D004972 ORTHO05D006309 5.4e-13 77.8 101 42.6
Gorai.001G223500 Gossypium raimondii HOM05D004972 ORTHO05D029864 2.1e-12 75.9 51 70.6
Cre08.g364250 Chlamydomonas reinhardtii HOM05D004972 ORTHO05D006309 7.8e-12 73.9 69 43.5
Gohir.D01G091150 Gossypium hirsutum HOM05D004972 ORTHO05D029864 1.3e-11 73.2 47 74.5
BolC2t06543H Brassica oleracea HOM05D004972 ORTHO05D006309 2.3e-11 72.4 91 46.2
MCO09G688 Micromonas commoda HOM05D004972 ORTHO05D006309 3.6e-09 65.1 65 40.0

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (6 genes)
Glycine max (2 genes)
Gossypium hirsutum (5 genes)
Gossypium raimondii (5 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (3 genes)

Program Settings