Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 4.7e-241 837.4 417 100.0
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 5.5e-181 637.9 415 77.1
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 6.7e-179 630.9 413 78.0
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 2.1e-172 609.4 412 74.8
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 4.8e-169 598.2 417 76.0
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 2.4e-168 595.9 416 75.0
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 2.4e-168 595.9 416 74.5
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 1.5e-165 586.6 393 74.0
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 9.5e-165 583.9 424 72.2
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 1.6e-164 583.2 418 70.1
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 8.0e-164 580.9 413 72.9
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 8.8e-163 577.4 411 69.3
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 9.8e-162 573.9 413 70.5
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 1.7e-161 573.2 416 71.4
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 2.2e-161 572.8 414 70.0
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 2.8e-161 572.4 414 70.8
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 1.4e-160 570.1 394 73.9
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 3.1e-160 568.9 414 70.3
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 3.5e-159 565.5 411 71.5
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 3.5e-159 565.5 411 71.5
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 1.0e-158 563.9 378 73.0
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 1.3e-158 563.5 408 71.1
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 2.3e-158 562.8 309 88.3
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 2.3e-158 562.8 383 71.8
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 6.6e-158 561.2 415 68.2
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 1.9e-157 559.7 415 69.9
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 3.3e-157 558.9 411 70.3
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 4.3e-157 558.5 345 78.3
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 5.6e-157 558.1 380 73.7
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 7.3e-157 557.8 416 68.3
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 1.2e-156 557.0 415 67.2
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 1.6e-156 556.6 409 68.7
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 2.1e-156 556.2 413 69.0
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 2.1e-156 556.2 419 67.8
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 2.8e-156 555.8 416 68.0
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 3.6e-156 555.4 385 71.9
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 3.6e-156 555.4 359 75.8
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 4.7e-156 555.1 415 67.0
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 8.0e-156 554.3 423 68.1
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 1.0e-155 553.9 420 68.8
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 5.2e-155 551.6 396 71.2
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 6.8e-155 551.2 346 76.0
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 1.5e-154 550.1 394 70.6
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 2.6e-154 549.3 415 67.5
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 2.6e-154 549.3 380 70.8
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 2.6e-154 549.3 413 66.1
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 4.4e-154 548.5 397 71.0
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 7.5e-154 547.7 413 67.8
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 6.4e-153 544.7 413 66.8
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 6.4e-153 544.7 413 67.8
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 8.3e-153 544.3 413 66.8
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 1.1e-152 543.9 394 70.1
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 3.2e-152 542.3 415 67.2
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 4.1e-152 542.0 386 69.9
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 1.6e-151 540.0 415 68.7
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 2.7e-151 539.3 413 67.8
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 3.5e-151 538.9 340 76.5
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 7.8e-151 537.7 432 65.0
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 1.0e-150 537.3 399 67.9
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 3.0e-150 535.8 413 68.3
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 3.0e-150 535.8 379 71.5
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 5.0e-150 535.0 413 65.6
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 5.0e-150 535.0 358 72.6
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 1.2e-148 530.4 317 78.9
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 2.1e-148 529.6 416 63.2
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 3.6e-148 528.9 392 68.1
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 4.7e-148 528.5 392 67.9
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 8.0e-148 527.7 398 68.3
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 2.6e-146 522.7 430 63.5
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 5.8e-146 521.5 318 78.6
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 9.8e-146 520.8 347 72.9
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 1.7e-145 520.0 397 66.0
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 4.9e-145 518.5 411 64.5
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 4.9e-145 518.5 411 64.5
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 8.3e-145 517.7 407 64.6
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 1.1e-144 517.3 382 67.5
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 4.1e-144 515.4 412 63.1
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 1.6e-143 513.5 361 69.3
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 3.5e-143 512.3 346 71.1
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 7.8e-143 511.1 413 63.9
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 3.0e-142 509.2 387 66.1
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 3.9e-142 508.8 355 69.9
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 8.6e-142 507.7 376 67.6
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 8.6e-142 507.7 376 67.6
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 1.1e-141 507.3 443 60.9
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 5.6e-141 505.0 318 75.5
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 9.5e-141 504.2 359 68.8
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 4.7e-140 501.9 379 67.8
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 5.6e-133 478.4 318 77.7
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 7.3e-133 478.0 359 64.9
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 9.5e-133 477.6 322 73.9
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 4.0e-131 472.2 345 67.5
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 4.4e-130 468.8 295 77.3
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 1.1e-128 464.2 397 62.2
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 3.2e-128 462.6 386 61.9
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 3.8e-121 439.1 366 60.9
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 1.3e-118 430.6 247 82.2
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 6.0e-111 405.2 255 74.9
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 1.8e-110 403.7 247 78.1
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 3.9e-110 402.5 359 63.0
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 8.1e-108 394.8 346 55.8
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 8.7e-102 374.8 302 66.2
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 1.1e-101 374.4 325 62.2
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 8.4e-97 358.2 383 53.3
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 9.3e-96 354.8 208 82.7
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 1.1e-88 331.3 363 45.2
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 2.8e-84 316.6 335 46.6
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 3.9e-70 269.6 380 38.2
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 3.1e-67 260.0 184 66.8
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 1.3e-44 184.9 126 67.5
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 5.9e-42 176.0 229 43.2
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.0e-41 175.3 159 56.6
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 6.6e-41 172.6 149 58.4
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 4.0e-38 163.3 91 83.5
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 3.4e-37 160.2 100 76.0
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.5e-29 134.8 112 62.5
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 8.1e-23 112.5 88 60.2
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 2.5e-16 90.9 53 73.6
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 4.7e-15 86.7 93 51.6
Haze_14448 Corylus avellana HOM05D006813 ORTHO05D008657 1.7e-09 68.2 110 46.4

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (3 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (2 genes)
Malus domestica (3 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (3 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (3 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings