Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034044 Camellia sinensis var. sinensis HOM05D005269 ORTHO05D006429 2.3e-63 245.4 119 100.0
Actinidia33802 Actinidia chinensis HOM05D005269 ORTHO05D006429 1.5e-43 179.5 126 73.8
vmacro22190 Vaccinium macrocarpon HOM05D005269 ORTHO05D006429 2.2e-42 175.6 120 75.8
Rhsim09G0214100 Rhododendron simsii HOM05D005269 ORTHO05D006429 1.1e-41 173.3 143 66.4
Dinv17239 Davidia involucrata HOM05D005269 ORTHO05D006429 1.1e-38 163.3 134 67.9
Hma1.2p1_0419F.1_g149570 Hydrangea macrophylla HOM05D005269 ORTHO05D006429 7.6e-35 150.6 134 62.7
Cc11_g00500 Coffea canephora HOM05D005269 ORTHO05D006429 2.1e-32 142.5 122 61.5
Sopen09g034380 Solanum pennellii HOM05D005269 ORTHO05D006429 1.0e-31 140.2 116 61.2
Solyc09g091450.3 Solanum lycopersicum HOM05D005269 ORTHO05D006429 2.3e-31 139.0 116 60.3
PGSC0003DMG400029616 Solanum tuberosum HOM05D005269 ORTHO05D006429 3.9e-31 138.3 116 60.3
MSTRG.4345 Avicennia marina HOM05D005269 ORTHO05D006429 5.1e-31 137.9 118 60.2
THA.LOC104820303 Tarenaya hassleriana HOM05D005269 ORTHO05D006429 3.3e-30 135.2 121 56.2
TAR629G0465 Trochodendron aralioides HOM05D005269 ORTHO05D006429 3.3e-30 135.2 124 59.7
Lj7A504G56 Lonicera japonica HOM05D005269 ORTHO05D006429 9.6e-30 133.7 122 58.2
CiPaw.05G211300 Carya illinoinensis HOM05D005269 ORTHO05D006429 1.3e-29 133.3 120 56.7
Sp1g08440 Schrenkiella parvula HOM05D005269 ORTHO05D006429 1.3e-29 133.3 120 57.5
Peaxi162Scf00047g01229 Petunia axillaris HOM05D005269 ORTHO05D006429 1.6e-29 132.9 125 60.0
Ciclev10033086m.g Citrus clementina HOM05D005269 ORTHO05D006429 2.1e-29 132.5 123 52.8
CAN.G500.91 Capsicum annuum HOM05D005269 ORTHO05D006429 6.2e-29 131.0 115 57.4
Aa31LG1G5120 Aethionema arabicum HOM05D005269 ORTHO05D006429 8.2e-29 130.6 120 55.0
PGR004G2648 Punica granatum HOM05D005269 ORTHO05D006429 4.1e-28 128.3 118 55.9
BcaC05g24843 Brassica carinata HOM05D005269 ORTHO05D006429 5.3e-28 127.9 120 55.0
BolC5t29544H Brassica oleracea HOM05D005269 ORTHO05D006429 5.3e-28 127.9 120 55.0
Prupe.2G330200 Prunus persica HOM05D005269 ORTHO05D006429 5.3e-28 127.9 127 58.3
GSVIVG01024265001 Vitis vinifera HOM05D005269 ORTHO05D006429 6.9e-28 127.5 118 54.2
Cpa.g.sc43.150 Carica papaya HOM05D005269 ORTHO05D006429 9.0e-28 127.1 122 53.3
Thhalv10009118m.g Eutrema salsugineum HOM05D005269 ORTHO05D006429 1.2e-27 126.7 120 54.2
TAR374G1160 Trochodendron aralioides HOM05D005269 ORTHO05D006429 1.2e-27 126.7 122 56.6
AL1G20410 Arabidopsis lyrata HOM05D005269 ORTHO05D006429 1.5e-27 126.3 120 52.5
CANSAT78G2182 Cannabis sativa HOM05D005269 ORTHO05D006429 1.5e-27 126.3 110 55.5
Haze_00354 Corylus avellana HOM05D005269 ORTHO05D006429 1.5e-27 126.3 127 53.5
A06p06530 Brassica napus HOM05D005269 ORTHO05D006429 2.0e-27 125.9 120 54.2
Oeu034712.1 Olea europaea HOM05D005269 ORTHO05D006429 2.0e-27 125.9 132 54.5
PGSC0003DMG400019109 Solanum tuberosum HOM05D005269 ORTHO05D006429 2.0e-27 125.9 130 54.6
BraA06t23864Z Brassica rapa HOM05D005269 ORTHO05D006429 2.6e-27 125.6 120 54.2
MELO3C005384.2 Cucumis melo HOM05D005269 ORTHO05D006429 2.6e-27 125.6 128 55.5
EL10Ac4g10063 Beta vulgaris HOM05D005269 ORTHO05D006429 3.4e-27 125.2 122 53.3
CARHR009820 Cardamine hirsuta HOM05D005269 ORTHO05D006429 3.4e-27 125.2 121 53.7
DCAR_009029 Daucus carota HOM05D005269 ORTHO05D006429 5.8e-27 124.4 123 54.5
Sabra19G0053500 Salix brachista HOM05D005269 ORTHO05D006429 5.8e-27 124.4 119 52.9
AT1G09815 Arabidopsis thaliana HOM05D005269 ORTHO05D006429 7.6e-27 124.0 120 50.8
MD07G1311000 Malus domestica HOM05D005269 ORTHO05D006429 7.6e-27 124.0 133 54.1
Peaxi162Scf00536g00089 Petunia axillaris HOM05D005269 ORTHO05D006429 7.6e-27 124.0 116 55.2
Atru.chr12.1824 Acer truncatum HOM05D005269 ORTHO05D006429 1.3e-26 123.2 119 52.1
Eucgr.I00374 Eucalyptus grandis HOM05D005269 ORTHO05D006429 1.3e-26 123.2 117 53.0
Potri.019G042900 Populus trichocarpa HOM05D005269 ORTHO05D006429 2.2e-26 122.5 116 54.3
TWI32G0228 Tripterygium wilfordii HOM05D005269 ORTHO05D006429 2.2e-26 122.5 134 49.3
Carub.0001s0919 Capsella rubella HOM05D005269 ORTHO05D006429 5.0e-26 121.3 120 50.8
Thecc.05G226600 Theobroma cacao HOM05D005269 ORTHO05D006429 5.0e-26 121.3 123 54.5
Manes.09G130300 Manihot esculenta HOM05D005269 ORTHO05D006429 6.5e-26 120.9 123 53.7
Nitab4.5_0001769g0050 Nicotiana tabacum HOM05D005269 ORTHO05D006429 6.5e-26 120.9 125 52.8
CsaV3_5G005690 Cucumis sativus L. HOM05D005269 ORTHO05D006429 1.1e-25 120.2 128 53.9
ClCG01G005450 Citrullus lanatus HOM05D005269 ORTHO05D006429 1.9e-25 119.4 130 51.5
Cfa016104 Carpinus fangiana HOM05D005269 ORTHO05D006429 2.5e-25 119.0 135 49.6
AUR62006583 Chenopodium quinoa HOM05D005269 ORTHO05D006429 3.2e-25 118.6 120 56.7
Sc16g0010860 Simmondsia chinensis HOM05D005269 ORTHO05D006429 3.2e-25 118.6 117 54.7
Ah.04g159550 Amaranthus hybridus HOM05D005269 ORTHO05D006429 4.2e-25 118.2 120 50.0
Thecc.05G226200 Theobroma cacao HOM05D005269 ORTHO05D006429 5.5e-25 117.9 123 53.7
ATR0568G075 Amborella trichopoda HOM05D005269 ORTHO05D006429 9.3e-25 117.1 125 51.2
COL.COLO4_12968 Corchorus olitorius HOM05D005269 ORTHO05D006429 9.3e-25 117.1 120 51.7
RcHm_v2.0_Chr2g0117101 Rosa chinensis HOM05D005269 ORTHO05D006429 9.3e-25 117.1 118 48.3
Potri.013G076400 Populus trichocarpa HOM05D005269 ORTHO05D006429 1.2e-24 116.7 118 56.8
Nn1g09278 Nelumbo nucifera HOM05D005269 ORTHO05D006429 1.6e-24 116.3 121 53.7
Thecc.05G226400 Theobroma cacao HOM05D005269 ORTHO05D006429 1.6e-24 116.3 117 53.8
unitig_52.g17685 Utricularia gibba HOM05D005269 ORTHO05D006429 2.1e-24 115.9 116 51.7
Migut.H00004 Erythranthe guttata HOM05D005269 ORTHO05D006429 2.7e-24 115.5 131 49.6
Gorai.007G246800 Gossypium raimondii HOM05D005269 ORTHO05D006429 2.7e-24 115.5 118 50.8
HanXRQChr17g0540921 Helianthus annuus HOM05D005269 ORTHO05D006429 2.7e-24 115.5 129 52.7
Solyc05g053520.3 Solanum lycopersicum HOM05D005269 ORTHO05D006429 2.7e-24 115.5 128 53.1
FAN26G3478 Fragaria x ananassa HOM05D005269 ORTHO05D006429 3.5e-24 115.2 116 56.9
Gohir.D11G234500 Gossypium hirsutum HOM05D005269 ORTHO05D006429 3.5e-24 115.2 118 51.7
Psat7g094200 Pisum sativum HOM05D005269 ORTHO05D006429 3.5e-24 115.2 118 48.3
Sopen05g032040 Solanum pennellii HOM05D005269 ORTHO05D006429 3.5e-24 115.2 128 52.3
Psat7g094160 Pisum sativum HOM05D005269 ORTHO05D006429 4.6e-24 114.8 118 49.2
CAN.G17.24 Capsicum annuum HOM05D005269 ORTHO05D006429 6.1e-24 114.4 123 53.7
Duzib128G1401 Durio zibethinus HOM05D005269 ORTHO05D006429 6.1e-24 114.4 123 53.7
Glyma.05G124300 Glycine max HOM05D005269 ORTHO05D006429 6.1e-24 114.4 111 51.4
Sabra13G0065600 Salix brachista HOM05D005269 ORTHO05D006429 6.1e-24 114.4 116 52.6
SGA_v2.0_scaffold18G08210 Striga asiatica HOM05D005269 ORTHO05D006429 6.1e-24 114.4 117 51.3
PSO063G4725 Papaver somniferum HOM05D005269 ORTHO05D006429 7.9e-24 114.0 117 51.3
FAN23G2200 Fragaria x ananassa HOM05D005269 ORTHO05D006429 1.0e-23 113.6 115 56.5
Eucgr.L00611 Eucalyptus grandis HOM05D005269 ORTHO05D006429 1.3e-23 113.2 117 50.4
Gohir.A11G225900 Gossypium hirsutum HOM05D005269 ORTHO05D006429 1.3e-23 113.2 118 50.8
PSO782G4777 Papaver somniferum HOM05D005269 ORTHO05D006429 1.3e-23 113.2 117 51.3
arahy.Tifrunner.gnm1.ann1.UWAC6K Arachis hypogaea HOM05D005269 ORTHO05D006429 1.8e-23 112.8 111 49.5
AUR62000236 Chenopodium quinoa HOM05D005269 ORTHO05D006429 2.3e-23 112.5 120 54.2
FvH4_1g22780 Fragaria vesca HOM05D005269 ORTHO05D006429 2.3e-23 112.5 116 55.2
Nitab4.5_0001066g0040 Nicotiana tabacum HOM05D005269 ORTHO05D006429 2.3e-23 112.5 127 50.4
MBI04_g30790_MAGBIO Magnolia biondii HOM05D005269 ORTHO05D006429 3.0e-23 112.1 117 52.1
Gohir.A13G001000 Gossypium hirsutum HOM05D005269 ORTHO05D006429 3.9e-23 111.7 118 50.8
Lsat_1_v5_gn_9_46181 Lactuca sativa HOM05D005269 ORTHO05D006429 5.1e-23 111.3 130 50.8
ECA232G2798 Erigeron canadensis HOM05D005251 ORTHO05D006680 6.7e-23 110.9 135 48.1
Sed0022400 Sechium edule HOM05D005269 ORTHO05D006429 1.1e-22 110.2 119 51.3
Hund07408 Selenicereus undatus HOM05D005269 ORTHO05D006429 1.5e-22 109.8 121 50.4
FAN28G1075 Fragaria x ananassa HOM05D005269 ORTHO05D006429 2.5e-22 109.0 110 52.7
FAN19G2412 Fragaria x ananassa HOM05D005269 ORTHO05D006429 3.3e-22 108.6 116 54.3
Sed0009591 Sechium edule HOM05D005269 ORTHO05D006429 7.4e-22 107.5 130 47.7
Aqoxy6G02173 Aquilegia oxysepala HOM05D005269 ORTHO05D006429 1.6e-21 106.3 91 54.9
VMungo0251G2623 Vigna mungo HOM05D005269 ORTHO05D006429 2.2e-21 105.9 119 49.6
Ah.06g194960 Amaranthus hybridus HOM05D005269 ORTHO05D006429 4.8e-21 104.8 115 47.0
arahy.Tifrunner.gnm1.ann1.FKKB7G Arachis hypogaea HOM05D005269 ORTHO05D006429 4.8e-21 104.8 116 47.4
Lj4g0020860 Lotus japonicus HOM05D005269 ORTHO05D006429 4.8e-21 104.8 109 47.7
Actinidia04559 Actinidia chinensis HOM05D005269 ORTHO05D006429 6.3e-21 104.4 94 64.9
C05p07920 Brassica napus HOM05D005269 ORTHO05D006429 8.2e-21 104.0 66 69.7
Gorai.013G185000 Gossypium raimondii HOM05D005269 ORTHO05D006429 1.1e-20 103.6 112 47.3
Phvul.002G201100 Phaseolus vulgaris HOM05D005269 ORTHO05D006429 1.8e-20 102.8 117 49.6
Ca_18303_v3 Cicer arietinum L. HOM05D005269 ORTHO05D006429 2.4e-20 102.4 112 44.6
Medtr4g094465 Medicago truncatula HOM05D005269 ORTHO05D006429 4.1e-20 101.7 121 46.3
Phvul.002G201200 Phaseolus vulgaris HOM05D005269 ORTHO05D006429 4.1e-20 101.7 126 42.9
Gohir.D13G162800 Gossypium hirsutum HOM05D005269 ORTHO05D006429 3.4e-19 98.6 113 46.0
Lalb_Chr07g0189121 Lupinus albus HOM05D005269 ORTHO05D006429 2.2e-18 95.9 110 46.4
CDE02G3654 Ceratophyllum demersum HOM05D005269 ORTHO05D006429 3.8e-18 95.1 111 44.1
Mapoly0002s0066 Marchantia polymorpha HOM05D005269 ORTHO05D006429 5.0e-18 94.7 136 47.1
CDE11G1263 Ceratophyllum demersum HOM05D005269 ORTHO05D006429 1.1e-17 93.6 118 44.1
Glyma.08G079500 Glycine max HOM05D005269 ORTHO05D006429 1.4e-17 93.2 100 51.0
Gohir.A13G157700 Gossypium hirsutum HOM05D005269 ORTHO05D006429 9.4e-17 90.5 102 47.1
TPR.G23807 Trifolium pratense HOM05D005269 ORTHO05D006429 1.0e-15 87.0 115 40.0
HPP92_001933 Vanilla planifolia HOM05D005269 ORTHO05D006429 2.3e-15 85.9 129 42.6
Glyma.15G135000 Glycine max HOM05D005269 ORTHO05D006429 3.9e-15 85.1 104 43.3
Pp3c4_21450 Physcomitrium patens HOM05D005269 ORTHO05D006429 1.5e-14 83.2 81 51.9
TPR.G31897 Trifolium pratense HOM05D005269 ORTHO05D006429 1.5e-14 83.2 109 46.8
AagrBONN_evm.TU.Sc2ySwM_344.2125 Anthoceros agrestis HOM05D005269 ORTHO05D006429 2.0e-14 82.8 59 59.3
SEGI_20967 Sequoiadendron giganteum HOM05D005269 ORTHO05D006429 3.3e-14 82.0 146 37.0
Zm00001eb318480 Zea mays HOM05D005269 ORTHO05D006429 5.7e-14 81.3 130 36.2
Phvul.006G123900 Phaseolus vulgaris HOM05D005269 ORTHO05D006429 1.3e-13 80.1 89 44.9
SEGI_08095 Sequoiadendron giganteum HOM05D005269 ORTHO05D006429 2.4e-12 75.9 125 36.0
SEGI_01057 Sequoiadendron giganteum HOM05D005269 ORTHO05D006429 5.3e-12 74.7 80 42.5
SMO134G0019 Selaginella moellendorffii HOM05D001491 ORTHO05D001443 2.6e-11 72.4 108 35.2
Medtr4g094458 Medicago truncatula HOM05D005269 ORTHO05D006429 3.4e-11 72.0 66 48.5
Os08g0163300 Oryza sativa ssp. japonica HOM05D005269 ORTHO05D006429 3.4e-11 72.0 154 35.1
Medtr1g105865 Medicago truncatula HOM05D005269 ORTHO05D006429 4.5e-11 71.6 95 43.2
PRCOL_00003345 Prasinoderma coloniale HOM05D005269 ORTHO05D006429 1.0e-10 70.5 116 37.1
AUR62032913 Chenopodium quinoa HOM05D005269 ORTHO05D006429 1.7e-10 69.7 55 58.2
Os09g0520100 Oryza sativa ssp. japonica HOM05D005269 ORTHO05D006429 3.8e-10 68.6 130 33.8
Zm00001eb415390 Zea mays HOM05D005269 ORTHO05D006429 5.5e-09 64.7 62 48.4
Medtr5g006580 Medicago truncatula HOM05D004187 ORTHO05D004890 1.2e-08 63.5 49 51.0
MCO11G533 Micromonas commoda HOM05D005269 ORTHO05D006429 1.2e-08 63.5 100 40.0
Mapoly0080s0095 Marchantia polymorpha HOM05D005269 ORTHO05D006429 1.6e-08 63.2 59 49.2
CDE02G2358 Ceratophyllum demersum HOM05D005269 ORTHO05D006429 2.7e-08 62.4 45 62.2
Phvul.006G123800 Phaseolus vulgaris HOM05D005269 ORTHO05D006429 3.0e-07 58.9 78 48.7
Nitab4.5_0002284g0060 Nicotiana tabacum HOM05D005269 ORTHO05D006429 5.7e-06 54.7 117 35.0
Cre06.g292950 Chlamydomonas reinhardtii HOM05D005269 ORTHO05D006429 9.7e-06 53.9 124 31.5

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (0 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (3 genes)
Gossypium hirsutum (5 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (2 genes)
Medicago truncatula (4 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (3 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (4 genes)
Physcomitrium patens (1 genes)
Pisum sativum (2 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (0 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (3 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (3 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings