Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0033101 Camellia sinensis var. sinensis HOM05D005356 ORTHO05D006596 5.3e-148 527.7 275 100.0
vmacro22188 Vaccinium macrocarpon HOM05D005356 ORTHO05D006596 2.0e-91 339.7 268 71.3
Rhsim09G0214300 Rhododendron simsii HOM05D005356 ORTHO05D006596 1.7e-90 336.7 265 72.5
TAR629G3426 Trochodendron aralioides HOM05D005356 ORTHO05D006596 1.4e-87 327.0 258 70.9
Actinidia33804 Actinidia chinensis HOM05D005356 ORTHO05D006596 8.9e-87 324.3 219 79.0
Dinv17238 Davidia involucrata HOM05D005356 ORTHO05D006596 1.3e-82 310.5 262 67.6
Potri.013G076100 Populus trichocarpa HOM05D005356 ORTHO05D006596 3.9e-82 308.9 270 63.7
TAR375G1012 Trochodendron aralioides HOM05D005356 ORTHO05D006596 1.9e-81 306.6 256 68.8
Sabra13G0065300 Salix brachista HOM05D005356 ORTHO05D006596 2.8e-80 302.8 211 74.9
Atru.chr12.1818 Acer truncatum HOM05D005356 ORTHO05D006596 1.4e-79 300.4 219 71.7
Duzib177G1190 Durio zibethinus HOM05D005356 ORTHO05D006596 5.2e-79 298.5 259 64.1
Sabra19G0053800 Salix brachista HOM05D005356 ORTHO05D006596 6.8e-79 298.1 249 65.5
MBI04_g30781_MAGBIO Magnolia biondii HOM05D005356 ORTHO05D006596 8.9e-79 297.7 261 64.8
Thecc.05G227000 Theobroma cacao HOM05D005356 ORTHO05D006596 8.9e-79 297.7 251 67.7
Gorai.004G255200 Gossypium raimondii HOM05D005356 ORTHO05D006596 1.5e-78 297.0 256 66.4
Prupe.2G329800 Prunus persica HOM05D005356 ORTHO05D006596 1.5e-78 297.0 201 74.1
Gohir.A08G221634 Gossypium hirsutum HOM05D005356 ORTHO05D006596 5.8e-78 295.0 245 66.5
Lj3A883T53 Lonicera japonica HOM05D005356 ORTHO05D006596 9.9e-78 294.3 222 68.9
Ciclev10031697m.g Citrus clementina HOM05D005356 ORTHO05D006596 2.9e-77 292.7 252 61.5
Cpa.g.sc43.152 Carica papaya HOM05D005356 ORTHO05D006596 3.7e-77 292.4 251 63.7
Manes.08G159200 Manihot esculenta HOM05D005356 ORTHO05D006596 3.7e-77 292.4 243 64.6
Lalb_Chr01g0000721 Lupinus albus HOM05D005356 ORTHO05D006596 4.9e-77 292.0 238 68.1
Lj3g0010653 Lotus japonicus HOM05D005356 ORTHO05D006596 6.4e-77 291.6 235 68.1
Oeu030531.2 Olea europaea HOM05D005356 ORTHO05D006596 6.4e-77 291.6 231 66.2
Hma1.2p1_0564F.1_g179310 Hydrangea macrophylla HOM05D005356 ORTHO05D006596 1.1e-76 290.8 280 63.6
Hma1.2p1_0419F.1_g149580 Hydrangea macrophylla HOM05D005356 ORTHO05D006596 1.9e-76 290.0 225 71.6
COL.COLO4_32921 Corchorus olitorius HOM05D005356 ORTHO05D006596 2.4e-76 289.7 207 71.5
CAN.G2009.1 Capsicum annuum HOM05D005356 ORTHO05D006596 4.1e-76 288.9 255 61.2
MD07G1311300 Malus domestica HOM05D005356 ORTHO05D006596 4.1e-76 288.9 205 73.2
CiPaw.05G210900 Carya illinoinensis HOM05D005356 ORTHO05D006596 5.4e-76 288.5 265 61.5
CiPaw.06G037000 Carya illinoinensis HOM05D005356 ORTHO05D006596 5.4e-76 288.5 260 61.9
Glyma.12G013400 Glycine max HOM05D005356 ORTHO05D006596 1.6e-75 287.0 229 66.8
Sc03g0005650 Simmondsia chinensis HOM05D005356 ORTHO05D006596 1.6e-75 287.0 284 60.2
FvH4_7g34281 Fragaria vesca HOM05D005356 ORTHO05D006596 2.1e-75 286.6 223 67.7
Medtr0172s0020 Medicago truncatula HOM05D005356 ORTHO05D006596 2.1e-75 286.6 252 63.5
Oeu015013.2 Olea europaea HOM05D005356 ORTHO05D006596 2.1e-75 286.6 208 70.7
Nn3g19190 Nelumbo nucifera HOM05D005356 ORTHO05D006596 3.5e-75 285.8 259 61.8
FAN03G1362 Fragaria x ananassa HOM05D005356 ORTHO05D006596 4.6e-75 285.4 221 67.9
PGR008G0003 Punica granatum HOM05D005356 ORTHO05D006596 4.6e-75 285.4 232 66.8
ECA232G1465 Erigeron canadensis HOM05D005356 ORTHO05D006596 1.7e-74 283.5 263 61.2
Gorai.007G246900 Gossypium raimondii HOM05D005356 ORTHO05D006596 1.7e-74 283.5 249 63.1
PGR119G0933 Punica granatum HOM05D005356 ORTHO05D006596 1.7e-74 283.5 231 67.5
arahy.Tifrunner.gnm1.ann1.RW14FX Arachis hypogaea HOM05D005356 ORTHO05D006596 2.3e-74 283.1 236 64.8
Nitab4.5_0000299g0040 Nicotiana tabacum HOM05D005356 ORTHO05D006596 2.3e-74 283.1 250 60.8
Gohir.D11G234600 Gossypium hirsutum HOM05D005356 ORTHO05D006596 3.9e-74 282.3 249 62.7
Haze_00348 Corylus avellana HOM05D005356 ORTHO05D006596 5.1e-74 282.0 208 70.7
Nitab4.5_0002990g0020 Nicotiana tabacum HOM05D005356 ORTHO05D006596 5.1e-74 282.0 255 59.6
PGR131G0008 Punica granatum HOM05D005356 ORTHO05D006596 5.1e-74 282.0 231 67.1
HanXRQChr05g0139001 Helianthus annuus HOM05D005356 ORTHO05D006596 8.6e-74 281.2 259 62.9
Nn1g09227 Nelumbo nucifera HOM05D005356 ORTHO05D006596 8.6e-74 281.2 223 66.4
RcHm_v2.0_Chr1g0384641 Rosa chinensis HOM05D005356 ORTHO05D006596 8.6e-74 281.2 204 69.1
Sopen04g026680 Solanum pennellii HOM05D005356 ORTHO05D006596 8.6e-74 281.2 255 60.0
PGSC0003DMG400024812 Solanum tuberosum HOM05D005356 ORTHO05D006596 8.6e-74 281.2 203 69.0
Aqoxy1G01762 Aquilegia oxysepala HOM05D005356 ORTHO05D006596 1.1e-73 280.8 256 60.5
PSO782G1515 Papaver somniferum HOM05D005356 ORTHO05D006596 1.1e-73 280.8 207 70.5
Solyc04g064720.3 Solanum lycopersicum HOM05D005356 ORTHO05D006596 1.1e-73 280.8 255 60.0
Phvul.011G016500 Phaseolus vulgaris HOM05D005356 ORTHO05D006596 1.9e-73 280.0 197 71.1
arahy.Tifrunner.gnm1.ann1.509DQ1 Arachis hypogaea HOM05D005356 ORTHO05D006596 2.5e-73 279.6 236 64.4
Cc10_g12920 Coffea canephora HOM05D005356 ORTHO05D006596 2.5e-73 279.6 203 70.0
SGA_v2.0_scaffold19G08642 Striga asiatica HOM05D005356 ORTHO05D006596 2.5e-73 279.6 218 64.2
VMungo0647G2360 Vigna mungo HOM05D005356 ORTHO05D006596 2.5e-73 279.6 262 57.6
Migut.C01041 Erythranthe guttata HOM05D005356 ORTHO05D006596 3.3e-73 279.3 201 71.1
THA.LOC104802905 Tarenaya hassleriana HOM05D005356 ORTHO05D006596 3.3e-73 279.3 205 68.8
Sopen04g026690 Solanum pennellii HOM05D005356 ORTHO05D006596 4.3e-73 278.9 253 59.7
Peaxi162Scf00263g00323 Petunia axillaris HOM05D005356 ORTHO05D006596 5.6e-73 278.5 255 60.0
Aqoxy3G04210 Aquilegia oxysepala HOM05D005356 ORTHO05D006596 7.3e-73 278.1 257 61.9
SalBow7G2700 Salvia bowleyana HOM05D005356 ORTHO05D006596 9.6e-73 277.7 203 70.4
GSVIVG01024263001 Vitis vinifera HOM05D005356 ORTHO05D006596 9.6e-73 277.7 218 68.3
Hund11857 Selenicereus undatus HOM05D005356 ORTHO05D006596 1.6e-72 276.9 249 61.4
THA.LOC104820830 Tarenaya hassleriana HOM05D005356 ORTHO05D006596 1.6e-72 276.9 208 66.3
PSO063G2098 Papaver somniferum HOM05D005356 ORTHO05D006596 2.8e-72 276.2 207 69.6
CDE11G1065 Ceratophyllum demersum HOM05D005356 ORTHO05D006596 8.1e-72 274.6 173 79.2
Gohir.A11G226000 Gossypium hirsutum HOM05D005356 ORTHO05D006596 8.1e-72 274.6 248 61.7
Lsat_1_v5_gn_9_47941 Lactuca sativa HOM05D005356 ORTHO05D006596 2.4e-71 273.1 213 67.6
Psat0s2502g0200 Pisum sativum HOM05D005356 ORTHO05D006596 4.4e-70 268.9 251 59.0
DCAR_009031 Daucus carota HOM05D005356 ORTHO05D006596 5.8e-70 268.5 202 66.8
SalBow6G3313 Salvia bowleyana HOM05D005356 ORTHO05D006596 5.8e-70 268.5 225 63.6
Sed0019262 Sechium edule HOM05D005356 ORTHO05D006596 5.8e-70 268.5 257 57.2
Os04g0602400 Oryza sativa ssp. japonica HOM05D005356 ORTHO05D006596 1.3e-69 267.3 174 78.7
Sed0017544 Sechium edule HOM05D005356 ORTHO05D006596 3.8e-69 265.8 204 67.2
MSTRG.24194 Avicennia marina HOM05D005356 ORTHO05D006596 4.9e-69 265.4 203 67.0
CsaV3_2G035860 Cucumis sativus L. HOM05D005356 ORTHO05D006596 1.1e-68 264.2 248 57.3
Migut.N03237 Erythranthe guttata HOM05D005356 ORTHO05D006596 1.1e-68 264.2 247 59.5
unitig_744.g24563 Utricularia gibba HOM05D005356 ORTHO05D006596 1.1e-68 264.2 179 73.2
TPR.G9827 Trifolium pratense HOM05D005356 ORTHO05D006596 1.4e-68 263.8 203 67.5
MSTRG.22381 Avicennia marina HOM05D005356 ORTHO05D006596 3.2e-68 262.7 216 63.9
CANSAT21G1742 Cannabis sativa HOM05D005356 ORTHO05D006596 4.2e-68 262.3 181 70.7
MELO3C024754.2 Cucumis melo HOM05D005356 ORTHO05D006596 4.2e-68 262.3 238 59.7
ATR0369G003 Amborella trichopoda HOM05D005356 ORTHO05D006596 5.4e-68 261.9 174 75.3
Sp6g26700 Schrenkiella parvula HOM05D005356 ORTHO05D006596 7.1e-68 261.5 205 65.9
AL6G28610 Arabidopsis lyrata HOM05D005356 ORTHO05D006596 1.2e-67 260.8 208 63.9
Eucgr.A02993 Eucalyptus grandis HOM05D005356 ORTHO05D006596 1.2e-67 260.8 175 74.3
Zm00001eb071770 Zea mays HOM05D005356 ORTHO05D006596 1.2e-67 260.8 174 75.9
EL10Ac3g05893 Beta vulgaris HOM05D005356 ORTHO05D006596 2.1e-67 260.0 218 64.7
Aa31LG11G12150 Aethionema arabicum HOM05D005356 ORTHO05D006596 3.5e-67 259.2 202 65.3
A10p21860 Brassica napus HOM05D005356 ORTHO05D006596 4.6e-67 258.8 202 67.3
BcaB08g36764 Brassica carinata HOM05D005356 ORTHO05D006596 1.0e-66 257.7 209 64.6
BolC2t06824H Brassica oleracea HOM05D005356 ORTHO05D006596 1.7e-66 256.9 205 66.3
A10p21870 Brassica napus HOM05D005356 ORTHO05D006596 6.6e-66 255.0 202 66.3
AT5G17520 Arabidopsis thaliana HOM05D005356 ORTHO05D006596 8.7e-66 254.6 213 61.5
C02p09120 Brassica napus HOM05D005356 ORTHO05D006596 8.7e-66 254.6 206 66.0
BraA10t44246Z Brassica rapa HOM05D005356 ORTHO05D006596 8.7e-66 254.6 202 66.3
BcaC04g18781 Brassica carinata HOM05D005356 ORTHO05D006596 1.1e-65 254.2 205 65.4
A02p04240 Brassica napus HOM05D005356 ORTHO05D006596 1.5e-65 253.8 205 65.9
BraA02t05387Z Brassica rapa HOM05D005356 ORTHO05D006596 1.5e-65 253.8 205 65.9
BcaC03g13524 Brassica carinata HOM05D005356 ORTHO05D006596 3.3e-65 252.7 206 65.0
AUR62015463 Chenopodium quinoa HOM05D005356 ORTHO05D006596 3.3e-65 252.7 220 62.7
AUR62002252 Chenopodium quinoa HOM05D005356 ORTHO05D006596 4.3e-65 252.3 220 62.7
C09p59620 Brassica napus HOM05D005356 ORTHO05D006596 1.3e-64 250.8 205 64.4
BolC9t58801H Brassica oleracea HOM05D005356 ORTHO05D006596 1.3e-64 250.8 205 64.4
CARHR195670 Cardamine hirsuta HOM05D005356 ORTHO05D006596 2.1e-64 250.0 203 62.1
SEGI_37553 Sequoiadendron giganteum HOM05D005356 ORTHO05D006596 4.4e-62 242.3 174 70.1
MD01G1240200 Malus domestica HOM05D005356 ORTHO05D006596 2.7e-59 233.0 261 54.0
Manes.09G130400 Manihot esculenta HOM05D005356 ORTHO05D006596 1.8e-50 203.8 210 54.8
Mapoly0051s0014 Marchantia polymorpha HOM05D005356 ORTHO05D006596 3.9e-50 202.6 203 52.7
Pp3c6_18710 Physcomitrium patens HOM05D005356 ORTHO05D006596 1.1e-49 201.1 177 57.1
Ca_19620_v3 Cicer arietinum L. HOM05D005356 ORTHO05D006596 2.5e-49 199.9 127 78.7
Gohir.D08G239900 Gossypium hirsutum HOM05D005356 ORTHO05D006596 4.3e-49 199.1 127 79.5
SMO012G0030 Selaginella moellendorffii HOM05D005356 ORTHO05D006596 4.8e-48 195.7 211 49.3
AagrBONN_evm.TU.Sc2ySwM_228.477 Anthoceros agrestis HOM05D005356 ORTHO05D006596 5.8e-46 188.7 173 54.9
AT5G17523 Arabidopsis thaliana HOM05D005356 ORTHO05D006596 2.7e-43 179.9 162 59.3
Pp3c24_890 Physcomitrium patens HOM05D005356 ORTHO05D006596 1.3e-42 177.6 232 45.3
ClCG02G007870 Citrullus lanatus HOM05D005356 ORTHO05D006596 2.3e-42 176.8 127 69.3
SMO118G0252 Selaginella moellendorffii HOM05D005356 ORTHO05D006596 1.1e-39 167.9 175 53.1
Carub.0006s1575 Capsella rubella HOM05D005356 ORTHO05D006596 1.0e-37 161.4 120 66.7
HPP92_022764 Vanilla planifolia HOM05D005356 ORTHO05D006596 4.8e-24 115.9 80 67.5
CANSAT21G0168 Cannabis sativa HOM05D005356 ORTHO05D006596 7.9e-19 98.6 71 63.4
Zm00001eb003380 Zea mays HOM05D001522 ORTHO05D001547 1.0e-18 98.2 78 67.9
Pp3c23_14070 Physcomitrium patens HOM05D005356 ORTHO05D006596 8.8e-18 95.1 104 48.1
CBR_g17688 Chara braunii HOM05D005356 ORTHO05D006596 1.7e-16 90.9 104 45.2
Cre12.g486600 Chlamydomonas reinhardtii HOM05D005356 ORTHO05D006596 4.1e-15 86.3 201 29.4
HPP92_022763 Vanilla planifolia HOM05D005356 ORTHO05D006596 2.0e-14 84.0 133 42.1
Actinidia04557 Actinidia chinensis HOM05D005356 ORTHO05D006596 1.9e-12 77.4 215 36.3
MCO10G093 Micromonas commoda HOM05D005356 ORTHO05D006596 4.2e-12 76.3 209 28.2
PRCOL_00004977 Prasinoderma coloniale HOM05D005356 ORTHO05D006596 4.0e-10 69.7 101 36.6
Os08g0411000 Oryza sativa ssp. japonica HOM05D000911 ORTHO05D295734 4.5e-06 56.2 115 33.9

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (5 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (1 genes)
Glycine max (1 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (3 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (3 genes)
Quercus lobata (0 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (2 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings