Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032760 Camellia sinensis var. sinensis HOM05D007252 ORTHO05D009074 1.3e-28 129.0 66 100.0
CSS0018987 Camellia sinensis var. sinensis HOM05D007252 ORTHO05D009074 6.5e-28 126.7 66 98.5
Cfa020240 Carpinus fangiana HOM05D007252 ORTHO05D009074 3.5e-21 104.4 60 81.7
QL08p064685 Quercus lobata HOM05D007252 ORTHO05D009074 1.0e-20 102.8 61 82.0
COL.COLO4_09763 Corchorus olitorius HOM05D007252 ORTHO05D009074 2.3e-20 101.7 65 80.0
Gohir.A04G010100 Gossypium hirsutum HOM05D007252 ORTHO05D009074 5.0e-20 100.5 61 80.3
Ciclev10010136m.g Citrus clementina HOM05D007252 ORTHO05D009074 1.1e-19 99.4 59 79.7
Aa31LG5G12260 Aethionema arabicum HOM05D007252 ORTHO05D009074 1.5e-19 99.0 58 75.9
BcaC09g50629 Brassica carinata HOM05D007252 ORTHO05D009074 1.5e-19 99.0 61 75.4
BcaC09g52252 Brassica carinata HOM05D007252 ORTHO05D009074 1.5e-19 99.0 61 75.4
C01p22730 Brassica napus HOM05D007252 ORTHO05D009074 1.5e-19 99.0 61 75.4
BolC1t02202H Brassica oleracea HOM05D007252 ORTHO05D009074 1.5e-19 99.0 61 75.4
BcaB03g12504 Brassica carinata HOM05D007252 ORTHO05D009074 2.5e-19 98.2 61 75.4
A08p20750 Brassica napus HOM05D007252 ORTHO05D009074 2.5e-19 98.2 61 75.4
Gohir.D05G377900 Gossypium hirsutum HOM05D007252 ORTHO05D009074 2.5e-19 98.2 61 78.7
Gorai.009G445700 Gossypium raimondii HOM05D007252 ORTHO05D009074 3.3e-19 97.8 61 77.0
A01p17930 Brassica napus HOM05D007252 ORTHO05D009074 4.2e-19 97.4 61 73.8
BraA01t01748Z Brassica rapa HOM05D007252 ORTHO05D009074 4.2e-19 97.4 61 73.8
AL7G26180 Arabidopsis lyrata HOM05D007252 ORTHO05D009074 5.5e-19 97.1 61 72.1
FAN21G1608 Fragaria x ananassa HOM05D007252 ORTHO05D009074 5.5e-19 97.1 61 75.4
RcHm_v2.0_Chr5g0041991 Rosa chinensis HOM05D007252 ORTHO05D009074 5.5e-19 97.1 61 75.4
BraA08t34029Z Brassica rapa HOM05D007252 ORTHO05D009074 7.2e-19 96.7 61 73.8
Carub.0007s1418 Capsella rubella HOM05D007252 ORTHO05D009074 1.2e-18 95.9 60 73.3
CANSAT80G1100 Cannabis sativa HOM05D007252 ORTHO05D009074 1.6e-18 95.5 61 75.4
Nn7g36100 Nelumbo nucifera HOM05D002789 ORTHO05D003185 1.6e-18 95.5 60 76.7
Ciclev10003084m.g Citrus clementina HOM05D007252 ORTHO05D009074 2.1e-18 95.1 61 75.4
FvH4_3g23810 Fragaria vesca HOM05D007252 ORTHO05D009074 2.1e-18 95.1 61 72.1
FAN11G0552 Fragaria x ananassa HOM05D007252 ORTHO05D009074 2.1e-18 95.1 61 72.1
MD11G1206600 Malus domestica HOM05D007252 ORTHO05D009074 2.1e-18 95.1 62 72.6
Thecc.07G024200 Theobroma cacao HOM05D007252 ORTHO05D009074 2.1e-18 95.1 61 77.0
Prupe.4G229900 Prunus persica HOM05D007252 ORTHO05D009074 2.8e-18 94.7 61 70.5
BcaC07g38242 Brassica carinata HOM05D007252 ORTHO05D009074 3.6e-18 94.4 61 73.8
C08p09910 Brassica napus HOM05D007252 ORTHO05D009074 3.6e-18 94.4 61 73.8
Sc07g0002910 Simmondsia chinensis HOM05D007252 ORTHO05D009074 6.1e-18 93.6 65 69.2
BolC8t48668H Brassica oleracea HOM05D007252 ORTHO05D009074 1.0e-17 92.8 57 77.2
CAN.G337.42 Capsicum annuum HOM05D007252 ORTHO05D009074 1.8e-17 92.0 61 70.5
PGSC0003DMG402022195 Solanum tuberosum HOM05D007252 ORTHO05D009074 4.0e-17 90.9 61 70.5
CARHR234280 Cardamine hirsuta HOM05D007252 ORTHO05D009074 5.2e-17 90.5 61 67.2
Manes.03G134300 Manihot esculenta HOM05D007252 ORTHO05D009074 6.8e-17 90.1 58 77.6
MD03G1190100 Malus domestica HOM05D007252 ORTHO05D009074 1.2e-16 89.4 62 69.4
Potri.008G011620 Populus trichocarpa HOM05D007252 ORTHO05D009074 1.2e-16 89.4 59 69.5
Phvul.006G051100 Phaseolus vulgaris HOM05D007252 ORTHO05D009074 1.5e-16 89.0 60 68.3
Sabra08G0007100 Salix brachista HOM05D000045 ORTHO05D000067 2.0e-16 88.6 59 69.5
Lsat_1_v5_gn_0_15441 Lactuca sativa HOM05D007252 ORTHO05D009074 3.4e-16 87.8 60 70.0
VMungo0540G2390 Vigna mungo HOM05D007252 ORTHO05D009074 3.4e-16 87.8 60 66.7
AUR62015933 Chenopodium quinoa HOM05D007252 ORTHO05D009074 9.8e-16 86.3 60 68.3
AUR62040676 Chenopodium quinoa HOM05D007252 ORTHO05D009074 1.3e-15 85.9 60 66.7
Lj6g0008035 Lotus japonicus HOM05D007252 ORTHO05D009074 1.7e-15 85.5 60 68.3
Lalb_Chr15g0081811 Lupinus albus HOM05D007252 ORTHO05D009074 2.8e-15 84.7 60 65.0
Lalb_Chr15g0081831 Lupinus albus HOM05D007252 ORTHO05D009074 3.7e-15 84.3 60 63.3
Lalb_Chr15g0081851 Lupinus albus HOM05D007252 ORTHO05D009074 3.7e-15 84.3 60 63.3
Lalb_Chr15g0081871 Lupinus albus HOM05D007252 ORTHO05D009074 3.7e-15 84.3 60 63.3
Eucgr.F03517 Eucalyptus grandis HOM05D007252 ORTHO05D009074 4.9e-15 84.0 62 61.3
HanXRQChr03g0076961 Helianthus annuus HOM05D007252 ORTHO05D009074 4.9e-15 84.0 60 63.3
Actinidia39080 Actinidia chinensis HOM05D007252 ORTHO05D009074 8.3e-15 83.2 55 69.1
ECA240G2584 Erigeron canadensis HOM05D007252 ORTHO05D009074 8.3e-15 83.2 60 66.7
Ca_20134_v3 Cicer arietinum L. HOM05D007252 ORTHO05D009074 1.4e-14 82.4 60 65.0
Glyma.18G085000 Glycine max HOM05D007252 ORTHO05D009074 1.8e-14 82.0 60 65.0
Migut.M01689 Erythranthe guttata HOM05D007252 ORTHO05D009074 3.1e-14 81.3 61 65.6
EL10Ac4g07630 Beta vulgaris HOM05D007252 ORTHO05D009074 5.4e-14 80.5 68 60.3
Psat3g156800 Pisum sativum HOM05D007252 ORTHO05D009074 1.2e-13 79.3 60 63.3
Cfa016655 Carpinus fangiana HOM05D007252 ORTHO05D009074 2.7e-13 78.2 53 67.9
CiPaw.10G013800 Carya illinoinensis HOM05D007252 ORTHO05D009074 3.5e-13 77.8 53 67.9
Nn2g15499 Nelumbo nucifera HOM05D007252 ORTHO05D009074 3.5e-13 77.8 61 62.3
SalBow8G3523 Salvia bowleyana HOM05D007252 ORTHO05D009074 5.9e-13 77.0 61 59.0
ECA240G2620 Erigeron canadensis HOM05D000132 ORTHO05D000058 1.3e-12 75.9 60 61.7
TPR.G23623 Trifolium pratense HOM05D007252 ORTHO05D009074 1.3e-12 75.9 60 61.7
Actinidia07909 Actinidia chinensis HOM05D007252 ORTHO05D009074 2.3e-12 75.1 53 69.8
TAR633G2179 Trochodendron aralioides HOM05D002789 ORTHO05D003185 2.9e-12 74.7 55 67.3
HPP92_012649 Vanilla planifolia HOM05D007252 ORTHO05D009074 3.9e-12 74.3 63 58.7
SHI26548 Sapria himalayana HOM05D007252 ORTHO05D009074 5.0e-12 73.9 62 61.3
TWI74G0966 Tripterygium wilfordii HOM05D007252 ORTHO05D009074 8.6e-12 73.2 53 64.2
Cpa.g.sc104.83 Carica papaya HOM05D007252 ORTHO05D009074 3.3e-11 71.2 53 64.2
CiPaw.10G013500 Carya illinoinensis HOM05D007252 ORTHO05D009074 3.3e-11 71.2 53 62.3
FAN17G0382 Fragaria x ananassa HOM05D007252 ORTHO05D009074 3.3e-11 71.2 46 73.9
PGR142G0020 Punica granatum HOM05D007252 ORTHO05D009074 3.3e-11 71.2 53 66.0
Medtr3g055700 Medicago truncatula HOM05D007252 ORTHO05D009074 4.3e-11 70.9 60 56.7
CARHR086150 Cardamine hirsuta HOM05D007252 ORTHO05D009074 1.6e-10 68.9 53 62.3
Cpa.g.c35309 Carica papaya HOM05D007252 ORTHO05D009074 1.6e-10 68.9 47 74.5
DCAR_020730 Daucus carota HOM05D006095 ORTHO05D001225 1.6e-10 68.9 43 74.4
Migut.L01811 Erythranthe guttata HOM05D007252 ORTHO05D009074 1.6e-10 68.9 53 66.0
Manes.09G050900 Manihot esculenta HOM05D007252 ORTHO05D009074 2.8e-10 68.2 53 62.3
Aqoxy6G01551 Aquilegia oxysepala HOM05D007252 ORTHO05D009074 4.7e-10 67.4 59 55.9
Potri.006G207600 Populus trichocarpa HOM05D007252 ORTHO05D009074 6.1e-10 67.0 57 57.9
Sed0008758 Sechium edule HOM05D007252 ORTHO05D009074 8.0e-10 66.6 49 61.2
AT3G11591 Arabidopsis thaliana HOM05D007252 ORTHO05D009074 1.0e-09 66.2 53 58.5
MD14G1032500 Malus domestica HOM05D007252 ORTHO05D009074 2.3e-09 65.1 57 54.4
Sc20g0006500 Simmondsia chinensis HOM05D007252 ORTHO05D009074 5.2e-09 63.9 57 57.9
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 5.2e-09 63.9 57 50.9
BcaC09g48182 Brassica carinata HOM05D007252 ORTHO05D009074 8.9e-09 63.2 53 56.6
BolC1t05305H Brassica oleracea HOM05D007252 ORTHO05D009074 8.9e-09 63.2 53 56.6
CsaV3_6G040900 Cucumis sativus L. HOM05D007252 ORTHO05D009074 8.9e-09 63.2 53 60.4
CARHR049680 Cardamine hirsuta HOM05D007252 ORTHO05D009074 1.2e-08 62.8 43 62.8
COL.COLO4_29654 Corchorus olitorius HOM05D007252 ORTHO05D009074 1.2e-08 62.8 53 56.6
Duzib093G1663 Durio zibethinus HOM05D007252 ORTHO05D009074 1.2e-08 62.8 53 56.6
Lalb_Chr21g0315921 Lupinus albus HOM05D007252 ORTHO05D009074 1.2e-08 62.8 57 52.6
Thecc.05G097600 Theobroma cacao HOM05D007252 ORTHO05D009074 1.2e-08 62.8 53 58.5
BNapus_Darmor_BZH_scaffold_145p00090 Brassica napus HOM05D007252 ORTHO05D009074 1.5e-08 62.4 53 56.6
BraA01t04175Z Brassica rapa HOM05D007252 ORTHO05D009074 1.5e-08 62.4 53 56.6
BcaB04g21127 Brassica carinata HOM05D007252 ORTHO05D009074 2.6e-08 61.6 53 54.7
Gohir.D11G337600 Gossypium hirsutum HOM05D007252 ORTHO05D009074 2.6e-08 61.6 53 54.7
Gorai.007G367600 Gossypium raimondii HOM05D007252 ORTHO05D009074 2.6e-08 61.6 53 54.7
Prupe.7G100100 Prunus persica HOM05D007252 ORTHO05D009074 2.6e-08 61.6 53 54.7
Gohir.A11G318300 Gossypium hirsutum HOM05D007252 ORTHO05D009074 4.4e-08 60.8 53 54.7
Medtr1g058260 Medicago truncatula HOM05D007252 ORTHO05D009074 4.4e-08 60.8 56 48.2
Lj5g0009107 Lotus japonicus HOM05D007252 ORTHO05D009074 5.8e-08 60.5 61 47.5
Aa31LG3G4990 Aethionema arabicum HOM05D007252 ORTHO05D009074 7.5e-08 60.1 53 56.6
FAN09G1620 Fragaria x ananassa HOM05D007252 ORTHO05D009074 7.5e-08 60.1 57 50.9
RcHm_v2.0_Chr3g0474991 Rosa chinensis HOM05D007252 ORTHO05D009074 7.5e-08 60.1 57 50.9
ClCG04G010260 Citrullus lanatus HOM05D007252 ORTHO05D009074 1.3e-07 59.3 43 65.1

Acer truncatum (0 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (2 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (6 genes)
Brassica napus (5 genes)
Brassica oleracea (3 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (3 genes)
Carica papaya (2 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (2 genes)
Coffea canephora (0 genes)
Corchorus olitorius (2 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (0 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (1 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (2 genes)
Lupinus albus (5 genes)
Magnolia biondii (0 genes)
Malus domestica (3 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (0 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (1 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (2 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings