Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032008 Camellia sinensis var. sinensis HOM05D005373 ORTHO05D006617 4.6e-25 117.1 58 100.0
CSS0047138 Camellia sinensis var. sinensis HOM05D005373 ORTHO05D006617 1.1e-18 95.9 53 92.5
Psat4g197520 Pisum sativum HOM05D005373 ORTHO05D006617 3.2e-18 94.4 53 88.7
Actinidia24948 Actinidia chinensis HOM05D005373 ORTHO05D006617 7.0e-18 93.2 53 86.8
CSS0009352 Camellia sinensis var. sinensis HOM05D005373 ORTHO05D006617 7.0e-18 93.2 53 90.6
CARHR157930 Cardamine hirsuta HOM05D005373 ORTHO05D006617 7.0e-18 93.2 53 86.8
Sed0003924 Sechium edule HOM05D005373 ORTHO05D006617 7.0e-18 93.2 53 86.8
SGA_v2.0_scaffold138G35268 Striga asiatica HOM05D005373 ORTHO05D006617 9.2e-18 92.8 53 86.8
Thecc.01G266100 Theobroma cacao HOM05D005373 ORTHO05D006617 9.2e-18 92.8 53 84.9
TPR.G2468 Trifolium pratense HOM05D005373 ORTHO05D006617 9.2e-18 92.8 53 86.8
CSS0017854 Camellia sinensis var. sinensis HOM05D005373 ORTHO05D006617 1.6e-17 92.0 53 84.9
Lalb_Chr03g0041301 Lupinus albus HOM05D005373 ORTHO05D006617 1.6e-17 92.0 53 83.0
AL5G28610 Arabidopsis lyrata HOM05D005373 ORTHO05D006617 2.0e-17 91.7 53 84.9
AT3G49100 Arabidopsis thaliana HOM05D005373 ORTHO05D006617 2.0e-17 91.7 53 84.9
arahy.Tifrunner.gnm1.ann1.W8F73Z Arachis hypogaea HOM05D005373 ORTHO05D006617 2.0e-17 91.7 53 84.9
arahy.Tifrunner.gnm1.ann1.ZBI3RA Arachis hypogaea HOM05D005373 ORTHO05D006617 2.0e-17 91.7 53 84.9
Carub.0005s1529 Capsella rubella HOM05D005373 ORTHO05D006617 2.0e-17 91.7 53 84.9
Thhalv10010849m.g Eutrema salsugineum HOM05D005373 ORTHO05D006617 2.0e-17 91.7 53 84.9
Rhsim01G0268500 Rhododendron simsii HOM05D005373 ORTHO05D006617 2.0e-17 91.7 53 84.9
Sp5g12980 Schrenkiella parvula HOM05D005373 ORTHO05D006617 2.0e-17 91.7 53 84.9
MSTRG.18297 Avicennia marina HOM05D005373 ORTHO05D006617 3.5e-17 90.9 53 84.9
Haze_24544 Corylus avellana HOM05D005373 ORTHO05D006617 3.5e-17 90.9 53 84.9
MELO3C014306.2 Cucumis melo HOM05D005373 ORTHO05D006617 3.5e-17 90.9 53 83.0
CsaV3_2G013670 Cucumis sativus L. HOM05D005373 ORTHO05D006617 3.5e-17 90.9 53 83.0
Duzib211G0177 Durio zibethinus HOM05D005373 ORTHO05D006617 3.5e-17 90.9 53 83.0
FvH4_2g22310 Fragaria vesca HOM05D005373 ORTHO05D006617 3.5e-17 90.9 53 84.9
FAN15G3255 Fragaria x ananassa HOM05D005373 ORTHO05D006617 3.5e-17 90.9 53 84.9
FAN20G0018 Fragaria x ananassa HOM05D005373 ORTHO05D006617 3.5e-17 90.9 53 84.9
FAN24G2777 Fragaria x ananassa HOM05D005373 ORTHO05D006617 3.5e-17 90.9 53 84.9
Glyma.08G346000 Glycine max HOM05D005373 ORTHO05D006617 3.5e-17 90.9 53 83.0
Glyma.18G156300 Glycine max HOM05D005373 ORTHO05D006617 3.5e-17 90.9 53 83.0
Gohir.A08G188600 Gossypium hirsutum HOM05D005373 ORTHO05D006617 3.5e-17 90.9 53 83.0
Gohir.D08G207000 Gossypium hirsutum HOM05D005373 ORTHO05D006617 3.5e-17 90.9 53 83.0
Gorai.004G219200 Gossypium raimondii HOM05D005373 ORTHO05D006617 3.5e-17 90.9 53 83.0
RcHm_v2.0_Chr6g0289311 Rosa chinensis HOM05D005373 ORTHO05D006617 3.5e-17 90.9 53 84.9
TPR.G35732 Trifolium pratense HOM05D005373 ORTHO05D006617 3.5e-17 90.9 53 84.9
Actinidia21168 Actinidia chinensis HOM05D005373 ORTHO05D006617 4.6e-17 90.5 53 83.0
Ah.05g177620 Amaranthus hybridus HOM05D005373 ORTHO05D006617 4.6e-17 90.5 53 83.0
Gohir.A12G149900 Gossypium hirsutum HOM05D005373 ORTHO05D006617 4.6e-17 90.5 53 83.0
Medtr1g070460 Medicago truncatula HOM05D005373 ORTHO05D006617 4.6e-17 90.5 53 84.9
Ciclev10023009m.g Citrus clementina HOM05D005373 ORTHO05D006617 6.0e-17 90.1 53 83.0
COL.COLO4_08280 Corchorus olitorius HOM05D005373 ORTHO05D006617 6.0e-17 90.1 53 83.0
COL.COLO4_29457 Corchorus olitorius HOM05D005373 ORTHO05D006617 6.0e-17 90.1 53 83.0
Dinv22468 Davidia involucrata HOM05D005373 ORTHO05D006617 6.0e-17 90.1 53 84.9
GSVIVG01000751001 Vitis vinifera HOM05D005373 ORTHO05D006617 6.0e-17 90.1 53 84.9
EL10Ac1g00710 Beta vulgaris HOM05D005373 ORTHO05D006617 7.8e-17 89.7 53 83.0
Cfa002338 Carpinus fangiana HOM05D005373 ORTHO05D006617 7.8e-17 89.7 53 83.0
AUR62013793 Chenopodium quinoa HOM05D005373 ORTHO05D006617 7.8e-17 89.7 53 83.0
AUR62023362 Chenopodium quinoa HOM05D005373 ORTHO05D006617 7.8e-17 89.7 53 83.0
ClCG07G000650 Citrullus lanatus HOM05D005373 ORTHO05D006617 7.8e-17 89.7 53 81.1
Migut.D00388 Erythranthe guttata HOM05D005373 ORTHO05D006617 7.8e-17 89.7 53 84.9
Nn3g19526 Nelumbo nucifera HOM05D005373 ORTHO05D006617 7.8e-17 89.7 53 83.0
QL04p081438 Quercus lobata HOM05D005373 ORTHO05D006617 7.8e-17 89.7 52 80.8
QL12p042863 Quercus lobata HOM05D005373 ORTHO05D006617 7.8e-17 89.7 52 80.8
Rhsim12G0063100 Rhododendron simsii HOM05D005373 ORTHO05D006617 7.8e-17 89.7 53 83.0
SGA_v2.0_scaffold1G00570 Striga asiatica HOM05D005373 ORTHO05D006617 7.8e-17 89.7 53 83.0
BcaC07g39386 Brassica carinata HOM05D005373 ORTHO05D006617 1.0e-16 89.4 53 83.0
A06p18650 Brassica napus HOM05D005373 ORTHO05D006617 1.0e-16 89.4 53 83.0
C08p24090 Brassica napus HOM05D005373 ORTHO05D006617 1.0e-16 89.4 53 83.0
BolC8t50030H Brassica oleracea HOM05D005373 ORTHO05D006617 1.0e-16 89.4 53 83.0
BraA06t24943Z Brassica rapa HOM05D005373 ORTHO05D006617 1.0e-16 89.4 53 83.0
CiPaw.02G033000 Carya illinoinensis HOM05D005373 ORTHO05D006617 1.0e-16 89.4 53 81.1
CiPaw.04G182700 Carya illinoinensis HOM05D005373 ORTHO05D006617 1.0e-16 89.4 53 81.1
Phvul.008G134200 Phaseolus vulgaris HOM05D005373 ORTHO05D006617 1.0e-16 89.4 53 81.1
Hund17126 Selenicereus undatus HOM05D005373 ORTHO05D006617 1.0e-16 89.4 53 83.0
Sc02g0003290 Simmondsia chinensis HOM05D005373 ORTHO05D006617 1.0e-16 89.4 53 83.0
Cc01_g18740 Coffea canephora HOM05D005373 ORTHO05D006617 1.3e-16 89.0 53 83.0
THA.LOC104821383 Tarenaya hassleriana HOM05D005373 ORTHO05D006617 1.3e-16 89.0 53 81.1
A06p28050 Brassica napus HOM05D005373 ORTHO05D006617 1.7e-16 88.6 53 81.1
BraA06t25747Z Brassica rapa HOM05D005373 ORTHO05D006617 1.7e-16 88.6 53 81.1
Lj5g0027817 Lotus japonicus HOM05D005373 ORTHO05D006617 1.7e-16 88.6 53 81.1
THA.LOC104818165 Tarenaya hassleriana HOM05D005373 ORTHO05D006617 1.7e-16 88.6 53 83.0
Atru.chr5.1594 Acer truncatum HOM05D005373 ORTHO05D006617 2.3e-16 88.2 53 79.2
BcaB01g00749 Brassica carinata HOM05D005373 ORTHO05D006617 2.3e-16 88.2 53 81.1
BcaB02g09576 Brassica carinata HOM05D005373 ORTHO05D006617 2.3e-16 88.2 53 81.1
Lalb_Chr19g0125981 Lupinus albus HOM05D005373 ORTHO05D006617 2.3e-16 88.2 53 81.1
MD05G1204500 Malus domestica HOM05D005373 ORTHO05D006617 2.3e-16 88.2 53 81.1
MD10G1191500 Malus domestica HOM05D005373 ORTHO05D006617 2.3e-16 88.2 53 81.1
Oeu002282.1 Olea europaea HOM05D001069 ORTHO05D001549 2.3e-16 88.2 53 81.1
TAR365G0879 Trochodendron aralioides HOM05D005373 ORTHO05D006617 2.3e-16 88.2 53 81.1
CANSAT01G0877 Cannabis sativa HOM05D005373 ORTHO05D006617 3.0e-16 87.8 53 81.1
PGR102G1093 Punica granatum HOM05D005373 ORTHO05D006617 3.0e-16 87.8 53 81.1
Atru.chr2.3918 Acer truncatum HOM05D005373 ORTHO05D006617 5.0e-16 87.0 53 79.2
Aa31LG4G17560 Aethionema arabicum HOM05D005373 ORTHO05D006617 5.0e-16 87.0 54 83.3
DCAR_012520 Daucus carota HOM05D005373 ORTHO05D006617 5.0e-16 87.0 53 81.1
Glyma.10G032800 Glycine max HOM05D005373 ORTHO05D006617 5.0e-16 87.0 53 81.1
Aqoxy2G03557 Aquilegia oxysepala HOM05D005373 ORTHO05D006617 6.6e-16 86.7 53 79.2
Manes.01G200900 Manihot esculenta HOM05D005373 ORTHO05D006617 6.6e-16 86.7 53 79.2
Nn1g02594 Nelumbo nucifera HOM05D005373 ORTHO05D006617 6.6e-16 86.7 53 79.2
Prupe.8G230800 Prunus persica HOM05D005373 ORTHO05D006617 6.6e-16 86.7 53 77.4
TAR633G1352 Trochodendron aralioides HOM05D005373 ORTHO05D006617 6.6e-16 86.7 53 79.2
CANSAT11G1068 Cannabis sativa HOM05D005373 ORTHO05D006617 8.6e-16 86.3 53 79.2
PSO832G1599 Papaver somniferum HOM05D005373 ORTHO05D006617 8.6e-16 86.3 53 77.4
BcaC01g02388 Brassica carinata HOM05D005373 ORTHO05D006617 1.5e-15 85.5 53 79.2
BolC3t18839H Brassica oleracea HOM05D005373 ORTHO05D006617 1.5e-15 85.5 53 79.2
SalBow4G0280 Salvia bowleyana HOM05D005373 ORTHO05D006617 1.5e-15 85.5 53 79.2
Cpa.g.sc52.142 Carica papaya HOM05D005373 ORTHO05D006617 1.9e-15 85.1 53 75.5
Glyma.02G141101 Glycine max HOM05D005373 ORTHO05D006617 1.9e-15 85.1 53 81.1
Dinv34577 Davidia involucrata HOM05D005373 ORTHO05D006617 4.3e-15 84.0 53 81.1
Nitab4.5_0002310g0090 Nicotiana tabacum HOM05D005373 ORTHO05D006617 4.3e-15 84.0 53 79.2
Peaxi162Scf00700g00135 Petunia axillaris HOM05D005373 ORTHO05D006617 4.3e-15 84.0 53 79.2
Solyc12g099820.1 Solanum lycopersicum HOM05D005373 ORTHO05D006617 4.3e-15 84.0 53 79.2
Sopen12g034450 Solanum pennellii HOM05D005373 ORTHO05D006617 4.3e-15 84.0 53 79.2
PGSC0003DMG400004717 Solanum tuberosum HOM05D005373 ORTHO05D006617 4.3e-15 84.0 53 79.2
Gohir.D11G133500 Gossypium hirsutum HOM05D005373 ORTHO05D006617 5.6e-15 83.6 53 79.2
Gorai.007G142700 Gossypium raimondii HOM05D005373 ORTHO05D006617 5.6e-15 83.6 53 79.2
Potri.002G043600 Populus trichocarpa HOM05D005373 ORTHO05D006617 5.6e-15 83.6 53 77.4
vmacro11045 Vaccinium macrocarpon HOM05D005373 ORTHO05D006617 5.6e-15 83.6 53 79.2
C03p65820 Brassica napus HOM05D005373 ORTHO05D006617 7.3e-15 83.2 53 77.4
unitig_26.g10142 Utricularia gibba HOM05D005373 ORTHO05D006617 9.5e-15 82.8 53 77.4
ATR0665G560 Amborella trichopoda HOM05D005373 ORTHO05D006617 1.2e-14 82.4 53 75.5
Duzib138G0987 Durio zibethinus HOM05D005373 ORTHO05D006617 1.2e-14 82.4 54 79.6
CAN.G575.93 Capsicum annuum HOM05D005373 ORTHO05D006617 1.6e-14 82.0 53 79.2
HanXRQChr01g0005311 Helianthus annuus HOM05D005373 ORTHO05D006617 1.6e-14 82.0 53 79.2
HanXRQChr06g0164391 Helianthus annuus HOM05D005373 ORTHO05D006617 1.6e-14 82.0 53 79.2
MBI04_g39243_MAGBIO Magnolia biondii HOM05D005373 ORTHO05D006617 2.1e-14 81.6 53 71.7
TWI18G0681 Tripterygium wilfordii HOM05D005373 ORTHO05D006617 2.1e-14 81.6 53 75.5
ECA248G2609 Erigeron canadensis HOM05D005373 ORTHO05D006617 2.8e-14 81.3 53 79.2
Eucgr.B01502 Eucalyptus grandis HOM05D005373 ORTHO05D006617 3.6e-14 80.9 53 73.6
Lsat_1_v5_gn_5_186641 Lactuca sativa HOM05D005373 ORTHO05D006617 3.6e-14 80.9 53 79.2
TWI36G0734 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 3.6e-14 80.9 53 75.5
Migut.N02186 Erythranthe guttata HOM05D005373 ORTHO05D006617 4.7e-14 80.5 53 75.5
MSTRG.21508 Avicennia marina HOM05D005373 ORTHO05D006617 8.1e-14 79.7 53 75.5
Gohir.A11G127860 Gossypium hirsutum HOM05D005373 ORTHO05D006617 8.1e-14 79.7 53 77.4
Potri.005G219400 Populus trichocarpa HOM05D005373 ORTHO05D006617 8.1e-14 79.7 53 71.7
HPP92_008005 Vanilla planifolia HOM05D005373 ORTHO05D006617 8.1e-14 79.7 53 71.7
Zm00001eb281280 Zea mays HOM05D005373 ORTHO05D006617 1.4e-13 79.0 52 73.1
PSO063G5966 Papaver somniferum HOM05D005373 ORTHO05D006617 1.8e-13 78.6 53 75.5
Gohir.A10G156200 Gossypium hirsutum HOM05D005373 ORTHO05D006617 5.2e-13 77.0 51 78.4
Sabra02G0035300 Salix brachista HOM05D005373 ORTHO05D006617 6.8e-13 76.6 64 64.1
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 1.5e-12 75.5 53 75.5
Sed0007692 Sechium edule HOM05D005373 ORTHO05D006617 2.0e-12 75.1 47 76.6
CDE06G2230 Ceratophyllum demersum HOM05D005373 ORTHO05D006617 2.6e-12 74.7 53 71.7
Zm00001eb379840 Zea mays HOM05D005373 ORTHO05D006617 2.2e-11 71.6 53 67.9
AagrBONN_evm.TU.Sc2ySwM_344.4653 Anthoceros agrestis HOM05D005373 ORTHO05D006617 8.3e-11 69.7 53 62.3
Mapoly0042s0050 Marchantia polymorpha HOM05D005373 ORTHO05D006617 1.3e-08 62.4 53 58.5
Pp3c14_7880 Physcomitrium patens HOM05D005373 ORTHO05D006617 2.3e-08 61.6 53 54.7
Pp3c2_1790 Physcomitrium patens HOM05D005373 ORTHO05D006617 2.5e-07 58.2 53 52.8

Acer truncatum (2 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (4 genes)
Gossypium hirsutum (6 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (1 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings