Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031927 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.4e-147 526.2 257 100.0
CSS0035962 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 2.8e-143 511.9 257 97.7
Actinidia15622 Actinidia chinensis HOM05D005529 ORTHO05D006800 6.7e-129 464.2 257 87.9
CSS0023417 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.7e-127 459.5 257 86.8
Cc10_g06360 Coffea canephora HOM05D005529 ORTHO05D006800 3.7e-127 458.4 257 86.8
Medtr1g097380 Medicago truncatula HOM05D005529 ORTHO05D006800 2.0e-125 452.6 257 85.2
Solyc12g056770.3 Solanum lycopersicum HOM05D005529 ORTHO05D006800 3.5e-125 451.8 257 84.4
Sopen12g029450 Solanum pennellii HOM05D005529 ORTHO05D006800 3.5e-125 451.8 257 84.4
Sc26g0003120 Simmondsia chinensis HOM05D005529 ORTHO05D006800 4.5e-125 451.4 257 84.4
Psat6g189800 Pisum sativum HOM05D005529 ORTHO05D006800 5.9e-125 451.1 257 84.8
Lj4A706T78 Lonicera japonica HOM05D005529 ORTHO05D006800 7.7e-125 450.7 256 84.8
Glyma.20G171800 Glycine max HOM05D005529 ORTHO05D006800 1.0e-124 450.3 256 84.8
Lalb_Chr06g0161811 Lupinus albus HOM05D005529 ORTHO05D006800 1.0e-124 450.3 257 84.0
Glyma.10G219900 Glycine max HOM05D005529 ORTHO05D006800 1.3e-124 449.9 256 84.8
Thecc.08G196300 Theobroma cacao HOM05D005529 ORTHO05D006800 1.3e-124 449.9 257 84.8
Phvul.007G085400 Phaseolus vulgaris HOM05D005529 ORTHO05D006800 6.5e-124 447.6 257 84.0
Peaxi162Scf00160g01637 Petunia axillaris HOM05D005529 ORTHO05D006800 8.5e-124 447.2 257 84.0
Lj5g0011658 Lotus japonicus HOM05D005529 ORTHO05D006800 1.1e-123 446.8 257 84.0
arahy.Tifrunner.gnm1.ann1.MD2PB3 Arachis hypogaea HOM05D005529 ORTHO05D006800 1.9e-123 446.0 257 84.0
arahy.Tifrunner.gnm1.ann1.PZ5J07 Arachis hypogaea HOM05D005529 ORTHO05D006800 1.9e-123 446.0 257 84.0
GSVIVG01013675001 Vitis vinifera HOM05D005529 ORTHO05D006800 2.5e-123 445.7 257 84.8
Migut.C00162 Erythranthe guttata HOM05D005529 ORTHO05D006800 3.2e-123 445.3 256 83.2
Migut.O00737 Erythranthe guttata HOM05D005529 ORTHO05D006800 3.2e-123 445.3 256 83.2
PGR042G1245 Punica granatum HOM05D005529 ORTHO05D006800 3.2e-123 445.3 257 84.0
TPR.G23153 Trifolium pratense HOM05D005529 ORTHO05D006800 7.2e-123 444.1 257 83.3
VMungo0720G3143 Vigna mungo HOM05D005529 ORTHO05D006800 1.6e-122 443.0 257 84.0
Aqoxy6G00458 Aquilegia oxysepala HOM05D005529 ORTHO05D006800 2.1e-122 442.6 257 83.7
CiPaw.16G006900 Carya illinoinensis HOM05D005529 ORTHO05D006800 2.1e-122 442.6 255 83.1
CAN.G26.7 Capsicum annuum HOM05D005529 ORTHO05D006800 3.6e-122 441.8 257 82.9
COL.COLO4_05242 Corchorus olitorius HOM05D005529 ORTHO05D006800 4.7e-122 441.4 257 83.3
Eucgr.F02670 Eucalyptus grandis HOM05D005529 ORTHO05D006800 4.7e-122 441.4 257 82.5
QL02p036323 Quercus lobata HOM05D005529 ORTHO05D006800 6.1e-122 441.0 256 84.8
Cpa.g.sc26.128 Carica papaya HOM05D005529 ORTHO05D006800 1.4e-121 439.9 257 83.3
QL02p036742 Quercus lobata HOM05D005529 ORTHO05D006800 1.4e-121 439.9 256 84.4
CANSAT25G1808 Cannabis sativa HOM05D005529 ORTHO05D006800 1.8e-121 439.5 255 84.3
CiPaw.15G011100 Carya illinoinensis HOM05D005529 ORTHO05D006800 1.8e-121 439.5 255 83.5
Lalb_Chr21g0305631 Lupinus albus HOM05D005529 ORTHO05D006800 1.8e-121 439.5 257 82.5
CsaV3_6G004830 Cucumis sativus L. HOM05D005529 ORTHO05D006800 3.0e-121 438.7 257 82.9
DCAR_019977 Daucus carota HOM05D005529 ORTHO05D006800 3.0e-121 438.7 254 81.9
Ciclev10002214m.g Citrus clementina HOM05D005529 ORTHO05D006800 4.0e-121 438.3 256 84.0
Atru.chr13.1964 Acer truncatum HOM05D005529 ORTHO05D006800 5.2e-121 438.0 257 82.9
Manes.02G186100 Manihot esculenta HOM05D005529 ORTHO05D006800 2.0e-120 436.0 258 82.9
Ah.05g168410 Amaranthus hybridus HOM05D005529 ORTHO05D006800 5.7e-120 434.5 257 81.3
MSTRG.965 Avicennia marina HOM05D005529 ORTHO05D006800 5.7e-120 434.5 257 81.7
Prupe.8G045100 Prunus persica HOM05D005529 ORTHO05D006800 5.7e-120 434.5 257 82.9
THA.LOC104800098 Tarenaya hassleriana HOM05D005529 ORTHO05D006800 7.5e-120 434.1 257 80.5
MD05G1037000 Malus domestica HOM05D005529 ORTHO05D006800 9.7e-120 433.7 257 82.5
Haze_17835 Corylus avellana HOM05D005529 ORTHO05D006800 1.3e-119 433.3 257 82.9
Haze_17841 Corylus avellana HOM05D005529 ORTHO05D006800 1.3e-119 433.3 257 82.9
Potri.005G199600 Populus trichocarpa HOM05D005529 ORTHO05D006800 1.7e-119 433.0 254 83.1
Oeu027223.1 Olea europaea HOM05D005529 ORTHO05D006800 2.2e-119 432.6 257 82.1
Sed0025527 Sechium edule HOM05D005529 ORTHO05D006800 6.3e-119 431.0 257 80.9
AUR62032105 Chenopodium quinoa HOM05D005529 ORTHO05D006800 8.2e-119 430.6 271 78.2
HanXRQChr11g0320531 Helianthus annuus HOM05D005529 ORTHO05D006800 1.1e-118 430.3 257 82.1
Nitab4.5_0004541g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 1.8e-118 429.5 265 80.8
PGSC0003DMG400016963 Solanum tuberosum HOM05D005529 ORTHO05D006800 2.4e-118 429.1 300 71.7
AUR62034931 Chenopodium quinoa HOM05D005529 ORTHO05D006800 3.1e-118 428.7 271 77.9
RcHm_v2.0_Chr6g0273541 Rosa chinensis HOM05D005529 ORTHO05D006800 7.0e-118 427.6 257 81.3
Sabra05G0151800 Salix brachista HOM05D005529 ORTHO05D006800 9.1e-118 427.2 254 81.9
Sp5g26810 Schrenkiella parvula HOM05D005529 ORTHO05D006800 1.6e-117 426.4 257 79.8
SpUn0095_0040 Schrenkiella parvula HOM05D005529 ORTHO05D006800 1.6e-117 426.4 257 79.8
Thhalv10019028m.g Eutrema salsugineum HOM05D005529 ORTHO05D006800 2.0e-117 426.0 257 79.4
TWI34G1474 Tripterygium wilfordii HOM05D005529 ORTHO05D006800 2.0e-117 426.0 257 81.3
AL2G31360 Arabidopsis lyrata HOM05D005529 ORTHO05D006800 1.0e-116 423.7 257 78.6
Gohir.A05G247200 Gossypium hirsutum HOM05D005529 ORTHO05D006800 1.0e-116 423.7 257 81.3
Gohir.D05G248700 Gossypium hirsutum HOM05D005529 ORTHO05D006800 1.0e-116 423.7 257 81.3
Gorai.009G259800 Gossypium raimondii HOM05D005529 ORTHO05D006800 1.0e-116 423.7 257 81.3
BcaC08g46609 Brassica carinata HOM05D005529 ORTHO05D006800 1.3e-116 423.3 257 78.6
A07p37940 Brassica napus HOM05D005529 ORTHO05D006800 1.3e-116 423.3 257 78.6
C06p45850 Brassica napus HOM05D005529 ORTHO05D006800 1.3e-116 423.3 257 78.6
BolC6t39637H Brassica oleracea HOM05D005529 ORTHO05D006800 1.3e-116 423.3 257 78.6
BraA07t31359Z Brassica rapa HOM05D005529 ORTHO05D006800 1.3e-116 423.3 257 78.6
Manes.18G096400 Manihot esculenta HOM05D005529 ORTHO05D006800 1.3e-116 423.3 258 80.2
AT1G71790 Arabidopsis thaliana HOM05D005529 ORTHO05D006800 2.2e-116 422.5 257 78.6
Carub.0002s1855 Capsella rubella HOM05D005529 ORTHO05D006800 2.2e-116 422.5 257 78.2
Nn1g05167 Nelumbo nucifera HOM05D005529 ORTHO05D006800 5.0e-116 421.4 257 79.4
PSO675G2610 Papaver somniferum HOM05D005529 ORTHO05D006800 5.0e-116 421.4 256 80.1
PSO541G1243 Papaver somniferum HOM05D005529 ORTHO05D006800 2.5e-115 419.1 256 79.7
unitig_32.g11170 Utricularia gibba HOM05D005529 ORTHO05D006800 9.4e-115 417.2 257 79.0
SGA_v2.0_scaffold161G37858 Striga asiatica HOM05D005529 ORTHO05D006800 1.2e-114 416.8 263 78.7
ECA232G2783 Erigeron canadensis HOM05D005529 ORTHO05D006800 2.7e-114 415.6 257 77.8
FvH4_2g12750 Fragaria vesca HOM05D005529 ORTHO05D006800 8.0e-114 414.1 257 78.6
FAN15G0152 Fragaria x ananassa HOM05D005529 ORTHO05D006800 8.0e-114 414.1 257 78.6
FAN27G2439 Fragaria x ananassa HOM05D005529 ORTHO05D006800 8.0e-114 414.1 257 78.6
ECA247G3042 Erigeron canadensis HOM05D005529 ORTHO05D006800 1.8e-113 412.9 255 78.8
Aa31LG4G8850 Aethionema arabicum HOM05D005529 ORTHO05D006800 3.0e-113 412.1 257 77.0
FAN24G1078 Fragaria x ananassa HOM05D005529 ORTHO05D006800 8.8e-113 410.6 257 78.2
Dinv41017 Davidia involucrata HOM05D005529 ORTHO05D006800 2.6e-112 409.1 230 87.0
ClCG08G007150 Citrullus lanatus HOM05D005529 ORTHO05D006800 3.7e-111 405.2 257 77.4
CDE04G0217 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 4.1e-110 401.7 257 75.9
Lsat_1_v5_gn_1_5401 Lactuca sativa HOM05D005529 ORTHO05D006800 1.6e-109 399.8 254 78.0
Lsat_1_v5_gn_9_42620 Lactuca sativa HOM05D005529 ORTHO05D006800 1.6e-109 399.8 253 77.5
Cfa018254 Carpinus fangiana HOM05D005529 ORTHO05D006800 1.5e-107 393.3 257 76.7
vmacro21201 Vaccinium macrocarpon HOM05D005529 ORTHO05D006800 2.1e-106 389.4 214 86.9
TAR381G0607 Trochodendron aralioides HOM05D005529 ORTHO05D006800 3.6e-106 388.7 281 72.2
Os03g0381200 Oryza sativa ssp. japonica HOM05D005529 ORTHO05D006800 2.6e-104 382.5 257 73.2
Hma1.2p1_0358F.1_g134920 Hydrangea macrophylla HOM05D005529 ORTHO05D006800 1.8e-102 376.3 214 84.1
Nn5g28882 Nelumbo nucifera HOM05D005529 ORTHO05D006800 9.2e-102 374.0 250 72.8
MELO3C019956.2 Cucumis melo HOM05D005529 ORTHO05D006800 1.1e-99 367.1 257 73.5
Duzib093G1833 Durio zibethinus HOM05D005529 ORTHO05D006800 2.5e-99 365.9 257 72.8
Nitab4.5_0004295g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 4.0e-97 358.6 223 78.9
ATR0564G028 Amborella trichopoda HOM05D005529 ORTHO05D006800 1.5e-96 356.7 231 74.0
Lj7C387G8 Lonicera japonica HOM05D005529 ORTHO05D006800 2.6e-96 355.9 256 69.1
TAR625G0192 Trochodendron aralioides HOM05D005529 ORTHO05D006800 2.3e-89 332.8 198 81.3
Pp3c1_32040 Physcomitrium patens HOM05D005529 ORTHO05D006800 6.4e-87 324.7 251 64.9
Mapoly0006s0028 Marchantia polymorpha HOM05D005529 ORTHO05D006800 8.3e-87 324.3 247 66.0
SMO141G0273 Selaginella moellendorffii HOM05D005529 ORTHO05D006800 4.1e-86 322.0 250 64.0
CDE07G0226 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 8.6e-84 314.3 203 74.4
AagrBONN_evm.TU.Sc2ySwM_228.4378 Anthoceros agrestis HOM05D005529 ORTHO05D006800 2.8e-82 309.3 251 63.7
MD10G1039400 Malus domestica HOM05D005529 ORTHO05D006800 2.2e-71 273.1 159 81.1
Zm00001eb018520 Zea mays HOM05D005529 ORTHO05D006800 6.0e-69 265.0 170 74.7
CARHR290990 Cardamine hirsuta HOM05D005529 ORTHO05D006800 2.8e-66 256.1 153 78.4
Dinv13098 Davidia involucrata HOM05D005529 ORTHO05D006800 1.2e-64 250.8 132 90.2
Ca_10643_v3 Cicer arietinum L. HOM05D005529 ORTHO05D006800 1.0e-60 237.7 142 79.6
PRCOL_00004850 Prasinoderma coloniale HOM05D005529 ORTHO05D006800 3.0e-60 236.1 254 50.8
CSS0032133 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.5e-59 233.8 116 90.5
Haze_27340 Corylus avellana HOM05D005529 ORTHO05D006800 6.2e-58 228.4 247 47.8
Actinidia02780 Actinidia chinensis HOM05D005529 ORTHO05D006800 1.9e-54 216.9 112 92.9
Glyma.06G212500 Glycine max HOM05D005529 ORTHO05D006800 1.8e-52 210.3 130 79.2
MD10G1040900 Malus domestica HOM05D005529 ORTHO05D006800 2.3e-52 209.9 198 58.6
Cfa022509 Carpinus fangiana HOM05D005529 ORTHO05D006800 1.2e-48 197.6 272 41.5
Glyma.20G171766 Glycine max HOM05D005529 ORTHO05D006800 7.6e-48 194.9 105 88.6
Lsat_1_v5_gn_8_71180 Lactuca sativa HOM05D005529 ORTHO05D006800 1.7e-47 193.7 156 63.5
Rhsim06G0089200 Rhododendron simsii HOM05D005529 ORTHO05D006800 2.9e-47 193.0 105 88.6
Glyma.09G074800 Glycine max HOM05D005529 ORTHO05D006800 1.6e-45 187.2 114 80.7
AUR62022308 Chenopodium quinoa HOM05D005529 ORTHO05D006800 1.9e-43 180.3 257 44.7
HPP92_020840 Vanilla planifolia HOM05D005529 ORTHO05D006800 3.7e-42 176.0 105 81.9
BcaC08g46606 Brassica carinata HOM05D005529 ORTHO05D006800 1.8e-41 173.7 105 79.0
Glyma.04G140500 Glycine max HOM05D005529 ORTHO05D006800 1.3e-39 167.5 104 81.7
Lsat_1_v5_gn_3_73520 Lactuca sativa HOM05D005529 ORTHO05D006800 1.1e-33 147.9 91 74.7
Actinidia17753 Actinidia chinensis HOM05D005529 ORTHO05D006800 1.5e-32 144.1 117 64.1
SalBow7G1408 Salvia bowleyana HOM05D005529 ORTHO05D006800 2.2e-26 123.6 67 89.6
HPP92_020745 Vanilla planifolia HOM05D005529 ORTHO05D006800 4.1e-25 119.4 96 64.6
HPP92_020744 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.0e-23 114.8 102 58.8
MD10G1041000 Malus domestica HOM05D005529 ORTHO05D006800 4.4e-19 99.4 60 80.0
Glyma.16G101900 Glycine max HOM05D005529 ORTHO05D006800 3.2e-14 83.2 60 70.0
HPP92_020839 Vanilla planifolia HOM05D005529 ORTHO05D006800 7.2e-14 82.0 55 74.5
VMungo0464G1177 Vigna mungo HOM05D005529 ORTHO05D006800 1.2e-08 64.7 40 80.0

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (0 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (3 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (7 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (4 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (0 genes)
Malus domestica (4 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (2 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (4 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings