Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031880 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 1.9e-187 659.1 334 100.0
CSS0044270 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 3.6e-183 644.8 334 97.9
Rhsim07G0047700 Rhododendron simsii HOM05D006927 ORTHO05D009065 2.9e-148 528.9 355 74.4
Dinv43961 Davidia involucrata HOM05D006927 ORTHO05D009065 6.5e-140 501.1 334 73.1
vmacro13598 Vaccinium macrocarpon HOM05D006927 ORTHO05D009065 4.8e-135 485.0 437 58.8
Gohir.A11G224222 Gossypium hirsutum HOM05D006927 ORTHO05D009065 3.1e-134 482.3 289 76.8
GSVIVG01019324001 Vitis vinifera HOM05D006927 ORTHO05D009065 5.3e-134 481.5 285 78.2
Gorai.007G250200 Gossypium raimondii HOM05D006927 ORTHO05D009065 2.0e-133 479.6 286 76.9
Potri.013G070700 Populus trichocarpa HOM05D006927 ORTHO05D009065 5.8e-133 478.0 290 76.6
Thecc.05G234500 Theobroma cacao HOM05D006927 ORTHO05D009065 2.9e-132 475.7 283 77.7
Duzib177G0162 Durio zibethinus HOM05D006927 ORTHO05D009065 4.2e-131 471.9 289 75.1
Manes.09G133500 Manihot esculenta HOM05D006927 ORTHO05D009065 5.5e-131 471.5 281 77.9
FvH4_7g08340 Fragaria vesca HOM05D006927 ORTHO05D009065 1.6e-130 469.9 283 75.3
Migut.B01420 Erythranthe guttata HOM05D006927 ORTHO05D009065 4.6e-130 468.4 325 68.9
FAN03G0521 Fragaria x ananassa HOM05D006927 ORTHO05D009065 6.1e-130 468.0 283 74.9
Prupe.2G106800 Prunus persica HOM05D006927 ORTHO05D009065 7.9e-130 467.6 286 74.8
RcHm_v2.0_Chr1g0340711 Rosa chinensis HOM05D006927 ORTHO05D009065 7.9e-130 467.6 283 74.9
Cpa.g.sc73.27 Carica papaya HOM05D006927 ORTHO05D009065 1.3e-129 466.8 280 76.8
Solyc01g081480.3 Solanum lycopersicum HOM05D006927 ORTHO05D009065 3.0e-129 465.7 286 76.6
Cc02_g26470 Coffea canephora HOM05D006927 ORTHO05D009065 6.7e-129 464.5 280 76.1
Sopen01g033040 Solanum pennellii HOM05D006927 ORTHO05D009065 8.7e-129 464.2 286 76.2
PGSC0003DMG400031110 Solanum tuberosum HOM05D006927 ORTHO05D009065 8.7e-129 464.2 286 75.9
Ciclev10032190m.g Citrus clementina HOM05D006927 ORTHO05D009065 1.9e-128 463.0 291 75.9
QL04p053394 Quercus lobata HOM05D006927 ORTHO05D009065 1.9e-128 463.0 284 77.8
Nitab4.5_0006785g0060 Nicotiana tabacum HOM05D006927 ORTHO05D009065 3.3e-128 462.2 338 68.6
Eucgr.D01080 Eucalyptus grandis HOM05D006927 ORTHO05D009065 4.3e-128 461.8 279 76.7
Lsat_1_v5_gn_1_89341 Lactuca sativa HOM05D006927 ORTHO05D009065 4.3e-128 461.8 336 68.2
SalBow5G1207 Salvia bowleyana HOM05D006927 ORTHO05D009065 9.7e-128 460.7 334 68.6
DCAR_001906 Daucus carota HOM05D006927 ORTHO05D009065 1.3e-127 460.3 333 68.2
Nitab4.5_0000792g0130 Nicotiana tabacum HOM05D006927 ORTHO05D009065 2.8e-127 459.1 286 75.5
FAN10G1940 Fragaria x ananassa HOM05D006927 ORTHO05D009065 3.7e-127 458.8 291 72.2
FAN06G3009 Fragaria x ananassa HOM05D006927 ORTHO05D009065 1.1e-126 457.2 301 70.4
Lj9A617T58 Lonicera japonica HOM05D006927 ORTHO05D009065 1.4e-126 456.8 274 76.6
ECA248G1152 Erigeron canadensis HOM05D006927 ORTHO05D009065 2.0e-125 453.0 283 76.0
PGR083G0610 Punica granatum HOM05D006927 ORTHO05D009065 2.6e-125 452.6 288 73.6
Peaxi162Scf00907g00025 Petunia axillaris HOM05D006927 ORTHO05D009065 7.7e-125 451.1 289 74.0
Aqoxy1G00986 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 3.8e-124 448.7 303 70.0
TAR629G3441 Trochodendron aralioides HOM05D006927 ORTHO05D009065 3.8e-124 448.7 277 75.8
AL6G28760 Arabidopsis lyrata HOM05D006927 ORTHO05D009065 6.5e-124 448.0 290 71.7
TWI34G1327 Tripterygium wilfordii HOM05D006927 ORTHO05D009065 1.4e-123 446.8 281 74.4
CAN.G992.25 Capsicum annuum HOM05D006927 ORTHO05D009065 1.9e-123 446.4 316 67.4
Sed0018978 Sechium edule HOM05D006927 ORTHO05D009065 4.2e-123 445.3 283 74.2
HanXRQChr01g0018481 Helianthus annuus HOM05D006927 ORTHO05D009065 5.5e-123 444.9 291 72.5
AT5G17670 Arabidopsis thaliana HOM05D006927 ORTHO05D009065 7.2e-123 444.5 284 72.5
Atru.chr2.1634 Acer truncatum HOM05D006927 ORTHO05D009065 1.6e-122 443.4 312 67.6
MD07G1081500 Malus domestica HOM05D006927 ORTHO05D009065 1.6e-122 443.4 276 74.6
MELO3C022480.2 Cucumis melo HOM05D006927 ORTHO05D009065 2.1e-122 443.0 282 73.4
Carub.0006s1591 Capsella rubella HOM05D006927 ORTHO05D009065 4.6e-122 441.8 288 72.6
CsaV3_6G006390 Cucumis sativus L. HOM05D006927 ORTHO05D009065 4.6e-122 441.8 282 73.4
Haze_15787 Corylus avellana HOM05D006927 ORTHO05D009065 3.9e-121 438.7 290 73.1
Sp6g26550 Schrenkiella parvula HOM05D006927 ORTHO05D009065 1.1e-120 437.2 285 72.6
THA.LOC104820815 Tarenaya hassleriana HOM05D006927 ORTHO05D009065 3.3e-120 435.6 285 72.3
BcaC03g13532 Brassica carinata HOM05D006927 ORTHO05D009065 7.4e-120 434.5 281 72.2
Lj1g0006598 Lotus japonicus HOM05D006927 ORTHO05D009065 3.7e-119 432.2 281 72.2
Thhalv10014137m.g Eutrema salsugineum HOM05D006927 ORTHO05D009065 8.2e-119 431.0 285 71.9
A02p04400 Brassica napus HOM05D006927 ORTHO05D009065 5.3e-118 428.3 287 70.0
C02p09230 Brassica napus HOM05D006927 ORTHO05D009065 9.1e-118 427.6 285 70.9
VMungo0251G3349 Vigna mungo HOM05D006927 ORTHO05D009065 2.6e-117 426.0 284 71.1
Sc11g0005590 Simmondsia chinensis HOM05D006927 ORTHO05D009065 3.4e-117 425.6 290 68.3
Medtr3g118320 Medicago truncatula HOM05D006927 ORTHO05D009065 1.3e-116 423.7 293 70.0
Os02g0129900 Oryza sativa ssp. japonica HOM05D006927 ORTHO05D009065 2.2e-116 422.9 283 70.3
MBI04_g06278_MAGBIO Magnolia biondii HOM05D006927 ORTHO05D009065 5.0e-116 421.8 275 70.5
PSO675G5316 Papaver somniferum HOM05D006927 ORTHO05D009065 5.0e-116 421.8 301 66.8
Phvul.002G317100 Phaseolus vulgaris HOM05D006927 ORTHO05D009065 5.5e-115 418.3 284 69.0
Ah.16g104050 Amaranthus hybridus HOM05D006927 ORTHO05D009065 1.6e-114 416.8 341 62.2
COL.COLO4_21417 Corchorus olitorius HOM05D006927 ORTHO05D009065 3.6e-114 415.6 287 70.0
arahy.Tifrunner.gnm1.ann1.DTN3WJ Arachis hypogaea HOM05D006927 ORTHO05D009065 4.7e-114 415.2 288 70.1
CANSAT25G2771 Cannabis sativa HOM05D006927 ORTHO05D009065 6.1e-114 414.8 282 68.8
ATR0568G108 Amborella trichopoda HOM05D006927 ORTHO05D009065 1.8e-113 413.3 282 68.1
TPR.G38566 Trifolium pratense HOM05D006927 ORTHO05D009065 2.3e-113 412.9 330 63.0
Zm00001eb208940 Zea mays HOM05D006927 ORTHO05D009065 3.0e-113 412.5 286 68.9
Aa31LG11G11960 Aethionema arabicum HOM05D006927 ORTHO05D009065 3.3e-112 409.1 318 64.2
arahy.Tifrunner.gnm1.ann1.A7PVHI Arachis hypogaea HOM05D006927 ORTHO05D009065 3.3e-112 409.1 288 69.4
Glyma.06G001500 Glycine max HOM05D006927 ORTHO05D009065 4.4e-112 408.7 291 67.7
ClCG06G000620 Citrullus lanatus HOM05D006927 ORTHO05D009065 1.3e-111 407.1 309 65.0
SGA_v2.0_scaffold98G29375 Striga asiatica HOM05D006927 ORTHO05D009065 9.1e-110 401.0 277 69.7
Ca_15418_v3 Cicer arietinum L. HOM05D006927 ORTHO05D009065 2.0e-109 399.8 277 70.8
FAN01G0804 Fragaria x ananassa HOM05D006927 ORTHO05D009065 2.6e-104 382.9 277 65.7
Lalb_Chr08g0246751 Lupinus albus HOM05D006927 ORTHO05D009065 3.1e-102 375.9 288 62.2
Sabra13G0061600 Salix brachista HOM05D006927 ORTHO05D009065 8.5e-100 367.9 323 59.4
Mapoly0110s0034 Marchantia polymorpha HOM05D006927 ORTHO05D009065 3.0e-97 359.4 292 58.2
AagrBONN_evm.TU.Sc2ySwM_228.4179 Anthoceros agrestis HOM05D006927 ORTHO05D009065 2.6e-96 356.3 299 55.5
CDE02G0279 Ceratophyllum demersum HOM05D006927 ORTHO05D009065 3.4e-96 355.9 289 58.5
MD02G1231900 Malus domestica HOM05D006927 ORTHO05D009065 1.8e-94 350.1 249 67.9
Pp3c20_10810 Physcomitrium patens HOM05D006927 ORTHO05D009065 1.6e-93 347.1 301 54.2
SMO141G0137 Selaginella moellendorffii HOM05D006927 ORTHO05D009065 1.1e-86 324.3 275 56.7
Actinidia31733 Actinidia chinensis HOM05D006927 ORTHO05D009065 8.6e-84 314.7 180 83.9
Psat5g000960 Pisum sativum HOM05D006927 ORTHO05D009065 3.6e-82 309.3 224 67.9
Dinv43521 Davidia involucrata HOM05D006927 ORTHO05D009065 3.0e-81 306.2 171 82.5
Oeu034881.1 Olea europaea HOM05D006927 ORTHO05D009065 3.2e-78 296.2 214 66.8
Nn1g09344 Nelumbo nucifera HOM05D006927 ORTHO05D009065 3.5e-77 292.7 217 65.0
CiPaw.02G047300 Carya illinoinensis HOM05D006927 ORTHO05D009065 5.6e-75 285.4 167 80.2
BolC2t06832H Brassica oleracea HOM05D006927 ORTHO05D009065 2.0e-72 276.9 162 78.4
BraA02t05404Z Brassica rapa HOM05D006927 ORTHO05D009065 2.0e-72 276.9 162 78.4
Aqoxy116s007 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 6.6e-68 261.9 271 52.4
MCO09G674 Micromonas commoda HOM05D006927 ORTHO05D009065 9.5e-67 258.1 279 44.8
HPP92_025548 Vanilla planifolia HOM05D006927 ORTHO05D009065 1.4e-65 254.2 179 65.4
Cre07.g313550 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D009065 2.9e-63 246.5 283 41.7
PRCOL_00002784 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 1.6e-61 240.7 290 43.8
CARHR195510 Cardamine hirsuta HOM05D006927 ORTHO05D009065 2.3e-57 226.9 163 66.3
Gohir.D11G237100 Gossypium hirsutum HOM05D006927 ORTHO05D009065 3.5e-53 213.0 122 78.7
unitig_26.g8847 Utricularia gibba HOM05D006927 ORTHO05D009065 4.3e-51 206.1 170 60.6
unitig_26.g8846 Utricularia gibba HOM05D006927 ORTHO05D009065 1.9e-35 154.1 73 86.3
PRCOL_00000683 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 4.0e-33 146.4 283 35.0
Actinidia34774 Actinidia chinensis HOM05D006927 ORTHO05D009065 3.8e-31 139.8 81 74.1
MCO02G275 Micromonas commoda HOM05D006927 ORTHO05D044296 6.4e-31 139.0 323 30.7
Cre01.g025150 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D044296 7.9e-29 132.1 335 28.4
Thecc.05G234900 Theobroma cacao HOM05D006927 ORTHO05D009065 5.1e-28 129.4 60 93.3
SEGI_38351 Sequoiadendron giganteum HOM05D006927 ORTHO05D009065 1.3e-23 114.8 78 64.1
HPP92_025520 Vanilla planifolia HOM05D006927 ORTHO05D009065 7.1e-22 109.0 155 43.9
BcaB08g36753 Brassica carinata HOM05D006927 ORTHO05D009065 6.0e-21 105.9 136 44.9
AagrBONN_evm.TU.Sc2ySwM_368.1936 Anthoceros agrestis HOM05D006927 ORTHO05D071668 3.9e-12 76.6 262 24.4
CBR_g4745 Chara braunii HOM05D000019 ORTHO05D000002 3.3e-11 73.6 68 47.1
PRCOL_00002844 Prasinoderma coloniale HOM05D006927 ORTHO05D049054 3.7e-10 70.1 131 34.4
MCO12G090 Micromonas commoda HOM05D006927 ORTHO05D049054 3.1e-09 67.0 335 23.9
Actinidia31734 Actinidia chinensis HOM05D006927 ORTHO05D056651 6.9e-09 65.9 113 46.9
C09p59490 Brassica napus HOM05D000005 ORTHO05D040849 4.5e-08 63.2 160 31.2

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (2 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (2 genes)
Brassica napus (3 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (2 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (3 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (3 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (2 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings