Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031856 Camellia sinensis var. sinensis HOM05D004898 ORTHO05D005574 3.8e-224 781.2 398 100.0
CSS0045138 Camellia sinensis var. sinensis HOM05D004898 ORTHO05D005574 3.8e-224 781.2 398 100.0
Rhsim13G0144800 Rhododendron simsii HOM05D004898 ORTHO05D005574 7.6e-188 660.6 396 82.1
Actinidia39792 Actinidia chinensis HOM05D004898 ORTHO05D005574 4.2e-186 654.8 397 80.6
vmacro03635 Vaccinium macrocarpon HOM05D004898 ORTHO05D005574 6.9e-181 637.5 397 78.8
Cc09_g00800 Coffea canephora HOM05D004898 ORTHO05D005574 1.5e-175 619.8 387 78.8
QL05p069311 Quercus lobata HOM05D004898 ORTHO05D005574 1.9e-175 619.4 386 79.3
Sabra06G0009800 Salix brachista HOM05D004898 ORTHO05D005574 1.3e-174 616.7 386 79.3
Oeu052872.1 Olea europaea HOM05D004898 ORTHO05D005574 2.4e-173 612.5 389 78.7
Potri.006G013900 Populus trichocarpa HOM05D004898 ORTHO05D005574 3.1e-173 612.1 386 78.8
Eucgr.E03924 Eucalyptus grandis HOM05D004898 ORTHO05D005574 9.0e-173 610.5 386 78.5
RcHm_v2.0_Chr5g0001371 Rosa chinensis HOM05D004898 ORTHO05D005574 9.0e-173 610.5 386 78.2
Dinv07411 Davidia involucrata HOM05D004898 ORTHO05D005574 1.2e-172 610.1 386 78.0
FvH4_3g00891 Fragaria vesca HOM05D004898 ORTHO05D005574 2.6e-172 609.0 386 78.8
FAN21G2703 Fragaria x ananassa HOM05D004898 ORTHO05D005574 3.8e-171 605.1 386 78.8
Manes.08G069675 Manihot esculenta HOM05D004898 ORTHO05D005574 6.4e-171 604.4 387 77.3
GSVIVG01003326001 Vitis vinifera HOM05D004898 ORTHO05D005574 8.4e-171 604.0 386 78.0
GSVIVG01006080001 Vitis vinifera HOM05D004898 ORTHO05D005574 8.4e-171 604.0 386 78.0
Prupe.4G009500 Prunus persica HOM05D004898 ORTHO05D005574 1.4e-170 603.2 386 78.0
Solyc11g012360.2 Solanum lycopersicum HOM05D004898 ORTHO05D005574 1.9e-170 602.8 396 74.5
MD05G1358600 Malus domestica HOM05D004898 ORTHO05D005574 4.2e-170 601.7 383 78.3
PGSC0003DMG400013282 Solanum tuberosum HOM05D004898 ORTHO05D005574 5.5e-170 601.3 396 74.5
Cfa000089 Carpinus fangiana HOM05D004898 ORTHO05D005574 9.3e-170 600.5 387 74.9
Cfa000090 Carpinus fangiana HOM05D004898 ORTHO05D005574 9.3e-170 600.5 387 76.0
Actinidia34018 Actinidia chinensis HOM05D004898 ORTHO05D005574 2.1e-169 599.4 393 77.1
CAN.G1186.45 Capsicum annuum HOM05D004898 ORTHO05D005574 2.1e-169 599.4 393 75.1
Sopen11g007110 Solanum pennellii HOM05D004898 ORTHO05D005574 2.1e-169 599.4 396 74.2
FvH4_3g00890 Fragaria vesca HOM05D004898 ORTHO05D005574 7.9e-169 597.4 386 75.4
Ciclev10014770m.g Citrus clementina HOM05D004898 ORTHO05D005574 1.3e-168 596.7 386 76.4
CiPaw.09G103400 Carya illinoinensis HOM05D004898 ORTHO05D005574 3.9e-168 595.1 387 76.0
RcHm_v2.0_Chr5g0001361 Rosa chinensis HOM05D004898 ORTHO05D005574 3.9e-168 595.1 386 74.6
Aqoxy4G02191 Aquilegia oxysepala HOM05D004898 ORTHO05D005574 8.7e-168 594.0 383 76.8
FAN21G0575 Fragaria x ananassa HOM05D004898 ORTHO05D005574 1.1e-167 593.6 386 74.6
TWI38G1092 Tripterygium wilfordii HOM05D004898 ORTHO05D005574 1.1e-167 593.6 380 77.4
MD10G1333000 Malus domestica HOM05D004898 ORTHO05D005574 4.3e-167 591.7 386 74.9
Nn1g03284 Nelumbo nucifera HOM05D004898 ORTHO05D005574 5.6e-167 591.3 379 78.1
Peaxi162Scf00352g00047 Petunia axillaris HOM05D004898 ORTHO05D005574 5.6e-167 591.3 370 77.6
Prupe.4G009400 Prunus persica HOM05D004898 ORTHO05D005574 1.6e-166 589.7 395 72.9
Thecc.06G234600 Theobroma cacao HOM05D004898 ORTHO05D005574 2.1e-166 589.3 382 77.0
ECA240G2526 Erigeron canadensis HOM05D004898 ORTHO05D005574 2.4e-165 585.9 381 76.6
HanXRQChr05g0129101 Helianthus annuus HOM05D004898 ORTHO05D005574 2.4e-165 585.9 377 77.5
Atru.chr1.2413_Atru.chr1.2414 Acer truncatum HOM05D004898 ORTHO05D005574 4.0e-165 585.1 386 74.4
Lj1A1241T64 Lonicera japonica HOM05D004898 ORTHO05D005574 4.0e-165 585.1 380 77.6
Haze_06951 Corylus avellana HOM05D004898 ORTHO05D005574 9.0e-165 583.9 393 73.5
Lsat_1_v5_gn_7_13740 Lactuca sativa HOM05D004898 ORTHO05D005574 2.6e-164 582.4 379 76.8
Duzib160G0749 Durio zibethinus HOM05D004898 ORTHO05D005574 2.9e-163 578.9 385 74.5
PSO541G1832 Papaver somniferum HOM05D004898 ORTHO05D005574 2.9e-163 578.9 383 74.7
EL10Ac8g20211 Beta vulgaris HOM05D004898 ORTHO05D005574 3.8e-163 578.6 387 73.1
MBI19_g06154_MAGBIO Magnolia biondii HOM05D004898 ORTHO05D005574 1.1e-162 577.0 386 72.5
PSO675G0622 Papaver somniferum HOM05D004898 ORTHO05D005574 1.4e-162 576.6 383 74.9
CANSAT56G0760 Cannabis sativa HOM05D004898 ORTHO05D005574 1.2e-161 573.5 386 72.3
DCAR_030865 Daucus carota HOM05D004898 ORTHO05D005574 2.7e-161 572.4 376 74.7
FAN25G1838 Fragaria x ananassa HOM05D004898 ORTHO05D005574 6.1e-161 571.2 382 75.9
SGA_v2.0_scaffold7G03752 Striga asiatica HOM05D004898 ORTHO05D005574 1.0e-160 570.5 378 75.1
Hund23404 Selenicereus undatus HOM05D004898 ORTHO05D005574 1.8e-160 569.7 389 72.8
AUR62012806 Chenopodium quinoa HOM05D004898 ORTHO05D005574 2.3e-160 569.3 376 73.4
ClCG01G010280 Citrullus lanatus HOM05D004898 ORTHO05D005574 3.9e-160 568.5 383 72.3
Gohir.D06G160500 Gossypium hirsutum HOM05D004898 ORTHO05D005574 3.3e-159 565.5 379 72.6
HPP92_022800 Vanilla planifolia HOM05D004898 ORTHO05D005574 4.3e-159 565.1 382 71.7
CsaV3_1G017190 Cucumis sativus L. HOM05D004898 ORTHO05D005574 7.4e-159 564.3 384 70.8
Sed0020280 Sechium edule HOM05D004898 ORTHO05D005574 9.7e-159 563.9 383 71.3
Gohir.A06G153700 Gossypium hirsutum HOM05D004898 ORTHO05D005574 1.6e-158 563.1 379 72.3
BcaC03g16972 Brassica carinata HOM05D004898 ORTHO05D005574 2.8e-158 562.4 382 73.6
C02p48760 Brassica napus HOM05D004898 ORTHO05D005574 2.8e-158 562.4 382 73.6
BolC2t10970H Brassica oleracea HOM05D004898 ORTHO05D005574 2.8e-158 562.4 382 73.6
Gohir.D10G008600 Gossypium hirsutum HOM05D004898 ORTHO05D005574 2.8e-158 562.4 385 72.2
MELO3C025563.2 Cucumis melo HOM05D004898 ORTHO05D005574 3.7e-158 562.0 384 70.3
Gorai.010G187200 Gossypium raimondii HOM05D004898 ORTHO05D005574 3.7e-158 562.0 378 72.2
A02p31430 Brassica napus HOM05D004898 ORTHO05D005574 4.8e-158 561.6 382 73.8
Carub.0008s0022 Capsella rubella HOM05D004898 ORTHO05D005574 1.1e-157 560.5 383 73.4
Gohir.A10G008900 Gossypium hirsutum HOM05D004898 ORTHO05D005574 1.1e-157 560.5 385 72.5
Sp2g12290 Schrenkiella parvula HOM05D004898 ORTHO05D005574 1.1e-157 560.5 382 73.3
THA.LOC104806731 Tarenaya hassleriana HOM05D004898 ORTHO05D005574 1.4e-157 560.1 380 74.7
AL8G10410 Arabidopsis lyrata HOM05D004898 ORTHO05D005574 1.8e-157 559.7 383 72.8
AT5G47560 Arabidopsis thaliana HOM05D004898 ORTHO05D005574 3.1e-157 558.9 383 72.6
BraA02t08145Z Brassica rapa HOM05D004898 ORTHO05D005574 3.1e-157 558.9 380 73.4
A09p23110 Brassica napus HOM05D004898 ORTHO05D005574 9.0e-157 557.4 383 72.1
BcaC04g21615 Brassica carinata HOM05D004898 ORTHO05D005574 2.0e-156 556.2 383 71.8
C09p29850 Brassica napus HOM05D004898 ORTHO05D005574 2.0e-156 556.2 383 71.8
BolC9t55848H Brassica oleracea HOM05D004898 ORTHO05D005574 2.0e-156 556.2 383 71.8
CARHR173790 Cardamine hirsuta HOM05D004898 ORTHO05D005574 2.6e-156 555.8 382 72.8
Aa31LG9G5480 Aethionema arabicum HOM05D004898 ORTHO05D005574 4.5e-156 555.1 377 74.0
BraA09t37914Z Brassica rapa HOM05D004898 ORTHO05D005574 4.5e-156 555.1 383 71.8
Sc05g0009650 Simmondsia chinensis HOM05D004898 ORTHO05D005574 1.3e-155 553.5 384 71.9
Thhalv10000848m.g Eutrema salsugineum HOM05D004898 ORTHO05D005574 1.7e-155 553.1 384 72.4
A06p44970 Brassica napus HOM05D004898 ORTHO05D005574 3.8e-155 552.0 384 71.6
BcaC06g31373 Brassica carinata HOM05D004898 ORTHO05D005574 8.5e-155 550.8 384 71.4
BolC7t43662H Brassica oleracea HOM05D004898 ORTHO05D005574 2.5e-154 549.3 384 71.4
BraA06t27368Z Brassica rapa HOM05D004898 ORTHO05D005574 2.5e-154 549.3 383 71.3
C07p31210 Brassica napus HOM05D004898 ORTHO05D005574 9.4e-154 547.4 384 70.8
Nitab4.5_0000143g0160 Nicotiana tabacum HOM05D004898 ORTHO05D005574 1.1e-151 540.4 365 72.6
Glyma.09G010700 Glycine max HOM05D004898 ORTHO05D005574 3.3e-151 538.9 380 69.2
Phvul.006G142700 Phaseolus vulgaris HOM05D004898 ORTHO05D005574 4.3e-151 538.5 383 67.6
Lj4g0027564 Lotus japonicus HOM05D004898 ORTHO05D005574 5.7e-151 538.1 386 68.1
Glyma.15G115200 Glycine max HOM05D004898 ORTHO05D005574 3.7e-150 535.4 383 68.1
Gorai.011G009400 Gossypium raimondii HOM05D004898 ORTHO05D005574 4.8e-150 535.0 385 69.6
Medtr4g133230 Medicago truncatula HOM05D004898 ORTHO05D005574 4.8e-150 535.0 383 66.8
BcaC06g34240 Brassica carinata HOM05D004898 ORTHO05D005574 6.3e-150 534.6 368 72.0
PGR042G1052 Punica granatum HOM05D004898 ORTHO05D005574 8.2e-150 534.3 385 70.6
arahy.Tifrunner.gnm1.ann1.L2E3EJ Arachis hypogaea HOM05D004898 ORTHO05D005574 1.8e-149 533.1 383 67.6
Psat4g004680 Pisum sativum HOM05D004898 ORTHO05D005574 2.4e-149 532.7 386 65.8
arahy.Tifrunner.gnm1.ann1.GM6TB3 Arachis hypogaea HOM05D004898 ORTHO05D005574 3.1e-149 532.3 385 67.3
arahy.Tifrunner.gnm1.ann1.ZF0ICG Arachis hypogaea HOM05D004898 ORTHO05D005574 6.9e-149 531.2 385 67.0
arahy.Tifrunner.gnm1.ann1.5M9JPT Arachis hypogaea HOM05D004898 ORTHO05D005574 9.1e-149 530.8 383 67.4
unitig_748.g7600 Utricularia gibba HOM05D004898 ORTHO05D005574 9.1e-149 530.8 393 66.4
VMungo0540G1349 Vigna mungo HOM05D004898 ORTHO05D005574 1.2e-148 530.4 380 68.2
Ca_21041_v3 Cicer arietinum L. HOM05D004898 ORTHO05D005574 2.6e-148 529.3 380 66.6
Lj6g0016962 Lotus japonicus HOM05D004898 ORTHO05D005574 4.5e-148 528.5 383 67.1
Lalb_Chr18g0057021 Lupinus albus HOM05D004898 ORTHO05D005574 7.7e-148 527.7 382 67.0
MD10G1332900 Malus domestica HOM05D004898 ORTHO05D005574 5.0e-147 525.0 362 71.5
TPR.G5945 Trifolium pratense HOM05D004898 ORTHO05D005574 1.9e-146 523.1 378 66.7
Medtr2g026030 Medicago truncatula HOM05D004898 ORTHO05D005574 2.5e-146 522.7 383 66.3
COL.COLO4_31899 Corchorus olitorius HOM05D004898 ORTHO05D005574 2.7e-145 519.2 390 67.4
Os09g0484900 Oryza sativa ssp. japonica HOM05D004898 ORTHO05D005574 2.7e-145 519.2 394 63.7
Psat1g175640 Pisum sativum HOM05D004898 ORTHO05D005574 7.9e-145 517.7 383 65.0
Migut.M01405 Erythranthe guttata HOM05D004898 ORTHO05D005574 7.7e-140 501.1 324 75.6
Zm00001eb316570 Zea mays HOM05D004898 ORTHO05D005574 5.0e-139 498.4 390 62.3
Os08g0503700 Oryza sativa ssp. japonica HOM05D004898 ORTHO05D005574 2.1e-137 493.0 385 61.0
Zm00001eb158920 Zea mays HOM05D004898 ORTHO05D005574 4.4e-135 485.3 382 61.5
VMungo0540G0197 Vigna mungo HOM05D004898 ORTHO05D005574 3.8e-131 472.2 377 62.1
SEGI_04913 Sequoiadendron giganteum HOM05D004898 ORTHO05D005574 7.0e-125 451.4 326 67.5
Ca_00729_v3 Cicer arietinum L. HOM05D004898 ORTHO05D005574 2.9e-123 446.0 383 58.2
SalBow8G1501 Salvia bowleyana HOM05D004898 ORTHO05D005574 1.2e-119 434.1 288 73.3
TPR.G30453 Trifolium pratense HOM05D004898 ORTHO05D005574 1.0e-115 421.0 383 55.6
TPR.G30452 Trifolium pratense HOM05D004898 ORTHO05D005574 6.6e-107 391.7 385 53.8
SMO118G0209 Selaginella moellendorffii HOM05D004898 ORTHO05D005574 8.3e-102 374.8 390 48.5
SMO270G0136 Selaginella moellendorffii HOM05D004898 ORTHO05D005574 1.2e-97 360.9 378 46.6
AagrBONN_evm.TU.Sc2ySwM_117.1091 Anthoceros agrestis HOM05D004898 ORTHO05D005574 2.8e-97 359.8 406 46.3
Eucgr.L01902 Eucalyptus grandis HOM05D004898 ORTHO05D005574 5.2e-96 355.5 227 79.3
Pp3c15_15560 Physcomitrium patens HOM05D004898 ORTHO05D005574 1.7e-86 323.9 429 40.3
AUR62021848 Chenopodium quinoa HOM05D004898 ORTHO05D005574 2.3e-83 313.5 204 72.1
Mapoly0082s0008 Marchantia polymorpha HOM05D004898 ORTHO05D005574 2.8e-81 306.6 426 38.5
BcaC06g31368 Brassica carinata HOM05D004898 ORTHO05D005574 2.6e-71 273.5 193 67.9
Glyma.07G265900 Glycine max HOM05D004898 ORTHO05D005574 6.4e-62 242.3 180 69.4
BcaC06g31369 Brassica carinata HOM05D004898 ORTHO05D005574 6.9e-56 222.2 155 73.5
Glyma.09G010800 Glycine max HOM05D004898 ORTHO05D005574 1.4e-53 214.5 173 60.1
TPR.G39985 Trifolium pratense HOM05D004898 ORTHO05D005574 1.2e-44 184.9 157 58.6
Nitab4.5_0003626g0040 Nicotiana tabacum HOM05D004898 ORTHO05D005574 2.5e-37 160.6 108 70.4
CiPaw.02G047500 Carya illinoinensis HOM05D004898 ORTHO05D005574 1.8e-32 144.4 97 71.1
Oeu026504.1 Olea europaea HOM05D004898 ORTHO05D005574 1.1e-29 135.2 150 52.0
FAN22G1464 Fragaria x ananassa HOM05D004898 ORTHO05D005574 4.4e-18 96.7 50 84.0
TPR.G14633 Trifolium pratense HOM05D004898 ORTHO05D005574 8.2e-17 92.4 71 62.0
SEGI_30483 Sequoiadendron giganteum HOM05D004898 ORTHO05D005574 1.6e-07 61.6 45 62.2
Zm00001eb140760 Zea mays HOM05D004186 ORTHO05D003061 2.0e-07 61.2 46 58.7
Zm00001eb361420 Zea mays HOM05D032919 ORTHO05D005574 4.5e-07 60.1 50 52.0
Zm00001eb349350 Zea mays HOM05D004186 ORTHO05D006965 1.0e-06 58.9 46 54.3
VMungo1383G2427 Vigna mungo HOM05D035140 ORTHO05D005574 2.2e-06 57.8 49 57.1

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (6 genes)
Brassica napus (6 genes)
Brassica oleracea (3 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (4 genes)
Glycine max (4 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (3 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (2 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (5 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (3 genes)
Vitis vinifera (2 genes)
Zea mays (5 genes)

Program Settings