Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031315 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 0.0e+00 1267.3 663 100.0
CSS0037332 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 0.0e+00 1194.9 731 88.5
CSS0031564 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 6.7e-181 638.3 694 57.2
Rhsim03G0105700 Rhododendron simsii HOM05D005926 ORTHO05D007001 1.2e-169 600.9 686 55.8
Actinidia18581 Actinidia chinensis HOM05D005926 ORTHO05D007001 1.2e-166 590.9 704 52.7
CSS0015422 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 2.3e-165 586.6 748 51.7
vmacro07227 Vaccinium macrocarpon HOM05D005926 ORTHO05D007001 7.5e-164 581.6 684 55.4
Dinv30648 Davidia involucrata HOM05D005926 ORTHO05D007001 2.8e-155 553.1 765 49.7
Actinidia28534 Actinidia chinensis HOM05D005926 ORTHO05D007001 3.3e-143 513.1 746 46.1
QL04p042256 Quercus lobata HOM05D005926 ORTHO05D007001 4.7e-118 429.5 695 44.3
GSVIVG01034734001 Vitis vinifera HOM05D005926 ORTHO05D007001 8.1e-118 428.7 752 41.5
Ciclev10030805m.g Citrus clementina HOM05D005926 ORTHO05D007001 2.0e-116 424.1 675 45.8
TAR623G1319 Trochodendron aralioides HOM05D005926 ORTHO05D007001 1.0e-112 411.8 712 42.4
Manes.07G090100 Manihot esculenta HOM05D005926 ORTHO05D007001 1.5e-111 407.9 694 42.4
Atru.chr12.975 Acer truncatum HOM05D005926 ORTHO05D007001 4.3e-111 406.4 700 42.9
Lj2C28T9 Lonicera japonica HOM05D005926 ORTHO05D007001 9.3e-106 388.7 613 45.5
CANSAT56G4130 Cannabis sativa HOM05D005926 ORTHO05D007001 6.0e-105 386.0 695 41.3
RcHm_v2.0_Chr1g0333121 Rosa chinensis HOM05D005926 ORTHO05D007001 3.6e-102 376.7 572 46.2
FvH4_7g05860 Fragaria vesca HOM05D005926 ORTHO05D007001 3.1e-101 373.6 573 45.5
FAN10G2760 Fragaria x ananassa HOM05D005926 ORTHO05D007001 2.0e-100 370.9 592 44.6
MD02G1248000 Malus domestica HOM05D005926 ORTHO05D007001 4.5e-100 369.8 770 40.4
Duzib106G0448 Durio zibethinus HOM05D005926 ORTHO05D007001 7.6e-100 369.0 720 40.7
TWI63G0673 Tripterygium wilfordii HOM05D005926 ORTHO05D007001 2.9e-99 367.1 694 42.1
FAN03G1852 Fragaria x ananassa HOM05D005926 ORTHO05D007001 1.1e-98 365.2 570 45.6
CiPaw.14G029200 Carya illinoinensis HOM05D005926 ORTHO05D007001 1.2e-97 361.7 732 39.8
Potri.008G025000 Populus trichocarpa HOM05D005926 ORTHO05D007001 1.1e-95 355.1 710 39.7
Hma1.2p1_0010F.1_g007030 Hydrangea macrophylla HOM05D005926 ORTHO05D007001 1.9e-95 354.4 491 50.7
Thecc.10G111000 Theobroma cacao HOM05D005926 ORTHO05D007001 2.5e-95 354.0 704 39.2
TAR369G1114 Trochodendron aralioides HOM05D005926 ORTHO05D007001 1.6e-94 351.3 797 38.1
COL.COLO4_06813 Corchorus olitorius HOM05D005926 ORTHO05D007001 2.8e-94 350.5 717 40.3
Gohir.D04G017400 Gossypium hirsutum HOM05D005926 ORTHO05D007001 3.7e-94 350.1 766 37.6
Prupe.2G085400 Prunus persica HOM05D005926 ORTHO05D007001 4.8e-94 349.7 740 40.0
Duzib128G1763 Durio zibethinus HOM05D005926 ORTHO05D007001 4.0e-93 346.7 717 40.3
Gorai.012G020100 Gossypium raimondii HOM05D005926 ORTHO05D007001 2.0e-92 344.4 770 37.4
MD07G1068100 Malus domestica HOM05D005926 ORTHO05D007001 2.6e-92 344.0 578 45.3
TAR636G3019 Trochodendron aralioides HOM05D005926 ORTHO05D007001 4.9e-91 339.7 647 42.2
Gohir.A05G398500 Gossypium hirsutum HOM05D005926 ORTHO05D007001 1.4e-90 338.2 776 37.0
Sabra08G0016800 Salix brachista HOM05D005926 ORTHO05D007001 8.7e-88 328.9 704 39.5
Nn2g14047 Nelumbo nucifera HOM05D005926 ORTHO05D007001 3.7e-86 323.6 674 39.2
Cc02_g10060 Coffea canephora HOM05D005926 ORTHO05D007001 3.1e-85 320.5 702 38.2
Eucgr.G02709 Eucalyptus grandis HOM05D005926 ORTHO05D007001 4.0e-85 320.1 708 38.3
CsaV3_6G004110 Cucumis sativus L. HOM05D005926 ORTHO05D007001 1.2e-84 318.5 704 37.8
ClCG08G008140 Citrullus lanatus HOM05D005926 ORTHO05D007001 2.0e-84 317.8 702 37.9
Sabra10G0182600 Salix brachista HOM05D005926 ORTHO05D007001 7.6e-84 315.8 784 37.1
Peaxi162Scf00004g00119 Petunia axillaris HOM05D005926 ORTHO05D007001 1.1e-82 312.0 699 38.6
SalBow6G1645 Salvia bowleyana HOM05D005926 ORTHO05D007001 3.2e-82 310.5 687 38.0
Cpa.g.sc19.23 Carica papaya HOM05D005926 ORTHO05D007001 4.2e-82 310.1 839 33.5
MELO3C019887.2 Cucumis melo HOM05D005926 ORTHO05D007001 9.3e-82 308.9 718 37.0
Nn6g35019 Nelumbo nucifera HOM05D005926 ORTHO05D007001 1.6e-81 308.1 685 38.2
Nitab4.5_0002878g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 3.5e-81 307.0 684 38.0
DCAR_014349 Daucus carota HOM05D005926 ORTHO05D007001 5.7e-79 299.7 681 38.3
Glyma.10G202600 Glycine max HOM05D005926 ORTHO05D007001 5.7e-79 299.7 693 36.5
Lj5g0002236 Lotus japonicus HOM05D005926 ORTHO05D007001 2.2e-78 297.7 696 36.8
Nitab4.5_0001027g0040 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.4e-77 295.0 716 36.7
Phvul.007G104500 Phaseolus vulgaris HOM05D005926 ORTHO05D007001 1.5e-76 291.6 684 35.5
Glyma.20G187800 Glycine max HOM05D005926 ORTHO05D007001 5.0e-75 286.6 697 36.6
Aqoxy4G02869 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 9.4e-74 282.3 707 35.6
Ca_10497_v3 Cicer arietinum L. HOM05D005926 ORTHO05D007001 9.4e-74 282.3 689 36.4
Nitab4.5_0012334g0010 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.2e-73 282.0 672 37.2
PGSC0003DMG400023487 Solanum tuberosum HOM05D005926 ORTHO05D007001 2.7e-73 280.8 696 36.8
Nitab4.5_0003396g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 3.6e-73 280.4 625 37.8
Sopen05g033810 Solanum pennellii HOM05D005926 ORTHO05D007001 4.6e-73 280.0 707 35.9
Psat6g176680 Pisum sativum HOM05D005926 ORTHO05D007001 5.7e-71 273.1 585 38.5
Sc06g0002210 Simmondsia chinensis HOM05D005926 ORTHO05D007001 7.4e-71 272.7 685 35.6
CAN.G1550.12 Capsicum annuum HOM05D005926 ORTHO05D007001 1.3e-70 271.9 637 37.8
TPR.G2562 Trifolium pratense HOM05D005926 ORTHO05D007001 1.4e-69 268.5 642 36.4
PGR142G4330 Punica granatum HOM05D005926 ORTHO05D007001 2.4e-69 267.7 679 35.6
Migut.F00893 Erythranthe guttata HOM05D005926 ORTHO05D007001 5.3e-69 266.5 703 35.3
Medtr1g492840 Medicago truncatula HOM05D005926 ORTHO05D007001 5.3e-69 266.5 693 34.3
Sed0009709 Sechium edule HOM05D005926 ORTHO05D007001 9.1e-69 265.8 675 36.0
ECA232G4290 Erigeron canadensis HOM05D005926 ORTHO05D007001 5.9e-68 263.1 591 38.2
Lalb_Chr03g0036371 Lupinus albus HOM05D005926 ORTHO05D007001 1.0e-67 262.3 702 35.3
Haze_02593 Corylus avellana HOM05D005926 ORTHO05D007001 6.5e-67 259.6 314 54.8
Solyc05g055360.4 Solanum lycopersicum HOM05D005926 ORTHO05D007001 1.1e-66 258.8 704 34.4
SGA_v2.0_scaffold62G21348 Striga asiatica HOM05D005926 ORTHO05D007001 5.5e-66 256.5 674 35.9
arahy.Tifrunner.gnm1.ann1.J9ASUV Arachis hypogaea HOM05D005926 ORTHO05D007001 6.1e-65 253.1 697 33.7
Dinv20819 Davidia involucrata HOM05D005926 ORTHO05D007001 1.3e-62 245.4 347 49.0
Sed0000046 Sechium edule HOM05D005926 ORTHO05D007001 1.3e-62 245.4 657 34.4
HanXRQChr05g0147041 Helianthus annuus HOM05D005926 ORTHO05D007001 1.1e-61 242.3 608 36.5
PGSC0003DMG400027309 Solanum tuberosum HOM05D005926 ORTHO05D007001 1.4e-61 241.9 674 34.9
VMungo0720G0267 Vigna mungo HOM05D005926 ORTHO05D007001 1.4e-61 241.9 665 33.5
Ah.04g163700 Amaranthus hybridus HOM05D005926 ORTHO05D007001 5.0e-59 233.4 589 35.0
Aqoxy2G01361 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 1.4e-58 231.9 695 32.2
AUR62041545 Chenopodium quinoa HOM05D005926 ORTHO05D007001 5.5e-58 229.9 697 31.4
Lsat_1_v5_gn_6_90261 Lactuca sativa HOM05D005926 ORTHO05D007001 6.7e-56 223.0 609 37.3
PSO384G0761 Papaver somniferum HOM05D005926 ORTHO05D007001 8.2e-54 216.1 550 35.6
PSO339G4155 Papaver somniferum HOM05D005926 ORTHO05D007001 5.3e-53 213.4 546 35.9
Sopen11g003350 Solanum pennellii HOM05D005926 ORTHO05D007001 3.8e-51 207.2 611 34.2
Solyc11g007510.2 Solanum lycopersicum HOM05D005926 ORTHO05D007001 1.5e-50 205.3 614 33.7
EL10Ac4g08669 Beta vulgaris HOM05D005926 ORTHO05D007001 4.2e-50 203.8 680 31.3
THA.LOC104814724 Tarenaya hassleriana HOM05D005926 ORTHO05D007001 2.0e-47 194.9 668 31.0
CARHR161990 Cardamine hirsuta HOM05D005926 ORTHO05D007001 7.5e-47 193.0 683 30.5
arahy.Tifrunner.gnm1.ann1.9BC44J Arachis hypogaea HOM05D005926 ORTHO05D007001 9.7e-47 192.6 644 31.4
Carub.0005s1860 Capsella rubella HOM05D005926 ORTHO05D007001 6.3e-46 189.9 653 30.3
AT3G52240 Arabidopsis thaliana HOM05D005926 ORTHO05D007001 1.8e-45 188.3 702 28.5
Thhalv10010215m.g Eutrema salsugineum HOM05D005926 ORTHO05D007001 4.1e-45 187.2 638 31.0
AL5G32830 Arabidopsis lyrata HOM05D005926 ORTHO05D007001 2.0e-44 184.9 701 27.7
Sp5g10020 Schrenkiella parvula HOM05D005926 ORTHO05D007001 1.5e-42 178.7 639 29.0
BcaB02g08582 Brassica carinata HOM05D005926 ORTHO05D007001 5.5e-42 176.8 587 31.3
A09p45300 Brassica napus HOM05D005926 ORTHO05D007001 3.6e-41 174.1 656 28.4
BraA09t39993Z Brassica rapa HOM05D005926 ORTHO05D007001 3.6e-41 174.1 657 28.6
PSO443G0029 Papaver somniferum HOM05D005926 ORTHO05D007001 3.0e-40 171.0 328 42.7
C08p27480 Brassica napus HOM05D005926 ORTHO05D007001 4.0e-40 170.6 685 27.7
BolC8t50365H Brassica oleracea HOM05D005926 ORTHO05D007001 4.0e-40 170.6 685 27.7
BolC4t25653H Brassica oleracea HOM05D005926 ORTHO05D007001 1.7e-38 165.2 573 30.4
BcaC02g09269 Brassica carinata HOM05D005926 ORTHO05D007001 2.8e-38 164.5 573 30.4
C04p40700 Brassica napus HOM05D005926 ORTHO05D007001 2.8e-38 164.5 574 30.3
BraA04t16409Z Brassica rapa HOM05D005926 ORTHO05D007001 7.0e-37 159.8 584 30.7
Aa31LG10G7340 Aethionema arabicum HOM05D005926 ORTHO05D007001 2.0e-36 158.3 714 28.4
GSVIVG01031385001 Vitis vinifera HOM05D005926 ORTHO05D007001 5.9e-36 156.8 637 31.1
BcaC07g39594 Brassica carinata HOM05D005926 ORTHO05D007001 1.7e-35 155.2 673 27.0
A04p07120 Brassica napus HOM05D005926 ORTHO05D007001 1.1e-34 152.5 586 30.7
Haze_02594 Corylus avellana HOM05D005926 ORTHO05D007001 4.7e-33 147.1 413 36.3
CDE04G2986 Ceratophyllum demersum HOM05D005926 ORTHO05D007001 1.4e-32 145.6 582 30.1
Os05g0445800 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 5.4e-29 133.7 357 32.2
ATR0820G003 Amborella trichopoda HOM05D005926 ORTHO05D007001 1.6e-25 122.1 580 28.8
Zm00001eb289020 Zea mays HOM05D005926 ORTHO05D007001 2.1e-25 121.7 406 29.8
Zm00001eb147390 Zea mays HOM05D005926 ORTHO05D007001 1.8e-24 118.6 310 35.5
Os05g0446500 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 5.2e-24 117.1 355 31.5
unitig_0.g760 Utricularia gibba HOM05D005926 ORTHO05D007001 5.8e-23 113.6 189 43.9
HPP92_002057 Vanilla planifolia HOM05D005926 ORTHO05D007001 1.3e-22 112.5 203 39.9
arahy.Tifrunner.gnm1.ann1.UA3HQT Arachis hypogaea HOM05D005926 ORTHO05D007001 2.4e-21 108.2 301 34.6
Oeu026567.1 Olea europaea HOM05D005926 ORTHO05D007001 4.1e-21 107.5 354 29.9
arahy.Tifrunner.gnm1.ann1.L8M84U Arachis hypogaea HOM05D005926 ORTHO05D007001 3.5e-20 104.4 301 33.9
SEGI_23583 Sequoiadendron giganteum HOM05D005926 ORTHO05D007001 3.0e-19 101.3 364 30.8
Os04g0646050 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 2.3e-16 91.7 148 41.9
Actinidia31091 Actinidia chinensis HOM05D005926 ORTHO05D007001 5.4e-13 80.5 138 42.0
Pp3c6_4890 Physcomitrium patens HOM05D031130 ORTHO05D019295 1.3e-06 59.3 69 49.3
AagrBONN_evm.TU.Sc2ySwM_228.4811 Anthoceros agrestis HOM05D005926 ORTHO05D007001 2.9e-06 58.2 377 26.5

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (2 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (4 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (3 genes)
Papaver somniferum (3 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (2 genes)
Zea mays (2 genes)

Program Settings