Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030415 Camellia sinensis var. sinensis HOM05D005584 ORTHO05D006809 6.3e-120 434.1 218 100.0
CSS0021029 Camellia sinensis var. sinensis HOM05D005584 ORTHO05D006809 2.3e-109 399.1 218 93.6
Dinv15274 Davidia involucrata HOM05D001482 ORTHO05D001499 1.6e-94 349.7 230 78.3
Actinidia08155 Actinidia chinensis HOM05D005584 ORTHO05D006809 9.5e-92 340.5 231 78.4
vmacro01156 Vaccinium macrocarpon HOM05D005584 ORTHO05D006809 8.9e-90 334.0 223 77.6
Hma1.2p1_0587F.1_g184080 Hydrangea macrophylla HOM05D005584 ORTHO05D006809 5.8e-89 331.3 230 75.2
TAR374G1289 Trochodendron aralioides HOM05D005584 ORTHO05D006809 1.4e-87 326.6 231 74.0
GSVIVG01013774001 Vitis vinifera HOM05D005584 ORTHO05D006809 2.1e-83 312.8 231 69.3
Thecc.02G253500 Theobroma cacao HOM05D005584 ORTHO05D006809 2.8e-83 312.4 229 70.7
Gohir.A01G162200 Gossypium hirsutum HOM05D005584 ORTHO05D006809 5.8e-81 304.7 229 68.1
Rhsim12G0043700 Rhododendron simsii HOM05D005584 ORTHO05D006809 7.6e-81 304.3 227 71.4
CiPaw.05G185800 Carya illinoinensis HOM05D005584 ORTHO05D006809 1.7e-80 303.1 231 69.7
Duzib251G0376 Durio zibethinus HOM05D005584 ORTHO05D006809 3.8e-80 302.0 229 67.2
Ciclev10032655m.g Citrus clementina HOM05D005584 ORTHO05D006809 4.9e-80 301.6 231 68.4
Manes.12G026800 Manihot esculenta HOM05D005584 ORTHO05D006809 4.9e-80 301.6 231 69.3
Prupe.4G221000 Prunus persica HOM05D005584 ORTHO05D006809 6.4e-80 301.2 231 67.1
Atru.chr11.2060 Acer truncatum HOM05D005584 ORTHO05D006809 8.4e-80 300.8 231 68.0
Cpa.g.sc69.68 Carica papaya HOM05D005584 ORTHO05D006809 1.4e-79 300.1 231 66.2
COL.COLO4_24203 Corchorus olitorius HOM05D005584 ORTHO05D006809 2.4e-79 299.3 229 67.2
Gohir.D05G347832 Gossypium hirsutum HOM05D005584 ORTHO05D006809 2.4e-79 299.3 229 66.8
PGSC0003DMG400033619 Solanum tuberosum HOM05D005584 ORTHO05D006809 3.2e-79 298.9 232 67.2
Sopen08g021760 Solanum pennellii HOM05D005584 ORTHO05D006809 5.4e-79 298.1 232 67.2
MD11G1211500 Malus domestica HOM05D005584 ORTHO05D006809 7.1e-79 297.7 231 66.2
Solyc08g067820.3 Solanum lycopersicum HOM05D005584 ORTHO05D006809 7.1e-79 297.7 232 67.2
Gohir.D08G021700 Gossypium hirsutum HOM05D005584 ORTHO05D006809 2.1e-78 296.2 229 66.4
RcHm_v2.0_Chr5g0041131 Rosa chinensis HOM05D005584 ORTHO05D006809 2.7e-78 295.8 231 68.0
QL03p059496 Quercus lobata HOM05D005584 ORTHO05D006809 4.6e-78 295.0 237 67.5
arahy.Tifrunner.gnm1.ann1.0L0HR0 Arachis hypogaea HOM05D005584 ORTHO05D006809 7.8e-78 294.3 226 66.8
arahy.Tifrunner.gnm1.ann1.5FW2L6 Arachis hypogaea HOM05D005584 ORTHO05D006809 7.8e-78 294.3 226 66.8
Potri.009G167600 Populus trichocarpa HOM05D005584 ORTHO05D006809 7.8e-78 294.3 234 67.9
MSTRG.2403 Avicennia marina HOM05D005584 ORTHO05D006809 2.3e-77 292.7 225 65.8
Haze_12208 Corylus avellana HOM05D005584 ORTHO05D006809 2.3e-77 292.7 218 69.3
FvH4_3g23340 Fragaria vesca HOM05D005584 ORTHO05D006809 2.3e-77 292.7 231 67.5
Gohir.D01G149500 Gossypium hirsutum HOM05D005584 ORTHO05D006809 2.3e-77 292.7 229 65.9
TWI18G1102 Tripterygium wilfordii HOM05D005584 ORTHO05D006809 2.3e-77 292.7 233 67.4
Sabra09G0130200 Salix brachista HOM05D005584 ORTHO05D006809 5.1e-77 291.6 235 67.7
Lj1g0002439 Lotus japonicus HOM05D005584 ORTHO05D006809 8.6e-77 290.8 227 67.4
Ca_28318_v3 Cicer arietinum L. HOM05D005584 ORTHO05D006809 3.3e-76 288.9 224 68.8
FAN16G0047 Fragaria x ananassa HOM05D005584 ORTHO05D006809 4.3e-76 288.5 231 65.4
MBI10_g28000_MAGBIO Magnolia biondii HOM05D005584 ORTHO05D006809 5.6e-76 288.1 227 68.7
PGR142G0158 Punica granatum HOM05D005584 ORTHO05D006809 7.3e-76 287.7 226 67.3
FAN21G3548 Fragaria x ananassa HOM05D005584 ORTHO05D006809 1.2e-75 287.0 231 66.2
Nn4g22723 Nelumbo nucifera HOM05D005584 ORTHO05D006809 1.2e-75 287.0 233 67.4
Lj3g0022996 Lotus japonicus HOM05D005584 ORTHO05D006809 2.8e-75 285.8 227 66.5
Oeu056410.1 Olea europaea HOM05D005584 ORTHO05D006809 3.6e-75 285.4 218 66.1
FAN25G2737 Fragaria x ananassa HOM05D005584 ORTHO05D006809 4.7e-75 285.0 231 66.2
Cc08_g15830 Coffea canephora HOM05D005584 ORTHO05D006809 6.2e-75 284.6 219 67.1
Migut.E00177 Erythranthe guttata HOM05D005584 ORTHO05D006809 6.2e-75 284.6 233 64.8
Nn2g14080 Nelumbo nucifera HOM05D005584 ORTHO05D006809 6.2e-75 284.6 233 66.5
CANSAT56G2850 Cannabis sativa HOM05D005584 ORTHO05D006809 1.1e-74 283.9 230 63.5
Medtr5g077780 Medicago truncatula HOM05D005584 ORTHO05D006809 2.4e-74 282.7 223 65.5
Peaxi162Scf00105g01417 Petunia axillaris HOM05D005584 ORTHO05D006809 2.4e-74 282.7 223 65.5
Lsat_1_v5_gn_9_120260 Lactuca sativa HOM05D005584 ORTHO05D006809 3.1e-74 282.3 234 66.2
Cfa009174 Carpinus fangiana HOM05D005584 ORTHO05D006809 2.9e-72 275.8 214 67.8
Eucgr.K03598 Eucalyptus grandis HOM05D005584 ORTHO05D006809 3.8e-72 275.4 228 63.6
Aqoxy3G01083 Aquilegia oxysepala HOM05D005584 ORTHO05D006809 6.4e-72 274.6 215 65.6
ECA233G2638 Erigeron canadensis HOM05D005584 ORTHO05D006809 8.4e-72 274.2 226 63.7
CsaV3_2G024710 Cucumis sativus L. HOM05D005584 ORTHO05D006809 2.4e-71 272.7 232 62.9
PSO017G5970 Papaver somniferum HOM05D005584 ORTHO05D006809 7.1e-71 271.2 231 62.8
Psat2g045680 Pisum sativum HOM05D005584 ORTHO05D006809 1.2e-70 270.4 223 64.6
Lalb_Chr12g0210051 Lupinus albus HOM05D005584 ORTHO05D006809 2.7e-70 269.2 231 62.8
PSO478G2901 Papaver somniferum HOM05D005584 ORTHO05D006809 1.0e-69 267.3 230 62.6
AUR62014068 Chenopodium quinoa HOM05D005584 ORTHO05D006809 1.3e-69 266.9 229 63.3
AL4G22490 Arabidopsis lyrata HOM05D005584 ORTHO05D006809 3.0e-69 265.8 225 62.2
FAN11G0752 Fragaria x ananassa HOM05D005584 ORTHO05D006809 3.9e-69 265.4 205 66.8
Sed0009924 Sechium edule HOM05D005584 ORTHO05D006809 5.1e-69 265.0 227 61.2
HanXRQChr12g0371541 Helianthus annuus HOM05D005584 ORTHO05D006809 1.9e-68 263.1 204 66.7
Phvul.011G052800 Phaseolus vulgaris HOM05D005584 ORTHO05D006809 1.9e-68 263.1 226 61.5
Thhalv10017205m.g Eutrema salsugineum HOM05D005584 ORTHO05D006809 4.3e-68 261.9 228 59.2
Carub.0004s0855 Capsella rubella HOM05D005584 ORTHO05D006809 1.6e-67 260.0 226 62.4
SalBow8G4058 Salvia bowleyana HOM05D005584 ORTHO05D006809 8.1e-67 257.7 217 63.6
Sp4g10620 Schrenkiella parvula HOM05D005584 ORTHO05D006809 3.1e-66 255.8 230 60.9
BraA07t29554Z Brassica rapa HOM05D005584 ORTHO05D006809 6.9e-66 254.6 230 58.7
A07p18380 Brassica napus HOM05D005584 ORTHO05D006809 9.0e-66 254.2 228 58.3
BcaC02g10906 Brassica carinata HOM05D005584 ORTHO05D006809 1.5e-65 253.4 230 59.1
unitig_62.g23668 Utricularia gibba HOM05D005584 ORTHO05D006809 1.5e-65 253.4 221 61.1
Hund25366 Selenicereus undatus HOM05D005584 ORTHO05D003410 3.4e-65 252.3 272 53.7
C04p23810 Brassica napus HOM05D005584 ORTHO05D006809 4.5e-65 251.9 230 58.7
BolC4t23879H Brassica oleracea HOM05D005584 ORTHO05D006809 2.2e-64 249.6 230 58.3
VMungo1127G1231 Vigna mungo HOM05D005584 ORTHO05D006809 8.4e-64 247.7 201 63.7
CARHR120490 Cardamine hirsuta HOM05D005584 ORTHO05D006809 1.1e-63 247.3 226 59.3
Dinv24830 Davidia involucrata HOM05D005584 ORTHO05D006809 1.1e-63 247.3 177 75.7
Aa31LG5G8210 Aethionema arabicum HOM05D005584 ORTHO05D006809 1.9e-63 246.5 256 54.3
BcaB02g10116 Brassica carinata HOM05D005584 ORTHO05D006809 1.6e-62 243.4 199 61.8
SGA_v2.0_scaffold57G20112 Striga asiatica HOM05D005584 ORTHO05D006809 1.6e-62 243.4 206 64.1
ClCG08G017930 Citrullus lanatus HOM05D005584 ORTHO05D006809 2.1e-62 243.0 208 63.5
Lj6A807T86 Lonicera japonica HOM05D005584 ORTHO05D006809 2.1e-62 243.0 232 58.2
Nitab4.5_0006579g0040 Nicotiana tabacum HOM05D005584 ORTHO05D006809 2.3e-61 239.6 188 65.4
HPP92_004538 Vanilla planifolia HOM05D005584 ORTHO05D006809 2.3e-61 239.6 206 61.7
Hma1.2p1_0223F.1_g094390 Hydrangea macrophylla HOM05D005584 ORTHO05D006809 8.7e-61 237.7 177 72.9
Gorai.009G374800 Gossypium raimondii HOM05D005584 ORTHO05D006809 1.1e-60 237.3 229 58.1
Glyma.12G050500 Glycine max HOM05D005584 ORTHO05D006809 1.8e-58 229.9 179 67.0
Nitab4.5_0000125g0200 Nicotiana tabacum HOM05D005584 ORTHO05D006809 1.8e-58 229.9 160 71.2
Lsat_1_v5_gn_8_155560 Lactuca sativa HOM05D005584 ORTHO05D006809 6.9e-58 228.0 197 63.5
Zm00001eb209860 Zea mays HOM05D005584 ORTHO05D006809 4.5e-57 225.3 256 51.6
Gorai.002G185600 Gossypium raimondii HOM05D005584 ORTHO05D006809 3.8e-56 222.2 220 56.4
AT5G27300 Arabidopsis thaliana HOM05D005584 ORTHO05D006809 7.1e-55 218.0 211 57.3
SGA_v2.0_scaffold74G24685 Striga asiatica HOM05D005584 ORTHO05D006809 3.9e-53 212.2 196 59.7
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 3.9e-53 212.2 220 56.8
CDE06G1284 Ceratophyllum demersum HOM05D005584 ORTHO05D006809 5.1e-53 211.8 221 54.8
TPR.G25316 Trifolium pratense HOM05D005584 ORTHO05D006809 6.7e-53 211.5 122 80.3
EL10Ac6g13701 Beta vulgaris HOM05D005584 ORTHO05D006809 1.5e-52 210.3 231 54.5
ATR1091G072 Amborella trichopoda HOM05D005584 ORTHO05D006809 7.4e-52 208.0 207 57.5
AUR62005408 Chenopodium quinoa HOM05D005584 ORTHO05D006809 1.4e-50 203.8 230 53.0
SEGI_24248 Sequoiadendron giganteum HOM05D005584 ORTHO05D006809 8.4e-48 194.5 252 48.4
Potri.006G221301 Populus trichocarpa HOM05D005584 ORTHO05D006809 6.7e-45 184.9 213 53.1
Gorai.001G098200 Gossypium raimondii HOM05D005584 ORTHO05D006809 3.3e-44 182.6 203 49.8
DCAR_026533 Daucus carota HOM05D005584 ORTHO05D006809 7.4e-44 181.4 171 60.8
Mapoly0029s0094 Marchantia polymorpha HOM05D005584 ORTHO05D006809 3.7e-43 179.1 262 44.7
BcaB06g28170 Brassica carinata HOM05D005584 ORTHO05D006809 4.8e-43 178.7 119 69.7
MELO3C010671.2 Cucumis melo HOM05D005584 ORTHO05D006809 4.8e-43 178.7 221 49.8
Sc11g0001080 Simmondsia chinensis HOM05D005584 ORTHO05D006809 5.9e-41 171.8 176 56.8
Eucgr.D00612 Eucalyptus grandis HOM05D005584 ORTHO05D006809 1.3e-40 170.6 178 53.9
CANSAT64G2516 Cannabis sativa HOM05D002890 ORTHO05D005855 1.7e-40 170.2 96 79.2
Ah.02g130030 Amaranthus hybridus HOM05D005584 ORTHO05D006809 7.9e-38 161.4 180 52.2
AT2G27790 Arabidopsis thaliana HOM05D005584 ORTHO05D006809 1.0e-37 161.0 188 51.6
Pp3c16_13430 Physcomitrium patens HOM05D005584 ORTHO05D006809 3.1e-34 149.4 208 44.2
CAN.G21.11 Capsicum annuum HOM05D005584 ORTHO05D006809 5.5e-31 138.7 103 68.9
QL01p007518 Quercus lobata HOM05D005584 ORTHO05D006809 1.3e-24 117.5 165 45.5
SHI17678 Sapria himalayana HOM05D005584 ORTHO05D006809 5.0e-24 115.5 69 79.7
Hund18879 Selenicereus undatus HOM05D005584 ORTHO05D006809 7.9e-22 108.2 175 42.9
SMO361G0752 Selaginella moellendorffii HOM05D005584 ORTHO05D006809 7.4e-20 101.7 67 65.7
COL.COLO4_24201 Corchorus olitorius HOM05D005584 ORTHO05D006809 2.8e-19 99.8 57 73.7
Gorai.004G016800 Gossypium raimondii HOM05D005584 ORTHO05D006809 5.9e-17 92.0 71 67.6
BcaB05g23234 Brassica carinata HOM05D005584 ORTHO05D006809 5.0e-16 89.0 68 70.6
Ca_05838_v3 Cicer arietinum L. HOM05D005584 ORTHO05D006809 5.0e-16 89.0 49 79.6
CAN.G414.8 Capsicum annuum HOM05D000928 ORTHO05D001186 1.1e-15 87.8 50 72.0
CBR_g19306 Chara braunii HOM05D005584 ORTHO05D006809 3.2e-15 86.3 115 46.1
MBI12_g21981_MAGBIO Magnolia biondii HOM05D001465 ORTHO05D001434 4.7e-14 82.4 48 81.2
MBI02_g44783_MAGBIO Magnolia biondii HOM05D005584 ORTHO05D006809 1.0e-13 81.3 48 81.2
MBI02_g20871_MAGBIO Magnolia biondii HOM05D005584 ORTHO05D006809 1.4e-13 80.9 48 81.2
Os02g0105000 Oryza sativa ssp. japonica HOM05D005584 ORTHO05D006809 2.3e-13 80.1 48 81.2
MBI02_g25373_MAGBIO Magnolia biondii HOM05D005584 ORTHO05D006809 3.0e-13 79.7 48 79.2
MBI14_g03623_MAGBIO Magnolia biondii HOM05D000013 ORTHO05D006809 3.0e-13 79.7 48 77.1
MBI19_g26621_MAGBIO Magnolia biondii HOM05D005584 ORTHO05D006809 2.8e-11 73.2 43 79.1
Gohir.A07G086801 Gossypium hirsutum HOM05D005584 ORTHO05D006809 3.7e-11 72.8 59 64.4
Gohir.D07G091700 Gossypium hirsutum HOM05D005584 ORTHO05D006809 4.8e-11 72.4 90 48.9
MBI14_g10639_MAGBIO Magnolia biondii HOM05D005584 ORTHO05D006809 6.3e-11 72.0 43 79.1
MBI03_g02127_MAGBIO Magnolia biondii HOM05D002786 ORTHO05D006809 8.5e-08 61.6 42 66.7
Glyma.11G125900 Glycine max HOM05D005584 ORTHO05D006809 7.2e-07 58.5 29 86.2

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (2 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (6 genes)
Gossypium raimondii (4 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (9 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings