Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029680 Camellia sinensis var. sinensis HOM05D002380 ORTHO05D008286 0.0e+00 1223.8 608 100.0
Actinidia13740 Actinidia chinensis HOM05D002380 ORTHO05D008286 1.3e-308 1062.4 602 87.5
Rhsim06G0166100 Rhododendron simsii HOM05D002380 ORTHO05D008286 7.8e-285 983.4 603 82.1
Hma1.2p1_0445F.1_g154520 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 9.5e-283 976.5 553 86.1
GSVIVG01030484001 Vitis vinifera HOM05D002380 ORTHO05D008286 1.4e-281 972.6 595 81.3
QL08p031162 Quercus lobata HOM05D002380 ORTHO05D008286 1.7e-276 955.7 568 82.9
Cfa014331 Carpinus fangiana HOM05D002380 ORTHO05D008286 4.7e-274 947.6 574 81.0
Potri.014G156800 Populus trichocarpa HOM05D002380 ORTHO05D008286 1.8e-273 945.7 578 80.4
CiPaw.04G112000 Carya illinoinensis HOM05D002380 ORTHO05D008286 6.9e-273 943.7 588 80.3
Ciclev10014719m.g Citrus clementina HOM05D002380 ORTHO05D008286 9.9e-272 939.9 579 80.7
HanXRQChr10g0306601 Helianthus annuus HOM05D002380 ORTHO05D008286 6.4e-271 937.2 598 77.1
PSO541G2284 Papaver somniferum HOM05D002380 ORTHO05D008286 6.4e-271 937.2 560 82.3
ECA234G2702 Erigeron canadensis HOM05D002380 ORTHO05D008286 1.9e-270 935.6 600 75.7
CAN.G855.60 Capsicum annuum HOM05D002380 ORTHO05D008286 7.8e-269 930.2 592 77.4
Nn1g03403 Nelumbo nucifera HOM05D002380 ORTHO05D008286 1.3e-268 929.5 555 81.1
Sopen01g045360 Solanum pennellii HOM05D002380 ORTHO05D008286 3.0e-268 928.3 587 77.5
Solyc01g102950.3 Solanum lycopersicum HOM05D002380 ORTHO05D008286 3.9e-268 927.9 587 77.5
Duzib138G0368 Durio zibethinus HOM05D002380 ORTHO05D008286 3.3e-267 924.9 581 78.5
Lj1A778T40 Lonicera japonica HOM05D002380 ORTHO05D008286 5.6e-267 924.1 672 70.4
FvH4_6g42610 Fragaria vesca HOM05D002380 ORTHO05D008286 2.8e-266 921.8 551 80.8
Cc05_g03220 Coffea canephora HOM05D002380 ORTHO05D008286 6.2e-266 920.6 564 78.4
MD09G1112100 Malus domestica HOM05D002380 ORTHO05D008286 6.9e-265 917.1 556 80.2
Gohir.D07G193100 Gossypium hirsutum HOM05D002380 ORTHO05D008286 1.5e-264 916.0 576 79.0
TWI18G0959 Tripterygium wilfordii HOM05D002380 ORTHO05D008286 1.5e-264 916.0 556 79.9
ClCG02G002150 Citrullus lanatus HOM05D002380 ORTHO05D008286 2.0e-264 915.6 588 76.0
Gorai.001G216200 Gossypium raimondii HOM05D002380 ORTHO05D008286 2.0e-264 915.6 576 78.8
Migut.H01235 Erythranthe guttata HOM05D002380 ORTHO05D008286 2.6e-264 915.2 572 77.8
Gohir.A07G186600 Gossypium hirsutum HOM05D002380 ORTHO05D008286 4.5e-264 914.4 553 81.0
RcHm_v2.0_Chr2g0158461 Rosa chinensis HOM05D002380 ORTHO05D008286 7.6e-264 913.7 551 80.2
Sabra14G0118600 Salix brachista HOM05D002380 ORTHO05D008286 9.9e-264 913.3 657 70.8
LjContig00564g0004339 Lotus japonicus HOM05D002380 ORTHO05D008286 1.3e-263 912.9 575 77.9
Nitab4.5_0005164g0050 Nicotiana tabacum HOM05D002380 ORTHO05D006960 1.7e-263 912.5 591 76.1
LjContig00564g0001978 Lotus japonicus HOM05D002380 ORTHO05D008286 1.1e-262 909.8 575 77.9
Atru.chr6.3236 Acer truncatum HOM05D002380 ORTHO05D008286 5.4e-262 907.5 560 79.8
Thecc.01G180100 Theobroma cacao HOM05D002380 ORTHO05D008286 7.1e-262 907.1 551 80.8
Prupe.3G212600 Prunus persica HOM05D002380 ORTHO05D008286 1.6e-261 906.0 538 82.0
PSO675G4452 Papaver somniferum HOM05D002380 ORTHO05D008286 3.5e-261 904.8 560 80.4
SalBow1G4831 Salvia bowleyana HOM05D002380 ORTHO05D008286 6.0e-261 904.0 567 76.9
Eucgr.A01100 Eucalyptus grandis HOM05D002380 ORTHO05D008286 7.9e-261 903.7 554 78.2
SalBow1G6561 Salvia bowleyana HOM05D002380 ORTHO05D008286 7.9e-261 903.7 567 76.7
FAN05G1087 Fragaria x ananassa HOM05D002380 ORTHO05D008286 1.8e-260 902.5 622 73.2
Glyma.14G046600 Glycine max HOM05D002380 ORTHO05D008286 1.8e-260 902.5 591 75.8
Sed0027871 Sechium edule HOM05D002380 ORTHO05D008286 1.8e-260 902.5 562 78.5
CsaV3_7G003340 Cucumis sativus L. HOM05D002380 ORTHO05D008286 1.9e-259 899.0 588 74.3
Medtr8g465870 Medicago truncatula HOM05D002380 ORTHO05D008286 3.3e-259 898.3 557 78.1
CANSAT64G0203 Cannabis sativa HOM05D002380 ORTHO05D008286 9.6e-259 896.7 592 75.0
PGR042G3960 Punica granatum HOM05D002380 ORTHO05D008286 2.1e-258 895.6 548 79.7
arahy.Tifrunner.gnm1.ann1.Y9X1U6 Arachis hypogaea HOM05D002380 ORTHO05D008286 3.1e-257 891.7 554 77.8
FAN14G4830 Fragaria x ananassa HOM05D002380 ORTHO05D008286 9.0e-257 890.2 617 73.4
VMungo0647G2578 Vigna mungo HOM05D002380 ORTHO05D008286 2.0e-256 889.0 559 77.3
AUR62040170 Chenopodium quinoa HOM05D002380 ORTHO05D008286 6.4e-255 884.0 585 74.5
arahy.Tifrunner.gnm1.ann1.C2B2I7 Arachis hypogaea HOM05D002380 ORTHO05D008286 8.4e-255 883.6 563 76.7
AUR62037919 Chenopodium quinoa HOM05D002380 ORTHO05D008286 2.1e-253 879.0 592 73.1
DCAR_019750 Daucus carota HOM05D002380 ORTHO05D008286 2.1e-250 869.0 588 73.8
Phvul.008G211500 Phaseolus vulgaris HOM05D002380 ORTHO05D008286 8.1e-250 867.1 564 76.6
Peaxi162Scf00011g02118 Petunia axillaris HOM05D002380 ORTHO05D008286 1.0e-247 860.1 612 71.2
vmacro12176 Vaccinium macrocarpon HOM05D002380 ORTHO05D008286 1.1e-246 856.7 630 72.2
TAR626G1235 Trochodendron aralioides HOM05D002380 ORTHO05D008286 1.3e-242 843.2 513 82.5
CDE04G2212 Ceratophyllum demersum HOM05D002380 ORTHO05D008286 1.2e-240 836.6 547 74.4
Aa31LG5G4710 Aethionema arabicum HOM05D002380 ORTHO05D008286 1.5e-240 836.3 551 72.4
Thhalv10016422m.g Eutrema salsugineum HOM05D002380 ORTHO05D008286 2.6e-240 835.5 551 72.6
Nitab4.5_0003247g0030 Nicotiana tabacum HOM05D002380 ORTHO05D006960 2.6e-240 835.5 593 70.5
THA.LOC104826140 Tarenaya hassleriana HOM05D002380 ORTHO05D008286 2.6e-240 835.5 551 73.7
Lsat_1_v5_gn_5_123621 Lactuca sativa HOM05D002380 ORTHO05D008286 3.4e-240 835.1 602 70.1
Sp4g14960 Schrenkiella parvula HOM05D002380 ORTHO05D008286 2.2e-239 832.4 551 72.2
Carub.0004s1397 Capsella rubella HOM05D002380 ORTHO05D008286 3.8e-239 831.6 556 71.6
BcaC01g05900 Brassica carinata HOM05D002380 ORTHO05D008286 4.6e-237 824.7 551 71.7
C03p21270 Brassica napus HOM05D002380 ORTHO05D008286 6.1e-237 824.3 551 71.5
BraA03t11082Z Brassica rapa HOM05D002380 ORTHO05D008286 1.0e-236 823.5 551 71.7
CARHR126480 Cardamine hirsuta HOM05D002380 ORTHO05D008286 1.3e-236 823.2 560 70.7
BolC3t14508H Brassica oleracea HOM05D002380 ORTHO05D008286 2.3e-236 822.4 551 71.7
A03p18220 Brassica napus HOM05D002380 ORTHO05D008286 3.0e-236 822.0 551 71.7
AL4G28040 Arabidopsis lyrata HOM05D002380 ORTHO05D008286 1.6e-234 816.2 539 72.2
BcaB01g03970 Brassica carinata HOM05D002380 ORTHO05D008286 4.8e-234 814.7 551 71.0
Lalb_Chr04g0249901 Lupinus albus HOM05D002380 ORTHO05D008286 1.4e-233 813.1 501 78.2
Os08g0422000 Oryza sativa ssp. japonica HOM05D002380 ORTHO05D008286 2.4e-233 812.4 547 72.6
Ca_06119_v3 Cicer arietinum L. HOM05D002380 ORTHO05D008286 2.9e-231 805.4 526 76.2
EL10Ac7g16733 Beta vulgaris HOM05D002380 ORTHO05D008286 3.8e-231 805.1 587 69.2
AUR62044039 Chenopodium quinoa HOM05D002380 ORTHO05D008286 4.2e-230 801.6 592 68.6
Psat0s2606g0080 Pisum sativum HOM05D002380 ORTHO05D008286 7.2e-230 800.8 497 79.7
ATR0059G008 Amborella trichopoda HOM05D002380 ORTHO05D008286 3.3e-227 792.0 553 68.2
Manes.12G071600 Manihot esculenta HOM05D002380 ORTHO05D008286 1.3e-223 780.0 482 79.7
Hma1.2p1_0445F.1_g154530 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 2.5e-222 775.8 550 71.6
MELO3C018839.2 Cucumis melo HOM05D002380 ORTHO05D008286 1.1e-219 766.9 512 74.2
Sc21g0001190 Simmondsia chinensis HOM05D002380 ORTHO05D008286 4.8e-218 761.5 486 77.0
Dinv08737 Davidia involucrata HOM05D002380 ORTHO05D008286 4.1e-217 758.4 455 84.4
Haze_12786 Corylus avellana HOM05D002380 ORTHO05D008286 1.6e-213 746.5 592 67.7
HPP92_026432 Vanilla planifolia HOM05D002380 ORTHO05D008286 2.7e-208 729.2 478 72.2
Aqoxy1G02993 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 2.7e-192 676.0 603 60.2
Pp3c11_22720 Physcomitrium patens HOM05D002380 ORTHO05D008286 3.8e-191 672.2 544 58.8
Mapoly0041s0126 Marchantia polymorpha HOM05D002380 ORTHO05D008286 1.7e-183 646.7 549 56.3
AagrBONN_evm.TU.Sc2ySwM_368.2332 Anthoceros agrestis HOM05D002380 ORTHO05D008286 1.1e-172 610.9 520 57.5
Hma1.2p1_0895F.1_g233700 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 4.1e-169 599.0 331 86.1
FAN02G0433 Fragaria x ananassa HOM05D002380 ORTHO05D008286 2.4e-161 573.2 529 60.7
Cpa.g.sc132.5 Carica papaya HOM05D002380 ORTHO05D008286 1.9e-158 563.5 369 75.6
SGA_v2.0_scaffold159G37563 Striga asiatica HOM05D002380 ORTHO05D001198 9.6e-158 561.2 577 53.9
COL.COLO4_21855 Corchorus olitorius HOM05D002380 ORTHO05D008286 1.6e-157 560.5 335 81.8
PGSC0003DMG400020719 Solanum tuberosum HOM05D002380 ORTHO05D008286 8.1e-157 558.1 319 81.2
Hund20419 Selenicereus undatus HOM05D002380 ORTHO05D008286 3.4e-147 526.2 344 71.5
Zm00001eb179140 Zea mays HOM05D002380 ORTHO05D008286 1.6e-141 507.3 447 60.4
AT2G32640 Arabidopsis thaliana HOM05D002380 ORTHO05D008286 1.2e-136 491.1 348 67.5
Cre06.g264250 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 4.8e-133 479.2 571 42.9
Ah.15g091260 Amaranthus hybridus HOM05D002380 ORTHO05D008286 1.2e-131 474.6 431 59.9
TPR.G26188 Trifolium pratense HOM05D002380 ORTHO05D008286 4.6e-128 462.6 335 70.1
SMO111G0098 Selaginella moellendorffii HOM05D002380 ORTHO05D008286 7.4e-110 402.1 375 53.6
Cpa.g.sc132.4 Carica papaya HOM05D002380 ORTHO05D008286 1.1e-102 378.3 205 87.3
Cre04.g221550 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 2.4e-100 370.5 641 35.1
unitig_62.g23230 Utricularia gibba HOM05D002380 ORTHO05D008286 2.8e-93 347.1 245 70.2
MBI19_g44049_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 7.0e-92 342.4 241 73.9
MBI19_g40900_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 2.5e-57 227.6 140 76.4
SEGI_31657 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 4.7e-56 223.4 160 67.5
SEGI_17941 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 6.8e-47 193.0 158 62.0
COL.COLO4_21854 Corchorus olitorius HOM05D002380 ORTHO05D008286 7.6e-46 189.5 129 69.0
CBR_g8452 Chara braunii HOM05D002380 ORTHO05D008286 4.9e-45 186.8 130 62.3
Aqoxy1G02984 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 4.6e-43 180.3 99 81.8
MBI19_g42463_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 7.8e-35 152.9 160 55.0
Hund20420 Selenicereus undatus HOM05D002380 ORTHO05D010615 1.6e-32 145.2 94 69.1
SEGI_28059 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 5.1e-26 123.6 77 76.6
CBR_g12620 Chara braunii HOM05D005350 ORTHO05D008838 1.1e-25 122.5 100 51.0
Actinidia09729 Actinidia chinensis HOM05D002380 ORTHO05D026288 7.4e-25 119.8 84 76.2
Actinidia09730 Actinidia chinensis HOM05D002380 ORTHO05D008286 1.3e-24 119.0 116 57.8
Gohir.A07G186850 Gossypium hirsutum HOM05D002380 ORTHO05D026288 4.9e-21 107.1 77 71.4
LjContig00564g0015808 Lotus japonicus HOM05D002380 ORTHO05D008286 3.2e-20 104.4 63 69.8
CBR_g8454 Chara braunii HOM05D002380 ORTHO05D008286 1.3e-13 82.4 92 41.3
SEGI_40123 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 1.1e-12 79.3 50 76.0
Lalb_Chr04g0249911 Lupinus albus HOM05D002380 ORTHO05D026288 4.6e-11 73.9 52 73.1
Lj1P772T14 Lonicera japonica HOM05D002380 ORTHO05D008286 3.0e-10 71.2 83 53.0
CAN.G96.10 Capsicum annuum HOM05D002380 ORTHO05D026288 9.0e-07 59.7 45 64.4

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (3 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (2 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (1 genes)
Gossypium hirsutum (3 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (3 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (3 genes)
Lupinus albus (2 genes)
Magnolia biondii (3 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (4 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings