Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 4.1e-108 394.8 210 100.0
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.0e-82 310.5 210 84.8
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 5.6e-73 278.1 210 76.7
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.1e-65 253.8 213 69.5
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 8.9e-63 244.2 213 68.1
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 4.2e-60 235.3 215 65.1
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 1.7e-58 229.9 213 62.4
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.5e-57 226.1 209 67.0
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 3.1e-55 219.2 212 61.3
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 2.2e-53 213.0 209 61.7
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 1.4e-52 210.3 214 59.3
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 4.6e-51 205.3 214 59.8
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 6.6e-50 201.4 215 56.3
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 1.1e-49 200.7 214 59.3
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 3.3e-49 199.1 211 59.2
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 2.8e-48 196.1 212 57.5
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 4.8e-48 195.3 214 58.4
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 8.1e-48 194.5 212 58.0
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 2.4e-47 193.0 214 54.7
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 2.4e-47 193.0 217 56.7
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 3.1e-47 192.6 211 55.5
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 1.2e-46 190.7 214 60.7
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 1.2e-46 190.7 213 57.7
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 2.6e-46 189.5 216 58.3
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 7.6e-46 188.0 212 57.5
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 1.7e-45 186.8 211 55.0
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 6.4e-45 184.9 215 54.9
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 1.1e-44 184.1 213 56.3
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 5.4e-44 181.8 211 54.5
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 9.3e-44 181.0 211 55.5
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 9.3e-44 181.0 215 58.1
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 4.6e-43 178.7 219 55.3
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 7.9e-43 177.9 217 54.4
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 7.9e-43 177.9 217 54.4
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 1.3e-42 177.2 215 54.9
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 1.8e-42 176.8 215 57.7
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 3.0e-42 176.0 210 54.8
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 3.0e-42 176.0 213 57.7
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 1.1e-41 174.1 214 53.7
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 1.9e-41 173.3 217 51.6
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 2.5e-41 172.9 216 56.9
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 3.3e-41 172.6 213 53.1
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 7.4e-41 171.4 212 53.3
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 1.3e-40 170.6 212 51.4
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 1.6e-40 170.2 215 54.9
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 1.8e-39 166.8 211 53.1
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 2.4e-39 166.4 214 53.3
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 2.6e-38 162.9 219 50.7
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 7.6e-38 161.4 212 51.4
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 1.3e-37 160.6 222 50.9
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 1.7e-37 160.2 212 51.4
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 2.5e-36 156.4 216 52.3
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 3.2e-36 156.0 213 51.6
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 3.2e-36 156.0 217 49.3
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 5.5e-36 155.2 217 49.8
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 1.6e-35 153.7 207 52.7
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 3.5e-35 152.5 217 48.8
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 3.5e-35 152.5 216 49.5
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 6.0e-35 151.8 221 48.0
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 1.3e-34 150.6 217 48.8
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 3.9e-34 149.1 209 50.2
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 1.1e-33 147.5 189 51.3
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 1.5e-33 147.1 217 48.4
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 1.9e-33 146.7 198 53.0
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 2.5e-33 146.4 224 48.2
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.3e-32 144.1 198 52.5
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 1.3e-32 144.1 201 49.3
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 3.7e-32 142.5 202 49.5
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 1.1e-31 141.0 198 50.0
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 1.4e-31 140.6 188 47.3
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 1.8e-31 140.2 193 50.8
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 1.8e-31 140.2 214 50.9
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 2.4e-31 139.8 221 46.6
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 3.1e-31 139.4 208 48.6
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 4.5e-30 135.6 213 49.3
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 1.0e-29 134.4 149 57.7
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 2.2e-29 133.3 205 48.3
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 2.9e-29 132.9 222 45.0
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 3.8e-29 132.5 193 47.2
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 6.5e-29 131.7 217 44.2
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 8.4e-29 131.3 219 45.2
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 1.1e-28 131.0 208 44.2
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 1.9e-28 130.2 218 45.4
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 1.9e-28 130.2 193 47.7
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 1.9e-28 130.2 219 44.7
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 3.2e-28 129.4 209 45.5
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 9.3e-28 127.9 202 42.1
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 1.2e-27 127.5 218 43.6
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 1.6e-27 127.1 170 51.2
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 2.7e-27 126.3 216 43.5
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 4.6e-27 125.6 213 43.7
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 1.0e-26 124.4 200 47.0
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 2.3e-26 123.2 217 44.7
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 9.7e-25 117.9 209 44.0
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 9.7e-25 117.9 246 41.9
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 1.3e-24 117.5 210 45.2
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 2.8e-24 116.3 125 59.2
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 3.7e-24 115.9 196 43.9
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 8.2e-24 114.8 218 42.2
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 2.4e-23 113.2 208 46.2
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 3.1e-23 112.8 214 44.9
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 5.3e-23 112.1 215 43.7
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 1.5e-22 110.5 199 44.2
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 1.5e-22 110.5 199 44.2
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 1.5e-22 110.5 200 43.5
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 2.0e-22 110.2 202 44.1
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 2.6e-22 109.8 195 45.6
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 2.6e-22 109.8 178 44.4
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 3.4e-22 109.4 202 43.6
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 3.4e-22 109.4 215 43.7
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 7.7e-22 108.2 200 43.0
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 3.2e-20 102.8 167 48.5
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 3.2e-20 102.8 167 48.5
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 7.9e-19 98.2 205 42.4
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 6.9e-15 85.1 88 55.7
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 7.7e-14 81.6 175 38.9
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 1.3e-13 80.9 105 53.3
AUR62036861 Chenopodium quinoa HOM05D005571 ORTHO05D006919 2.9e-13 79.7 191 35.1
Duzib128G0429 Durio zibethinus HOM05D005571 ORTHO05D006919 1.1e-12 77.8 103 49.5
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 1.4e-12 77.4 181 37.0
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 2.5e-12 76.6 179 38.0
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 1.8e-10 70.5 179 38.0
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 1.8e-10 70.5 179 38.0
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 1.8e-10 70.5 179 38.0
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 5.1e-10 68.9 193 37.3
Gohir.A02G084300 Gossypium hirsutum HOM05D005571 ORTHO05D006919 5.1e-10 68.9 146 40.4
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 4.4e-09 65.9 187 36.4
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 7.4e-09 65.1 140 37.1
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 7.4e-09 65.1 140 37.1
CDE04G0695 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 7.4e-09 65.1 187 33.2
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 2.2e-08 63.5 115 42.6
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 2.2e-08 63.5 115 42.6
ECA238G3056 Erigeron canadensis HOM05D002204 ORTHO05D002875 1.4e-07 60.8 105 42.9
Sabra11G0115000 Salix brachista HOM05D005571 ORTHO05D006919 1.8e-07 60.5 84 50.0
Sabra11G0115600 Salix brachista HOM05D005571 ORTHO05D006919 1.8e-07 60.5 84 50.0
HPP92_021048 Vanilla planifolia HOM05D005571 ORTHO05D006919 4.1e-07 59.3 209 34.0

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (5 genes)
Brassica napus (6 genes)
Brassica oleracea (2 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (3 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (0 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (1 genes)
Olea europaea (3 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (5 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings