Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029422 Camellia sinensis var. sinensis HOM05D005562 ORTHO05D111180 4.7e-91 337.8 165 100.0
CSS0049808 Camellia sinensis var. sinensis HOM05D005562 ORTHO05D007785 1.5e-17 93.6 132 43.9
vmacro19466 Vaccinium macrocarpon HOM05D005562 ORTHO05D007785 7.6e-17 91.3 131 43.5
vmacro23230 Vaccinium macrocarpon HOM05D005562 ORTHO05D007785 7.6e-17 91.3 131 43.5
Rhsim05G0079900 Rhododendron simsii HOM05D005562 ORTHO05D007785 2.2e-16 89.7 132 42.4
Dinv23596 Davidia involucrata HOM05D005562 ORTHO05D001378 5.5e-15 85.1 132 40.9
Hma1.2p1_0584F.1_g183170 Hydrangea macrophylla HOM05D005562 ORTHO05D007785 7.1e-15 84.7 132 40.9
Lj9A361T59 Lonicera japonica HOM05D005562 ORTHO05D007785 9.3e-15 84.3 94 51.1
AUR62042921 Chenopodium quinoa HOM05D005562 ORTHO05D007785 1.2e-14 84.0 93 51.6
Oeu057671.1 Olea europaea HOM05D005562 ORTHO05D007785 1.6e-14 83.6 94 51.1
PSO170G1474 Papaver somniferum HOM05D005562 ORTHO05D007785 2.7e-14 82.8 94 48.9
PGSC0003DMG401025903 Solanum tuberosum HOM05D005562 ORTHO05D007785 3.5e-14 82.4 93 50.5
PGSC0003DMG402025903 Solanum tuberosum HOM05D005562 ORTHO05D007785 3.5e-14 82.4 93 50.5
ATR0225G001 Amborella trichopoda HOM05D005562 ORTHO05D007785 4.6e-14 82.0 132 40.9
EL10Ac3g06682 Beta vulgaris HOM05D005562 ORTHO05D007785 4.6e-14 82.0 93 49.5
Peaxi162Scf00016g01531 Petunia axillaris HOM05D005562 ORTHO05D007785 4.6e-14 82.0 93 49.5
EL10Ac1g01621 Beta vulgaris HOM05D005562 ORTHO05D007785 7.9e-14 81.3 93 49.5
PSO210G1477 Papaver somniferum HOM05D005562 ORTHO05D007785 7.9e-14 81.3 94 47.9
GSVIVG01031808001 Vitis vinifera HOM05D005562 ORTHO05D007785 7.9e-14 81.3 94 50.0
MSTRG.5375 Avicennia marina HOM05D005562 ORTHO05D007785 1.0e-13 80.9 93 51.6
Solyc01g108660.4 Solanum lycopersicum HOM05D005562 ORTHO05D007785 1.0e-13 80.9 93 49.5
Migut.B00304 Erythranthe guttata HOM05D005562 ORTHO05D007785 1.3e-13 80.5 97 46.4
SalBow4G0329 Salvia bowleyana HOM05D005562 ORTHO05D007785 1.3e-13 80.5 93 50.5
CAN.G322.41 Capsicum annuum HOM05D005562 ORTHO05D007785 1.8e-13 80.1 93 49.5
Sopen01g050880 Solanum pennellii HOM05D005562 ORTHO05D007785 1.8e-13 80.1 93 49.5
unitig_26.g10242 Utricularia gibba HOM05D005562 ORTHO05D007785 1.8e-13 80.1 93 50.5
Ah.13g074710 Amaranthus hybridus HOM05D005562 ORTHO05D007785 2.3e-13 79.7 132 38.6
Cfa005417 Carpinus fangiana HOM05D005562 ORTHO05D007785 2.3e-13 79.7 132 38.6
Haze_01878 Corylus avellana HOM05D005562 ORTHO05D007785 2.3e-13 79.7 132 38.6
Os10g0494200 Oryza sativa ssp. japonica HOM05D005562 ORTHO05D007785 3.0e-13 79.3 93 47.3
Sc06g0001440 Simmondsia chinensis HOM05D005562 ORTHO05D007785 3.9e-13 79.0 94 47.9
Os03g0617900 Oryza sativa ssp. japonica HOM05D005562 ORTHO05D007785 5.1e-13 78.6 93 46.2
TAR625G0430 Trochodendron aralioides HOM05D005562 ORTHO05D007785 5.1e-13 78.6 93 47.3
AagrBONN_evm.TU.Sc2ySwM_117.3897 Anthoceros agrestis HOM05D005562 ORTHO05D007785 6.7e-13 78.2 105 43.8
SGA_v2.0_scaffold32G13119 Striga asiatica HOM05D005562 ORTHO05D007785 6.7e-13 78.2 93 48.4
Cc07_g19550 Coffea canephora HOM05D005562 ORTHO05D007785 8.7e-13 77.8 93 47.3
Aa31LG8G16860 Aethionema arabicum HOM05D005562 ORTHO05D007785 1.1e-12 77.4 95 48.4
CiPaw.05G055600 Carya illinoinensis HOM05D005562 ORTHO05D007785 1.1e-12 77.4 132 38.6
SalBow3G1434 Salvia bowleyana HOM05D005562 ORTHO05D007785 1.1e-12 77.4 93 48.4
TAR381G1284 Trochodendron aralioides HOM05D005562 ORTHO05D007785 1.1e-12 77.4 94 45.7
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 1.5e-12 77.0 94 46.8
Nitab4.5_0003726g0070 Nicotiana tabacum HOM05D005562 ORTHO05D007785 1.5e-12 77.0 93 48.4
Prupe.8G115600 Prunus persica HOM05D005562 ORTHO05D007785 1.5e-12 77.0 93 48.4
RcHm_v2.0_Chr6g0259381 Rosa chinensis HOM05D005562 ORTHO05D007785 1.5e-12 77.0 94 46.8
HPP92_018726 Vanilla planifolia HOM05D005562 ORTHO05D007785 1.5e-12 77.0 93 45.2
Aqoxy5G01421 Aquilegia oxysepala HOM05D005562 ORTHO05D007785 1.9e-12 76.6 132 37.9
Duzib248G1341 Durio zibethinus HOM05D005562 ORTHO05D007785 1.9e-12 76.6 94 46.8
FvH4_2g07021 Fragaria vesca HOM05D005562 ORTHO05D007785 1.9e-12 76.6 94 45.7
FAN24G3180 Fragaria x ananassa HOM05D005562 ORTHO05D001378 1.9e-12 76.6 94 45.7
MBI16_g19905_MAGBIO Magnolia biondii HOM05D005562 ORTHO05D007785 1.9e-12 76.6 94 45.7
MD00G1050500 Malus domestica HOM05D005562 ORTHO05D007785 1.9e-12 76.6 93 48.4
QL11p038618 Quercus lobata HOM05D005562 ORTHO05D007785 1.9e-12 76.6 94 45.7
Thecc.02G095000 Theobroma cacao HOM05D005562 ORTHO05D007785 1.9e-12 76.6 93 47.3
CDE01G0106 Ceratophyllum demersum HOM05D005562 ORTHO05D007785 2.5e-12 76.3 93 47.3
Pp3c24_19140 Physcomitrium patens HOM05D005562 ORTHO05D007785 2.5e-12 76.3 93 46.2
Sed0010996 Sechium edule HOM05D005562 ORTHO05D007785 2.5e-12 76.3 95 45.3
FAN27G1497 Fragaria x ananassa HOM05D005562 ORTHO05D007785 3.3e-12 75.9 94 45.7
Atru.chr5.2830 Acer truncatum HOM05D005562 ORTHO05D007785 4.3e-12 75.5 97 45.4
Ciclev10028560m.g Citrus clementina HOM05D005562 ORTHO05D007785 4.3e-12 75.5 97 45.4
Eucgr.I01182 Eucalyptus grandis HOM05D005562 ORTHO05D007785 4.3e-12 75.5 93 46.2
FAN27G3443 Fragaria x ananassa HOM05D005562 ORTHO05D001378 4.3e-12 75.5 94 45.7
MD10G1088500 Malus domestica HOM05D005562 ORTHO05D007785 4.3e-12 75.5 93 47.3
Manes.15G144000 Manihot esculenta HOM05D005562 ORTHO05D007785 4.3e-12 75.5 132 39.4
CsaV3_2G014210 Cucumis sativus L. HOM05D005562 ORTHO05D007785 5.6e-12 75.1 95 44.2
Nn1g04154 Nelumbo nucifera HOM05D005562 ORTHO05D007785 5.6e-12 75.1 93 45.2
ClCG09G017590 Citrullus lanatus HOM05D005562 ORTHO05D007785 7.4e-12 74.7 95 44.2
MELO3C021919.2 Cucumis melo HOM05D005562 ORTHO05D007785 7.4e-12 74.7 95 44.2
Gohir.D13G035800 Gossypium hirsutum HOM05D005562 ORTHO05D007785 9.6e-12 74.3 94 44.7
Gorai.013G040500 Gossypium raimondii HOM05D005562 ORTHO05D007785 9.6e-12 74.3 94 44.7
Lsat_1_v5_gn_9_108961 Lactuca sativa HOM05D005562 ORTHO05D007785 9.6e-12 74.3 93 45.2
Gohir.A13G037500 Gossypium hirsutum HOM05D005562 ORTHO05D007785 1.3e-11 73.9 93 45.2
Potri.004G145700 Populus trichocarpa HOM05D005562 ORTHO05D007785 1.6e-11 73.6 132 37.9
SMO116G0475 Selaginella moellendorffii HOM05D005562 ORTHO05D007785 1.6e-11 73.6 109 40.4
TWI79G1184 Tripterygium wilfordii HOM05D005562 ORTHO05D007785 1.6e-11 73.6 93 46.2
AT2G19940 Arabidopsis thaliana HOM05D005562 ORTHO05D007785 2.1e-11 73.2 95 45.3
Zm00001eb051410 Zea mays HOM05D005562 ORTHO05D007785 2.1e-11 73.2 93 44.1
DCAR_022068 Daucus carota HOM05D005562 ORTHO05D001378 2.8e-11 72.8 109 44.0
ECA240G1421 Erigeron canadensis HOM05D005562 ORTHO05D007785 2.8e-11 72.8 93 44.1
Mapoly0036s0058 Marchantia polymorpha HOM05D005562 ORTHO05D007785 2.8e-11 72.8 104 40.4
AL3G48260 Arabidopsis lyrata HOM05D005562 ORTHO05D007785 3.7e-11 72.4 95 44.2
CARHR110380 Cardamine hirsuta HOM05D005562 ORTHO05D007785 3.7e-11 72.4 95 44.2
Thhalv10002012m.g Eutrema salsugineum HOM05D005562 ORTHO05D007785 3.7e-11 72.4 95 44.2
HanXRQChr13g0402421 Helianthus annuus HOM05D005562 ORTHO05D007785 3.7e-11 72.4 93 45.2
HanXRQChr16g0528561 Helianthus annuus HOM05D005562 ORTHO05D007785 3.7e-11 72.4 93 45.2
Sp3g33250 Schrenkiella parvula HOM05D005562 ORTHO05D007785 3.7e-11 72.4 95 44.2
BcaC04g22480 Brassica carinata HOM05D005562 ORTHO05D007785 6.2e-11 71.6 95 44.2
A09p15570 Brassica napus HOM05D005562 ORTHO05D007785 6.2e-11 71.6 95 44.2
BolC9t54784H Brassica oleracea HOM05D005562 ORTHO05D007785 6.2e-11 71.6 95 44.2
BraA09t37197Z Brassica rapa HOM05D005562 ORTHO05D007785 6.2e-11 71.6 95 44.2
CANSAT25G3890 Cannabis sativa HOM05D005562 ORTHO05D007785 6.2e-11 71.6 94 44.7
Thhalv10023506m.g Eutrema salsugineum HOM05D005562 ORTHO05D007785 6.2e-11 71.6 95 43.2
Pp3c8_22120 Physcomitrium patens HOM05D005562 ORTHO05D007785 6.2e-11 71.6 93 44.1
PGR142G1983 Punica granatum HOM05D005562 ORTHO05D007785 8.1e-11 71.2 94 41.5
BcaB07g31395 Brassica carinata HOM05D005562 ORTHO05D007785 1.1e-10 70.9 95 44.2
FAN15G1080 Fragaria x ananassa HOM05D005562 ORTHO05D001378 1.4e-10 70.5 102 44.1
THA.LOC104814570 Tarenaya hassleriana HOM05D005562 ORTHO05D007785 1.4e-10 70.5 95 43.2
Carub.0003s3419 Capsella rubella HOM05D005562 ORTHO05D007785 1.8e-10 70.1 95 43.2
Nitab4.5_0001401g0050 Nicotiana tabacum HOM05D005562 ORTHO05D007785 2.4e-10 69.7 125 37.6
C09p18820 Brassica napus HOM05D005562 ORTHO05D007785 4.0e-10 68.9 95 43.2
Hund01581 Selenicereus undatus HOM05D005562 ORTHO05D007785 5.3e-10 68.6 113 40.7
C09p49210 Brassica napus HOM05D005562 ORTHO05D007785 6.9e-10 68.2 91 44.0
BolC9t57765H Brassica oleracea HOM05D005562 ORTHO05D007785 6.9e-10 68.2 91 44.0
Psat6g096120 Pisum sativum HOM05D005562 ORTHO05D007785 9.0e-10 67.8 94 40.4
TPR.G14865 Trifolium pratense HOM05D005562 ORTHO05D007785 9.0e-10 67.8 94 40.4
CBR_g5649 Chara braunii HOM05D005562 ORTHO05D001468 1.2e-09 67.4 93 39.8
TPR.G11154 Trifolium pratense HOM05D005562 ORTHO05D007785 1.2e-09 67.4 94 40.4
Glyma.20G009400 Glycine max HOM05D005562 ORTHO05D007785 1.5e-09 67.0 94 40.4
Medtr1g012540 Medicago truncatula HOM05D005562 ORTHO05D007785 1.5e-09 67.0 94 40.4
Ca_12473_v3 Cicer arietinum L. HOM05D005562 ORTHO05D007785 3.4e-09 65.9 94 39.4
VMungo1215G0206 Vigna mungo HOM05D005562 ORTHO05D007785 3.4e-09 65.9 94 41.5
Cre03.g146187 Chlamydomonas reinhardtii HOM05D005562 ORTHO05D007785 5.8e-09 65.1 107 37.4
Glyma.07G179700 Glycine max HOM05D005562 ORTHO05D007785 7.6e-09 64.7 94 39.4
Lj2g0016235 Lotus japonicus HOM05D005562 ORTHO05D007785 7.6e-09 64.7 94 38.3
arahy.Tifrunner.gnm1.ann1.4TQ1KW Arachis hypogaea HOM05D005562 ORTHO05D007785 1.0e-08 64.3 89 42.7
arahy.Tifrunner.gnm1.ann1.ZFI36T Arachis hypogaea HOM05D005562 ORTHO05D007785 1.0e-08 64.3 89 42.7
Lalb_Chr17g0338301 Lupinus albus HOM05D005562 ORTHO05D007785 1.3e-08 63.9 89 41.6
Phvul.003G012000 Phaseolus vulgaris HOM05D005562 ORTHO05D007785 1.3e-08 63.9 94 40.4
BcaC04g19978 Brassica carinata HOM05D005562 ORTHO05D007785 6.5e-08 61.6 108 37.0
PRCOL_00005741 Prasinoderma coloniale HOM05D005562 ORTHO05D007785 1.1e-07 60.8 94 36.2

Acer truncatum (1 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (2 genes)
Brassica carinata (3 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (0 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings