Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029007 Camellia sinensis var. sinensis HOM05D001340 ORTHO05D005342 9.2e-175 617.1 380 100.0
CSS0048014 Camellia sinensis var. sinensis HOM05D001340 ORTHO05D005342 8.9e-170 600.5 380 98.4
CSS0048085 Camellia sinensis var. sinensis HOM05D001340 ORTHO05D005342 2.6e-129 466.1 373 69.7
CSS0027854 Camellia sinensis var. sinensis HOM05D001340 ORTHO05D005342 1.1e-127 460.7 373 69.2
Rhsim11G0095300 Rhododendron simsii HOM05D001340 ORTHO05D005342 7.1e-119 431.4 376 66.2
vmacro01564 Vaccinium macrocarpon HOM05D001340 ORTHO05D005342 7.9e-102 374.8 377 59.2
Actinidia35521 Actinidia chinensis HOM05D001340 ORTHO05D005342 2.6e-100 369.8 325 65.2
Potri.013G008400 Populus trichocarpa HOM05D001340 ORTHO05D005342 2.0e-97 360.1 378 55.3
Cfa006706 Carpinus fangiana HOM05D001340 ORTHO05D002318 2.6e-97 359.8 378 55.0
Potri.005G014100 Populus trichocarpa HOM05D001340 ORTHO05D005342 2.6e-97 359.8 374 56.1
Hma1.2p1_0008F-1.1_g005585 Hydrangea macrophylla HOM05D001340 ORTHO05D005342 6.7e-93 345.1 371 55.0
Sabra13G0007100 Salix brachista HOM05D001340 ORTHO05D005342 9.7e-92 341.3 405 51.4
Lj5g0005524 Lotus japonicus HOM05D001340 ORTHO05D005342 1.3e-91 340.9 382 52.6
Cc02_g35070 Coffea canephora HOM05D001340 ORTHO05D005342 3.7e-91 339.3 379 53.6
Thecc.05G323400 Theobroma cacao HOM05D001340 ORTHO05D005342 6.3e-91 338.6 374 55.3
CiPaw.08G155200 Carya illinoinensis HOM05D001340 ORTHO05D005342 1.6e-89 334.0 380 52.6
Cpa.g.sc48.165 Carica papaya HOM05D001340 ORTHO05D005342 2.6e-89 333.2 362 51.9
Psat0s3278g0040 Pisum sativum HOM05D001340 ORTHO05D005342 1.0e-88 331.3 372 51.9
QL03p013901 Quercus lobata HOM05D001340 ORTHO05D005342 1.7e-88 330.5 378 53.7
TWI36G1129 Tripterygium wilfordii HOM05D001340 ORTHO05D005342 2.2e-88 330.1 372 52.4
Oeu000006.2 Olea europaea HOM05D001340 ORTHO05D005342 9.4e-87 324.7 374 54.8
Lj5C332T2 Lonicera japonica HOM05D001340 ORTHO05D005342 1.6e-86 323.9 390 52.3
Medtr1g084100 Medicago truncatula HOM05D001340 ORTHO05D005342 8.8e-85 318.2 373 50.9
GSVIVG01031244001 Vitis vinifera HOM05D001340 ORTHO05D002318 2.6e-84 316.6 376 52.4
Gorai.007G306700 Gossypium raimondii HOM05D001340 ORTHO05D005342 5.7e-84 315.5 377 52.0
arahy.Tifrunner.gnm1.ann1.Y2Y4QF Arachis hypogaea HOM05D001340 ORTHO05D005342 7.5e-84 315.1 373 49.6
Gohir.D11G283800 Gossypium hirsutum HOM05D001340 ORTHO05D005342 7.5e-84 315.1 377 52.0
DCAR_029350 Daucus carota HOM05D001340 ORTHO05D005342 4.8e-83 312.4 381 50.9
Manes.09G177200 Manihot esculenta HOM05D001340 ORTHO05D005342 1.8e-82 310.5 375 49.9
arahy.Tifrunner.gnm1.ann1.CI26SV Arachis hypogaea HOM05D001340 ORTHO05D005342 4.1e-82 309.3 377 49.3
Eucgr.L00263 Eucalyptus grandis HOM05D001340 ORTHO05D005342 9.1e-82 308.1 375 49.6
MSTRG.20379 Avicennia marina HOM05D001340 ORTHO05D005342 1.2e-81 307.8 375 51.7
Nn4g25585 Nelumbo nucifera HOM05D001340 ORTHO05D005342 3.5e-81 306.2 370 48.9
AT1G56440 Arabidopsis thaliana HOM05D001340 ORTHO05D005342 5.9e-81 305.4 394 47.7
Nitab4.5_0000155g0120 Nicotiana tabacum HOM05D001340 ORTHO05D005342 5.0e-80 302.4 366 51.6
Migut.B00963 Erythranthe guttata HOM05D001340 ORTHO05D005342 1.1e-79 301.2 366 51.1
TPR.G2618 Trifolium pratense HOM05D001340 ORTHO05D005342 2.5e-79 300.1 373 48.0
Aa31LG2G11470 Aethionema arabicum HOM05D001340 ORTHO05D005342 5.5e-79 298.9 395 46.8
MD12G1205500 Malus domestica HOM05D001340 ORTHO05D005342 9.4e-79 298.1 370 50.3
Sed0025878 Sechium edule HOM05D001340 ORTHO05D005342 2.7e-78 296.6 376 48.1
Lalb_Chr02g0147791 Lupinus albus HOM05D001340 ORTHO05D005342 3.6e-78 296.2 386 46.9
Ciclev10003914m.g Citrus clementina HOM05D001340 ORTHO05D002318 4.7e-78 295.8 376 49.2
RcHm_v2.0_Chr3g0457141 Rosa chinensis HOM05D001340 ORTHO05D005342 4.7e-78 295.8 378 48.7
Hund07313 Selenicereus undatus HOM05D001340 ORTHO05D005342 4.7e-78 295.8 375 47.5
SGA_v2.0_scaffold4G01971 Striga asiatica HOM05D001340 ORTHO05D005342 1.0e-77 294.7 387 50.1
MELO3C004179.2 Cucumis melo HOM05D001340 ORTHO05D005342 1.4e-77 294.3 374 48.7
COL.COLO4_05548 Corchorus olitorius HOM05D001340 ORTHO05D005342 1.8e-77 293.9 377 48.3
Phvul.007G201600 Phaseolus vulgaris HOM05D001340 ORTHO05D005342 1.8e-77 293.9 376 47.6
AL1G66140 Arabidopsis lyrata HOM05D001340 ORTHO05D005342 2.3e-77 293.5 372 48.9
CARHR055170 Cardamine hirsuta HOM05D001340 ORTHO05D005342 2.3e-77 293.5 395 46.6
Peaxi162Scf00595g00424 Petunia axillaris HOM05D001340 ORTHO05D005342 2.3e-77 293.5 369 50.4
Lj5g0009841 Lotus japonicus HOM05D001340 ORTHO05D005342 4.0e-77 292.7 387 47.5
VMungo0720G0959 Vigna mungo HOM05D001340 ORTHO05D005342 5.2e-77 292.4 380 47.6
FAN05G0225 Fragaria x ananassa HOM05D001340 ORTHO05D005342 8.8e-77 291.6 383 47.8
CsaV3_2G007140 Cucumis sativus L. HOM05D001340 ORTHO05D005342 1.2e-76 291.2 378 48.4
Atru.chr2.201 Acer truncatum HOM05D001340 ORTHO05D005342 2.6e-76 290.0 380 49.2
Sp2g06370 Schrenkiella parvula HOM05D001340 ORTHO05D005342 9.8e-76 288.1 394 45.2
A03p66580 Brassica napus HOM05D001340 ORTHO05D005342 1.3e-75 287.7 387 45.7
ClCG02G014870 Citrullus lanatus HOM05D001340 ORTHO05D005342 1.7e-75 287.3 375 49.1
FAN09G1839 Fragaria x ananassa HOM05D001340 ORTHO05D005342 1.7e-75 287.3 376 49.5
THA.LOC104816892 Tarenaya hassleriana HOM05D001340 ORTHO05D005342 1.7e-75 287.3 384 46.1
FAN14G4490 Fragaria x ananassa HOM05D001340 ORTHO05D005342 2.2e-75 287.0 376 49.2
Carub.0002s0770 Capsella rubella HOM05D001340 ORTHO05D005342 3.7e-75 286.2 371 47.7
BcaC02g10729 Brassica carinata HOM05D001340 ORTHO05D005342 4.8e-75 285.8 383 45.2
SalBow7G3618 Salvia bowleyana HOM05D001340 ORTHO05D005342 4.8e-75 285.8 366 49.7
BraA03t15714Z Brassica rapa HOM05D001340 ORTHO05D005342 6.3e-75 285.4 381 46.2
Dinv24447 Davidia involucrata HOM05D000961 ORTHO05D000841 8.3e-75 285.0 362 50.6
Sopen10g015810 Solanum pennellii HOM05D001340 ORTHO05D005342 8.3e-75 285.0 374 49.2
CANSAT54G2301 Cannabis sativa HOM05D001340 ORTHO05D005342 1.1e-74 284.6 374 46.5
Thhalv10023436m.g Eutrema salsugineum HOM05D001340 ORTHO05D005342 1.4e-74 284.3 395 45.1
Dinv30896 Davidia involucrata HOM05D000961 ORTHO05D000841 2.4e-74 283.5 395 47.1
TAR633G1496 Trochodendron aralioides HOM05D000961 ORTHO05D000841 2.4e-74 283.5 331 52.9
C04p27080 Brassica napus HOM05D001340 ORTHO05D005342 4.1e-74 282.7 378 45.5
BolC4t24084H Brassica oleracea HOM05D001340 ORTHO05D005342 4.1e-74 282.7 378 45.5
Ca_10175_v3 Cicer arietinum L. HOM05D001340 ORTHO05D005342 9.1e-74 281.6 372 45.7
Solyc10g045540.2 Solanum lycopersicum HOM05D001340 ORTHO05D005342 9.1e-74 281.6 376 48.7
FAN02G4226 Fragaria x ananassa HOM05D001340 ORTHO05D005342 1.2e-73 281.2 376 48.4
PSO170G0183 Papaver somniferum HOM05D001340 ORTHO05D005342 2.0e-73 280.4 373 46.6
HanXRQChr06g0173421 Helianthus annuus HOM05D001340 ORTHO05D005342 2.7e-73 280.0 367 48.5
Glyma.20G096900 Glycine max HOM05D001340 ORTHO05D005342 5.9e-73 278.9 371 45.8
Sabra05G0009600 Salix brachista HOM05D001340 ORTHO05D005342 5.9e-73 278.9 387 47.5
Glyma.10G146800 Glycine max HOM05D001340 ORTHO05D005342 2.9e-72 276.6 371 45.6
BcaB04g20162 Brassica carinata HOM05D001340 ORTHO05D005342 1.1e-71 274.6 375 44.8
Gohir.A11G273700 Gossypium hirsutum HOM05D001340 ORTHO05D005342 1.1e-71 274.6 342 51.5
PSO357G0240 Papaver somniferum HOM05D001340 ORTHO05D005342 9.5e-71 271.6 373 46.4
BolC1t03489H Brassica oleracea HOM05D001340 ORTHO05D005342 2.8e-70 270.0 407 43.0
MBI19_g40070_MAGBIO Magnolia biondii HOM05D001340 ORTHO05D005342 8.9e-69 265.0 388 43.3
BraA01t02887Z Brassica rapa HOM05D001340 ORTHO05D005342 2.6e-68 263.5 375 43.2
BcaC09g49556 Brassica carinata HOM05D001340 ORTHO05D005342 3.4e-68 263.1 373 45.6
C01p35320 Brassica napus HOM05D001340 ORTHO05D005342 3.4e-68 263.1 387 45.0
PGR083G1716 Punica granatum HOM05D001340 ORTHO05D005342 6.3e-67 258.8 374 44.1
A01p27480 Brassica napus HOM05D001340 ORTHO05D005342 2.4e-66 256.9 372 44.6
ATR0796G093 Amborella trichopoda HOM05D001340 ORTHO05D005342 4.1e-66 256.1 376 43.4
Ah.04g158660 Amaranthus hybridus HOM05D001340 ORTHO05D005342 1.2e-65 254.6 382 42.4
Lsat_1_v5_gn_9_121900 Lactuca sativa HOM05D001340 ORTHO05D005342 1.1e-63 248.1 361 45.2
Aqoxy7G01123 Aquilegia oxysepala HOM05D001340 ORTHO05D005342 8.0e-62 241.9 369 41.5
Duzib106G0021 Durio zibethinus HOM05D001340 ORTHO05D005342 8.0e-62 241.9 379 43.8
Sc09g0002630 Simmondsia chinensis HOM05D001340 ORTHO05D005342 8.0e-62 241.9 339 46.6
QL03p014779 Quercus lobata HOM05D001340 ORTHO05D005342 4.0e-61 239.6 156 75.6
Sabra05G0022300 Salix brachista HOM05D001340 ORTHO05D005342 4.0e-61 239.6 340 46.8
unitig_46.g18366 Utricularia gibba HOM05D001340 ORTHO05D005342 4.9e-59 232.6 373 43.2
Sabra05G0010800 Salix brachista HOM05D001340 ORTHO05D005342 8.3e-59 231.9 355 43.1
Glyma.20G097300 Glycine max HOM05D001340 ORTHO05D005342 3.2e-58 229.9 301 47.2
EL10Ac4g09460 Beta vulgaris HOM05D001340 ORTHO05D005342 7.0e-58 228.8 387 40.1
ECA233G1072 Erigeron canadensis HOM05D004203 ORTHO05D004830 1.3e-56 224.6 357 41.5
FvH4_6g07471 Fragaria vesca HOM05D001340 ORTHO05D005342 8.0e-54 215.3 314 46.5
Os05g0129900 Oryza sativa ssp. japonica HOM05D001340 ORTHO05D005342 1.8e-53 214.2 369 36.9
CDE01G0158 Ceratophyllum demersum HOM05D000961 ORTHO05D000841 2.3e-53 213.8 366 37.2
AUR62000388 Chenopodium quinoa HOM05D001340 ORTHO05D005342 1.2e-52 211.5 352 43.2
QL03p008601 Quercus lobata HOM05D001340 ORTHO05D005342 2.2e-51 207.2 165 64.2
HPP92_013522 Vanilla planifolia HOM05D001340 ORTHO05D005342 3.7e-51 206.5 367 38.4
AUR62006743 Chenopodium quinoa HOM05D001340 ORTHO05D005342 1.1e-50 204.9 339 42.2
CSS0004963 Camellia sinensis var. sinensis HOM05D001340 ORTHO05D005342 1.6e-49 201.1 121 89.3
RcHm_v2.0_Chr3g0457171 Rosa chinensis HOM05D001340 ORTHO05D005342 1.3e-48 198.0 312 44.6
QL03p008578 Quercus lobata HOM05D001340 ORTHO05D005342 6.2e-46 189.1 275 46.2
Zm00001eb354870 Zea mays HOM05D001340 ORTHO05D005342 6.8e-45 185.7 367 36.2
QL03p013877 Quercus lobata HOM05D001340 ORTHO05D005342 3.7e-43 179.9 156 62.2
Peaxi162Scf00750g00034 Petunia axillaris HOM05D001340 ORTHO05D005342 1.0e-40 171.8 375 39.2
Prupe.6G312500 Prunus persica HOM05D001340 ORTHO05D002318 1.0e-40 171.8 300 43.3
Prupe.3G076000 Prunus persica HOM05D001340 ORTHO05D005342 1.3e-40 171.4 151 60.3
Glyma.06G236676 Glycine max HOM05D000961 ORTHO05D005342 1.1e-37 161.8 281 40.2
SEGI_27730 Sequoiadendron giganteum HOM05D001340 ORTHO05D005342 4.0e-37 159.8 153 48.4
Sabra05G0021500 Salix brachista HOM05D001340 ORTHO05D005342 4.4e-36 156.4 102 73.5
QL03p014849 Quercus lobata HOM05D001340 ORTHO05D005342 2.9e-35 153.7 156 53.8
Pp3c24_17620 Physcomitrium patens HOM05D001340 ORTHO05D005342 8.4e-35 152.1 411 28.2
Mapoly0127s0050 Marchantia polymorpha HOM05D001340 ORTHO05D005342 2.4e-34 150.6 373 31.1
Sabra05G0010200 Salix brachista HOM05D001340 ORTHO05D005342 2.7e-33 147.1 392 33.9
TAR706G0001 Trochodendron aralioides HOM05D001340 ORTHO05D005342 1.0e-32 145.2 170 52.9
Gorai.009G392200 Gossypium raimondii HOM05D001340 ORTHO05D005342 1.7e-32 144.4 98 72.4
SMO119G0158 Selaginella moellendorffii HOM05D001340 ORTHO05D005342 1.5e-31 141.4 375 29.1
Gohir.D10G111266 Gossypium hirsutum HOM05D001340 ORTHO05D005342 7.3e-31 139.0 98 69.4
Nitab4.5_0007698g0020 Nicotiana tabacum HOM05D001340 ORTHO05D005342 6.4e-27 125.9 153 53.6
CAN.G1.66 Capsicum annuum HOM05D001340 ORTHO05D005342 4.3e-23 113.2 106 66.0
AagrBONN_evm.TU.Sc2ySwM_340.376 Anthoceros agrestis HOM05D001340 ORTHO05D005342 4.8e-22 109.8 366 24.9
QL03p013832 Quercus lobata HOM05D001340 ORTHO05D005342 1.8e-21 107.8 224 38.8
PSO541G4969 Papaver somniferum HOM05D001340 ORTHO05D005342 7.1e-18 95.9 69 71.0
QL03p014812 Quercus lobata HOM05D001340 ORTHO05D025918 1.6e-17 94.7 212 39.2
Nn1g02026 Nelumbo nucifera HOM05D001340 ORTHO05D005342 3.5e-17 93.6 57 82.5
CBR_g3787 Chara braunii HOM05D001340 ORTHO05D005342 6.0e-17 92.8 127 38.6
CBR_g48354 Chara braunii HOM05D001340 ORTHO05D005342 3.0e-16 90.5 127 37.8
CBR_g45761 Chara braunii HOM05D001340 ORTHO05D005342 8.7e-16 89.0 131 36.6
Gorai.005G157900 Gossypium raimondii HOM05D001340 ORTHO05D005342 1.5e-15 88.2 83 60.2
RcHm_v2.0_Chr3g0457161 Rosa chinensis HOM05D001340 ORTHO05D005342 4.0e-13 80.1 66 54.5
CBR_g18648 Chara braunii HOM05D001340 ORTHO05D005342 5.3e-13 79.7 369 25.5
Haze_04058 Corylus avellana HOM05D001340 ORTHO05D005342 2.6e-12 77.4 83 56.6
AUR62015660 Chenopodium quinoa HOM05D001340 ORTHO05D005342 1.3e-11 75.1 109 43.1
AUR62015688 Chenopodium quinoa HOM05D001340 ORTHO05D005342 3.8e-11 73.6 86 45.3
Cre02.g084900 Chlamydomonas reinhardtii HOM05D001340 ORTHO05D005342 8.4e-11 72.4 130 30.8
EL10Ac3g04962 Beta vulgaris HOM05D001340 ORTHO05D005342 1.1e-10 72.0 118 42.4
EL10Ac1g01661 Beta vulgaris HOM05D001340 ORTHO05D005342 1.9e-10 71.2 69 52.2
AUR62015693 Chenopodium quinoa HOM05D001340 ORTHO05D005342 1.9e-10 71.2 66 56.1
AUR62031620 Chenopodium quinoa HOM05D001340 ORTHO05D005342 3.2e-10 70.5 77 48.1
PRCOL_00000652 Prasinoderma coloniale HOM05D001340 ORTHO05D005342 7.9e-09 65.9 382 34.8
PGSC0003DMG400008293 Solanum tuberosum HOM05D001340 ORTHO05D005342 1.3e-06 58.5 64 54.7
SEGI_22675 Sequoiadendron giganteum HOM05D001310 ORTHO05D001283 4.8e-06 56.6 60 46.7

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (3 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (5 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (4 genes)
Chenopodium quinoa (6 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (4 genes)
Gossypium hirsutum (3 genes)
Gossypium raimondii (3 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (3 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (8 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (3 genes)
Salix brachista (6 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings